RNA–Protein interactions for RNA: ENST00000496458.1

SF3B1-212, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 475 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-212ENST00000496458 H0YIG0 161 aa4.14□□□□□ -1.75
SF3B1-212ENST00000496458 I3L1I5 382 aaPredicted RBP4.14□□□□□ -1.75
SF3B1-212ENST00000496458 M0QX08 132 aa4.14□□□□□ -1.75
SF3B1-212ENST00000496458 CCSO14618 274 aa4.14□□□□□ -1.75
SF3B1-212ENST00000496458 CTAGE5O15320 804 aa4.14□□□□□ -1.75
SF3B1-212ENST00000496458 CLDN3O15551 220 aa4.14□□□□□ -1.75
SF3B1-212ENST00000496458 LY6G6DO95868 133 aa4.14□□□□□ -1.75
SF3B1-212ENST00000496458 UQCRHP07919 91 aa4.14□□□□□ -1.75
SF3B1-212ENST00000496458 CD151P48509 253 aa4.14□□□□□ -1.75
SF3B1-212ENST00000496458 HMGCS2P54868 508 aa4.14□□□□□ -1.75
SF3B1-212ENST00000496458 CCDC173Q0VFZ6 552 aa4.14□□□□□ -1.75
SF3B1-212ENST00000496458 PDZK1IP1Q13113 114 aa4.14□□□□□ -1.75
SF3B1-212ENST00000496458 SLC17A1Q14916 467 aa4.14□□□□□ -1.75
SF3B1-212ENST00000496458 CEBPEQ15744 281 aa4.14□□□□□ -1.75
SF3B1-212ENST00000496458 RSBN1Q5VWQ0 802 aaPredicted RBP4.14□□□□□ -1.75
SF3B1-212ENST00000496458 CAPN13Q6MZZ7 669 aaPredicted RBP4.14□□□□□ -1.75
SF3B1-212ENST00000496458 PRSS42Q7Z5A4 293 aa4.14□□□□□ -1.75
SF3B1-212ENST00000496458 AMZ2Q86W34 360 aa4.14□□□□□ -1.75
SF3B1-212ENST00000496458 KRTAP11-1Q8IUC1 163 aa4.14□□□□□ -1.75
SF3B1-212ENST00000496458 SERPINA12Q8IW75 414 aa4.14□□□□□ -1.75
SF3B1-212ENST00000496458 CCDC83Q8IWF9 413 aa4.14□□□□□ -1.75
SF3B1-212ENST00000496458 ZCCHC7Q8N3Z6 543 aaKnown RBP4.14□□□□□ -1.75
SF3B1-212ENST00000496458 CCNYQ8ND76 341 aa4.14□□□□□ -1.75
SF3B1-212ENST00000496458 BEST4Q8NFU0 473 aa4.14□□□□□ -1.75
SF3B1-212ENST00000496458 FLVCR1-AS1Q8TAF5 88 aa4.14□□□□□ -1.75
SF3B1-212ENST00000496458 RNASE8Q8TDE3 154 aaKnown RBP4.14□□□□□ -1.75
SF3B1-212ENST00000496458 GANCQ8TET4 914 aa4.14□□□□□ -1.75
SF3B1-212ENST00000496458 MRPL24Q96A35 216 aaKnown RBP4.14□□□□□ -1.75
SF3B1-212ENST00000496458 NSMCE2Q96MF7 247 aa4.14□□□□□ -1.75
SF3B1-212ENST00000496458 ZIM3Q96PE6 472 aa4.14□□□□□ -1.75
SF3B1-212ENST00000496458 TPPP3Q9BW30 176 aa4.14□□□□□ -1.75
SF3B1-212ENST00000496458 TEX13AQ9BXU3 409 aaPredicted RBP4.14□□□□□ -1.75
SF3B1-212ENST00000496458 POLR1EQ9GZS1 481 aaKnown RBP4.14□□□□□ -1.75
SF3B1-212ENST00000496458 ZBP1Q9H171 429 aa4.14□□□□□ -1.75
SF3B1-212ENST00000496458 GORASP2Q9H8Y8 452 aa4.14□□□□□ -1.75
SF3B1-212ENST00000496458 GLRX2Q9NS18 164 aa4.14□□□□□ -1.75
SF3B1-212ENST00000496458 C6orf203Q9P0P8 240 aaPredicted RBP4.14□□□□□ -1.75
SF3B1-212ENST00000496458 KCNN3Q9UGI6 736 aa4.14□□□□□ -1.75
SF3B1-212ENST00000496458 MAD2L2Q9UI95 211 aa4.14□□□□□ -1.75
SF3B1-212ENST00000496458 CFAP45Q9UL16 551 aa4.14□□□□□ -1.75
SF3B1-212ENST00000496458 TRAF3IP3Q9Y228 551 aa4.14□□□□□ -1.75
SF3B1-212ENST00000496458 EXOC6BQ9Y2D4 811 aa4.14□□□□□ -1.75
SF3B1-212ENST00000496458 OR1A2Q9Y585 309 aa4.14□□□□□ -1.75
SF3B1-212ENST00000496458 UBR1Q8IWV7 1749 aa4.14□□□□□ -1.75
SF3B1-212ENST00000496458 UBE4BO95155 1302 aa4.14□□□□□ -1.75
SF3B1-212ENST00000496458 IBTKQ9P2D0 1353 aaPredicted RBP4.14□□□□□ -1.75
SF3B1-212ENST00000496458 SPHKAPQ2M3C7 1700 aa4.13□□□□□ -1.75
SF3B1-212ENST00000496458 A0A087X0K7 114 aa4.13□□□□□ -1.75
SF3B1-212ENST00000496458 ARHGAP42A6NI28 874 aa4.13□□□□□ -1.75
SF3B1-212ENST00000496458 L7N2F9 121 aa4.13□□□□□ -1.75
SF3B1-212ENST00000496458 E2F3O00716 465 aa4.13□□□□□ -1.75
SF3B1-212ENST00000496458 TTI1O43156 1089 aa4.13□□□□□ -1.75
SF3B1-212ENST00000496458 SYT7O43581 403 aa4.13□□□□□ -1.75
SF3B1-212ENST00000496458 NUDT21O43809 227 aaKnown RBP4.13□□□□□ -1.75
SF3B1-212ENST00000496458 SSX5O60225 188 aa4.13□□□□□ -1.75
SF3B1-212ENST00000496458 NME6O75414 186 aaPredicted RBP4.13□□□□□ -1.75
SF3B1-212ENST00000496458 RHBDL1O75783 438 aa4.13□□□□□ -1.75
SF3B1-212ENST00000496458 ASGR1P07306 291 aa4.13□□□□□ -1.75
SF3B1-212ENST00000496458 THRBP10828 461 aa4.13□□□□□ -1.75
SF3B1-212ENST00000496458 OR1D2P34982 312 aa4.13□□□□□ -1.75
SF3B1-212ENST00000496458 SERPINB6P35237 376 aa4.13□□□□□ -1.75
SF3B1-212ENST00000496458 MAGEB1P43366 347 aa4.13□□□□□ -1.75
SF3B1-212ENST00000496458 SERPINH1P50454 418 aaKnown RBP4.13□□□□□ -1.75
SF3B1-212ENST00000496458 METAP1P53582 386 aa4.13□□□□□ -1.75
SF3B1-212ENST00000496458 RPL27P61353 136 aaKnown RBP4.13□□□□□ -1.75
SF3B1-212ENST00000496458 GSTO1P78417 241 aa4.13□□□□□ -1.75
SF3B1-212ENST00000496458 C17orf58Q2M2W7 97 aa4.13□□□□□ -1.75
SF3B1-212ENST00000496458 EPC2Q52LR7 807 aa4.13□□□□□ -1.75
SF3B1-212ENST00000496458 ATAD3BQ5T9A4 648 aa4.13□□□□□ -1.75
SF3B1-212ENST00000496458 RAET1GQ6H3X3 334 aa4.13□□□□□ -1.75
SF3B1-212ENST00000496458 SNRNP48Q6IEG0 339 aaKnown RBP4.13□□□□□ -1.75
SF3B1-212ENST00000496458 OR6B2Q6IFH4 312 aa4.13□□□□□ -1.75
SF3B1-212ENST00000496458 CYP4V2Q6ZWL3 525 aaPredicted RBP4.13□□□□□ -1.75
SF3B1-212ENST00000496458 VASH2Q86V25 355 aa4.13□□□□□ -1.75
SF3B1-212ENST00000496458 SLC34A3Q8N130 599 aa4.13□□□□□ -1.75
SF3B1-212ENST00000496458 PDCL2Q8N4E4 241 aa4.13□□□□□ -1.75
SF3B1-212ENST00000496458 OR2T34Q8NGX1 318 aa4.13□□□□□ -1.75
SF3B1-212ENST00000496458 TCP11Q8WWU5 503 aa4.13□□□□□ -1.75
SF3B1-212ENST00000496458 ESAMQ96AP7 390 aa4.13□□□□□ -1.75
SF3B1-212ENST00000496458 PCED1BQ96HM7 432 aa4.13□□□□□ -1.75
SF3B1-212ENST00000496458 RAB40CQ96S21 281 aa4.13□□□□□ -1.75
SF3B1-212ENST00000496458 YTHDF1Q9BYJ9 559 aaKnown RBP4.13□□□□□ -1.75
SF3B1-212ENST00000496458 CLSTN2Q9H4D0 955 aa4.13□□□□□ -1.75
SF3B1-212ENST00000496458 RNPEPL1Q9HAU8 725 aa4.13□□□□□ -1.75
SF3B1-212ENST00000496458 TMEM161AQ9NX61 479 aa4.13□□□□□ -1.75
SF3B1-212ENST00000496458 DNPEPQ9ULA0 475 aa4.13□□□□□ -1.75
SF3B1-212ENST00000496458 DDX49Q9Y6V7 483 aaKnown RBP4.13□□□□□ -1.75
SF3B1-212ENST00000496458 TMEM2Q9UHN6 1383 aa4.13□□□□□ -1.75
SF3B1-212ENST00000496458 PTPRTO14522 1441 aa4.12□□□□□ -1.75
SF3B1-212ENST00000496458 POLR1AO95602 1720 aaPredicted RBP4.12□□□□□ -1.75
SF3B1-212ENST00000496458 PLA2R1Q13018 1463 aa4.12□□□□□ -1.75
SF3B1-212ENST00000496458 KIF1BO60333 1816 aa4.12□□□□□ -1.75
SF3B1-212ENST00000496458 PRRC2AP48634 2157 aaKnown RBP4.12□□□□□ -1.75
SF3B1-212ENST00000496458 ARPC4-TTLL3A0A0A6YYG9 625 aa4.12□□□□□ -1.75
SF3B1-212ENST00000496458 ATP6AP2A0A1C7CYW4 349 aa4.12□□□□□ -1.75
SF3B1-212ENST00000496458 FAM230AA0A1W2PPH8 454 aa4.12□□□□□ -1.75
SF3B1-212ENST00000496458 LRRIQ4A6NIV6 560 aa4.12□□□□□ -1.75
SF3B1-212ENST00000496458 CHUKO15111 745 aa4.12□□□□□ -1.75
SF3B1-212ENST00000496458 KIAA0513O60268 411 aa4.12□□□□□ -1.75
SF3B1-212ENST00000496458 ATP9AO75110 1047 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms