RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 DKKL1Q9UK85 242 aa12.95□□□□□ -0.34
VTI1A-209ENST00000496445 CBLCQ9ULV8 474 aa12.95□□□□□ -0.34
VTI1A-209ENST00000496445 FIS1Q9Y3D6 152 aa12.95□□□□□ -0.34
VTI1A-209ENST00000496445 NF1P21359 2839 aa12.95□□□□□ -0.34
VTI1A-209ENST00000496445 MED13LQ71F56 2210 aa12.94□□□□□ -0.34
VTI1A-209ENST00000496445 CLCA1A8K7I4 914 aa12.94□□□□□ -0.34
VTI1A-209ENST00000496445 H0Y3Z8 333 aa12.94□□□□□ -0.34
VTI1A-209ENST00000496445 SLC28A1O00337 649 aa12.94□□□□□ -0.34
VTI1A-209ENST00000496445 RGS14O43566 566 aa12.94□□□□□ -0.34
VTI1A-209ENST00000496445 SCO2O43819 266 aa12.94□□□□□ -0.34
VTI1A-209ENST00000496445 FADS1O60427 444 aa12.94□□□□□ -0.34
VTI1A-209ENST00000496445 ZIC3O60481 467 aa12.94□□□□□ -0.34
VTI1A-209ENST00000496445 CTAG2O75638 210 aa12.94□□□□□ -0.34
VTI1A-209ENST00000496445 CHRNGP07510 517 aa12.94□□□□□ -0.34
VTI1A-209ENST00000496445 IFI6P09912 130 aa12.94□□□□□ -0.34
VTI1A-209ENST00000496445 NUDT17P0C025 328 aa12.94□□□□□ -0.34
VTI1A-209ENST00000496445 TCEA1P23193 301 aaKnown RBP12.94□□□□□ -0.34
VTI1A-209ENST00000496445 CTSSP25774 331 aa12.94□□□□□ -0.34
VTI1A-209ENST00000496445 ALDH3A1P30838 453 aa12.94□□□□□ -0.34
VTI1A-209ENST00000496445 GCKP35557 465 aa12.94□□□□□ -0.34
VTI1A-209ENST00000496445 KIR2DL3P43628 341 aa12.94□□□□□ -0.34
VTI1A-209ENST00000496445 RPL38P63173 70 aaKnown RBP12.94□□□□□ -0.34
VTI1A-209ENST00000496445 SRYQ05066 204 aa12.94□□□□□ -0.34
VTI1A-209ENST00000496445 GAB1Q13480 694 aa12.94□□□□□ -0.34
VTI1A-209ENST00000496445 RCAN2Q14206 197 aa12.94□□□□□ -0.34
VTI1A-209ENST00000496445 CYP27C1Q4G0S4 372 aa12.94□□□□□ -0.34
VTI1A-209ENST00000496445 ZNF551Q7Z340 670 aaPredicted RBP12.94□□□□□ -0.34
VTI1A-209ENST00000496445 CLHC1Q8NHS4 586 aa12.94□□□□□ -0.34
VTI1A-209ENST00000496445 ZNF764Q96H86 408 aaPredicted RBP12.94□□□□□ -0.34
VTI1A-209ENST00000496445 SFXN2Q96NB2 322 aa12.94□□□□□ -0.34
VTI1A-209ENST00000496445 FAM111AQ96PZ2 611 aa12.94□□□□□ -0.34
VTI1A-209ENST00000496445 UCN2Q96RP3 112 aa12.94□□□□□ -0.34
VTI1A-209ENST00000496445 CCT7Q99832 543 aa12.94□□□□□ -0.34
VTI1A-209ENST00000496445 GPATCH1Q9BRR8 931 aaKnown RBP12.94□□□□□ -0.34
VTI1A-209ENST00000496445 MECRQ9BV79 373 aa12.94□□□□□ -0.34
VTI1A-209ENST00000496445 SLC17A7Q9P2U7 560 aa12.94□□□□□ -0.34
VTI1A-209ENST00000496445 RPH3AQ9Y2J0 694 aaPredicted RBP12.94□□□□□ -0.34
VTI1A-209ENST00000496445 MRPS18CQ9Y3D5 142 aaKnown RBP12.94□□□□□ -0.34
VTI1A-209ENST00000496445 DNAJC15Q9Y5T4 150 aa12.94□□□□□ -0.34
VTI1A-209ENST00000496445 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.93□□□□□ -0.34
VTI1A-209ENST00000496445 TLDC2A0PJX2 215 aa12.93□□□□□ -0.34
VTI1A-209ENST00000496445 FAM221AA4D161 298 aa12.93□□□□□ -0.34
VTI1A-209ENST00000496445 LSM1O15116 133 aaKnown RBP12.93□□□□□ -0.34
VTI1A-209ENST00000496445 PDPK1O15530 556 aa12.93□□□□□ -0.34
VTI1A-209ENST00000496445 TRIM13O60858 407 aa12.93□□□□□ -0.34
VTI1A-209ENST00000496445 IL18BPO95998 194 aa12.93□□□□□ -0.34
VTI1A-209ENST00000496445 LINC00032P0C843 101 aa12.93□□□□□ -0.34
VTI1A-209ENST00000496445 TMIGD3P0DMS9 266 aaPredicted RBP12.93□□□□□ -0.34
VTI1A-209ENST00000496445 NEFHP12036 1026 aa12.93□□□□□ -0.34
VTI1A-209ENST00000496445 ZNF708P17019 499 aa12.93□□□□□ -0.34
VTI1A-209ENST00000496445 DPP4P27487 766 aa12.93□□□□□ -0.34
VTI1A-209ENST00000496445 DNAJA1P31689 397 aaKnown RBP12.93□□□□□ -0.34
VTI1A-209ENST00000496445 ARRB2P32121 409 aa12.93□□□□□ -0.34
VTI1A-209ENST00000496445 MRPS22P82650 360 aaKnown RBP12.93□□□□□ -0.34
VTI1A-209ENST00000496445 HSPB3Q12988 150 aa12.93□□□□□ -0.34
VTI1A-209ENST00000496445 PDE7AQ13946 482 aa12.93□□□□□ -0.34
VTI1A-209ENST00000496445 FLYWCH1Q4VC44 716 aa12.93□□□□□ -0.34
VTI1A-209ENST00000496445 RFTN2Q52LD8 501 aaPredicted RBP12.93□□□□□ -0.34
VTI1A-209ENST00000496445 ENPP6Q6UWR7 440 aa12.93□□□□□ -0.34
VTI1A-209ENST00000496445 SPNS3Q6ZMD2 512 aa12.93□□□□□ -0.34
VTI1A-209ENST00000496445 OR2M3Q8NG83 312 aa12.93□□□□□ -0.34
VTI1A-209ENST00000496445 OR4K17Q8NGC6 315 aa12.93□□□□□ -0.34
VTI1A-209ENST00000496445 HOXB13Q92826 284 aaPredicted RBP12.93□□□□□ -0.34
VTI1A-209ENST00000496445 GIMAP5Q96F15 307 aa12.93□□□□□ -0.34
VTI1A-209ENST00000496445 TSSK3Q96PN8 268 aa12.93□□□□□ -0.34
VTI1A-209ENST00000496445 TRMOQ9BU70 441 aa12.93□□□□□ -0.34
VTI1A-209ENST00000496445 DSN1Q9H410 356 aa12.93□□□□□ -0.34
VTI1A-209ENST00000496445 Q9N2J8 555 aa12.93□□□□□ -0.34
VTI1A-209ENST00000496445 FAM120CQ9NX05 1096 aaKnown RBP12.93□□□□□ -0.34
VTI1A-209ENST00000496445 DNAJB12Q9NXW2 375 aaKnown RBP12.93□□□□□ -0.34
VTI1A-209ENST00000496445 PPP4R1LQ9P1A2 415 aa12.93□□□□□ -0.34
VTI1A-209ENST00000496445 LGALS13Q9UHV8 139 aa12.93□□□□□ -0.34
VTI1A-209ENST00000496445 ABCG2Q9UNQ0 655 aa12.93□□□□□ -0.34
VTI1A-209ENST00000496445 MTORP42345 2549 aa12.92□□□□□ -0.34
VTI1A-209ENST00000496445 GXYLT2A0PJZ3 443 aa12.92□□□□□ -0.34
VTI1A-209ENST00000496445 EEF1E1-BLOC1S5C9J1V9 151 aa12.92□□□□□ -0.34
VTI1A-209ENST00000496445 EEF1E1O43324 174 aaKnown RBP12.92□□□□□ -0.34
VTI1A-209ENST00000496445 AKAP10O43572 662 aa12.92□□□□□ -0.34
VTI1A-209ENST00000496445 HCRTR2O43614 444 aa12.92□□□□□ -0.34
VTI1A-209ENST00000496445 NPHS1O60500 1241 aa12.92□□□□□ -0.34
VTI1A-209ENST00000496445 TBX19O60806 448 aa12.92□□□□□ -0.34
VTI1A-209ENST00000496445 SPAG7O75391 227 aa12.92□□□□□ -0.34
VTI1A-209ENST00000496445 RCBTB2O95199 551 aa12.92□□□□□ -0.34
VTI1A-209ENST00000496445 IL33O95760 270 aa12.92□□□□□ -0.34
VTI1A-209ENST00000496445 IGKV1D-16P01601 117 aa12.92□□□□□ -0.34
VTI1A-209ENST00000496445 CHMP24386 653 aa12.92□□□□□ -0.34
VTI1A-209ENST00000496445 OPRM1P35372 400 aa12.92□□□□□ -0.34
VTI1A-209ENST00000496445 PEX19P40855 299 aa12.92□□□□□ -0.34
VTI1A-209ENST00000496445 MAP3K8P41279 467 aa12.92□□□□□ -0.34
VTI1A-209ENST00000496445 FRKP42685 505 aaPredicted RBP12.92□□□□□ -0.34
VTI1A-209ENST00000496445 DGKQP52824 942 aa12.92□□□□□ -0.34
VTI1A-209ENST00000496445 DSCR4P56555 118 aaPredicted RBP12.92□□□□□ -0.34
VTI1A-209ENST00000496445 STX5Q13190 355 aa12.92□□□□□ -0.34
VTI1A-209ENST00000496445 DECR1Q16698 335 aa12.92□□□□□ -0.34
VTI1A-209ENST00000496445 UGT3A2Q3SY77 523 aa12.92□□□□□ -0.34
VTI1A-209ENST00000496445 GALNTL6Q49A17 601 aa12.92□□□□□ -0.34
VTI1A-209ENST00000496445 AAGABQ6PD74 315 aa12.92□□□□□ -0.34
VTI1A-209ENST00000496445 RIBC1Q8N443 379 aaPredicted RBP12.92□□□□□ -0.34
VTI1A-209ENST00000496445 AENQ8WTP8 325 aaKnown RBP12.92□□□□□ -0.34
VTI1A-209ENST00000496445 TWIST2Q8WVJ9 160 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms