RNA–Protein interactions for RNA: ENST00000496215.5

COL9A2-211, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-211ENST00000496215 CDRT4Q8N9R6 151 aa18.82■□□□□ 0.6
COL9A2-211ENST00000496215 CA5BP1Q8WTZ4 195 aa18.82■□□□□ 0.6
COL9A2-211ENST00000496215 RNF138Q8WVD3 245 aa18.82■□□□□ 0.6
COL9A2-211ENST00000496215 RND1Q92730 232 aa18.82■□□□□ 0.6
COL9A2-211ENST00000496215 CHST11Q9NPF2 352 aa18.82■□□□□ 0.6
COL9A2-211ENST00000496215 ABCG2Q9UNQ0 655 aa18.82■□□□□ 0.6
COL9A2-211ENST00000496215 PCDHGB3Q9Y5G1 929 aa18.82■□□□□ 0.6
COL9A2-211ENST00000496215 FAM215AQ9Y5M1 114 aa18.82■□□□□ 0.6
COL9A2-211ENST00000496215 PHF3Q92576 2039 aaKnown RBP18.82■□□□□ 0.6
COL9A2-211ENST00000496215 ABCA12Q86UK0 2595 aa18.82■□□□□ 0.6
COL9A2-211ENST00000496215 SCO2O43819 266 aa18.81■□□□□ 0.6
COL9A2-211ENST00000496215 IL33O95760 270 aa18.81■□□□□ 0.6
COL9A2-211ENST00000496215 FREM3P0C091 2139 aa18.81■□□□□ 0.6
COL9A2-211ENST00000496215 GABRA1P14867 456 aa18.81■□□□□ 0.6
COL9A2-211ENST00000496215 GABRA3P34903 492 aa18.81■□□□□ 0.6
COL9A2-211ENST00000496215 GCKP35557 465 aa18.81■□□□□ 0.6
COL9A2-211ENST00000496215 SLC18A1P54219 525 aa18.81■□□□□ 0.6
COL9A2-211ENST00000496215 NUP107P57740 925 aa18.81■□□□□ 0.6
COL9A2-211ENST00000496215 CRYZQ08257 329 aaKnown RBP18.81■□□□□ 0.6
COL9A2-211ENST00000496215 GAB1Q13480 694 aa18.81■□□□□ 0.6
COL9A2-211ENST00000496215 EIPR1Q53HC9 387 aa18.81■□□□□ 0.6
COL9A2-211ENST00000496215 WIPI1Q5MNZ9 446 aaPredicted RBP18.81■□□□□ 0.6
COL9A2-211ENST00000496215 SP5Q6BEB4 398 aaPredicted RBP18.81■□□□□ 0.6
COL9A2-211ENST00000496215 PLCZ1Q86YW0 608 aa18.81■□□□□ 0.6
COL9A2-211ENST00000496215 FAM83FQ8NEG4 500 aaPredicted RBP18.81■□□□□ 0.6
COL9A2-211ENST00000496215 FBXO30Q8TB52 745 aa18.81■□□□□ 0.6
COL9A2-211ENST00000496215 GPR151Q8TDV0 419 aa18.81■□□□□ 0.6
COL9A2-211ENST00000496215 ASB5Q8WWX0 329 aa18.81■□□□□ 0.6
COL9A2-211ENST00000496215 SLC9A6Q92581 669 aa18.81■□□□□ 0.6
COL9A2-211ENST00000496215 RMND5BQ96G75 393 aaPredicted RBP18.81■□□□□ 0.6
COL9A2-211ENST00000496215 NUF2Q9BZD4 464 aa18.81■□□□□ 0.6
COL9A2-211ENST00000496215 AKTIPQ9H8T0 292 aa18.81■□□□□ 0.6
COL9A2-211ENST00000496215 ZCCHC3Q9NUD5 404 aaKnown RBP18.81■□□□□ 0.6
COL9A2-211ENST00000496215 NTMQ9P121 344 aa18.81■□□□□ 0.6
COL9A2-211ENST00000496215 GIMAP1-GIMAP5A0A087WTJ2 511 aa18.8■□□□□ 0.6
COL9A2-211ENST00000496215 C19orf84I3L1E1 186 aa18.8■□□□□ 0.6
COL9A2-211ENST00000496215 CBR3O75828 277 aa18.8■□□□□ 0.6
COL9A2-211ENST00000496215 HOXD4P09016 255 aaPredicted RBP18.8■□□□□ 0.6
COL9A2-211ENST00000496215 PRF1P14222 555 aa18.8■□□□□ 0.6
COL9A2-211ENST00000496215 CHRNB4P30926 498 aa18.8■□□□□ 0.6
COL9A2-211ENST00000496215 C21orf58P58505 322 aa18.8■□□□□ 0.6
COL9A2-211ENST00000496215 PMPCAQ10713 525 aa18.8■□□□□ 0.6
COL9A2-211ENST00000496215 NHSL2Q5HYW2 709 aa18.8■□□□□ 0.6
COL9A2-211ENST00000496215 MFSD12Q6NUT3 480 aa18.8■□□□□ 0.6
COL9A2-211ENST00000496215 RIMKLAQ8IXN7 391 aa18.8■□□□□ 0.6
COL9A2-211ENST00000496215 ULK2Q8IYT8 1036 aa18.8■□□□□ 0.6
COL9A2-211ENST00000496215 WDSUB1Q8N9V3 476 aa18.8■□□□□ 0.6
COL9A2-211ENST00000496215 OR14L1PQ8NHC6 308 aa18.8■□□□□ 0.6
COL9A2-211ENST00000496215 RAB3IL1Q8TBN0 382 aa18.8■□□□□ 0.6
COL9A2-211ENST00000496215 PIK3R3Q92569 461 aa18.8■□□□□ 0.6
COL9A2-211ENST00000496215 HOXB13Q92826 284 aaPredicted RBP18.8■□□□□ 0.6
COL9A2-211ENST00000496215 FAM120BQ96EK7 910 aaKnown RBP18.8■□□□□ 0.6
COL9A2-211ENST00000496215 GIMAP5Q96F15 307 aa18.8■□□□□ 0.6
COL9A2-211ENST00000496215 TTYH2Q9BSA4 534 aa18.8■□□□□ 0.6
COL9A2-211ENST00000496215 BHLHE41Q9C0J9 482 aaPredicted RBP18.8■□□□□ 0.6
COL9A2-211ENST00000496215 OR2B2Q9GZK3 357 aa18.8■□□□□ 0.6
COL9A2-211ENST00000496215 NEUROD4Q9HD90 331 aa18.8■□□□□ 0.6
COL9A2-211ENST00000496215 SIRT3Q9NTG7 399 aaPredicted RBP18.8■□□□□ 0.6
COL9A2-211ENST00000496215 FAM120CQ9NX05 1096 aaKnown RBP18.8■□□□□ 0.6
COL9A2-211ENST00000496215 ALKBH4Q9NXW9 302 aa18.8■□□□□ 0.6
COL9A2-211ENST00000496215 PPP4R1LQ9P1A2 415 aa18.8■□□□□ 0.6
COL9A2-211ENST00000496215 RNF6Q9Y252 685 aa18.8■□□□□ 0.6
COL9A2-211ENST00000496215 SLC6A5Q9Y345 797 aa18.8■□□□□ 0.6
COL9A2-211ENST00000496215 SNX8Q9Y5X2 465 aa18.8■□□□□ 0.6
COL9A2-211ENST00000496215 GXYLT2A0PJZ3 443 aa18.79■□□□□ 0.6
COL9A2-211ENST00000496215 HNRNPRO43390 633 aaKnown RBP18.79■□□□□ 0.6
COL9A2-211ENST00000496215 NKX2-2O95096 273 aa18.79■□□□□ 0.6
COL9A2-211ENST00000496215 PTGER4P35408 488 aa18.79■□□□□ 0.6
COL9A2-211ENST00000496215 PRIM2P49643 509 aa18.79■□□□□ 0.6
COL9A2-211ENST00000496215 CLDN8P56748 225 aa18.79■□□□□ 0.6
COL9A2-211ENST00000496215 LSM12Q3MHD2 195 aaKnown RBP18.79■□□□□ 0.6
COL9A2-211ENST00000496215 SPDYE7PQ495Y7 208 aa18.79■□□□□ 0.6
COL9A2-211ENST00000496215 ATG16L1Q676U5 607 aa18.79■□□□□ 0.6
COL9A2-211ENST00000496215 RTL6Q6ICC9 239 aa18.79■□□□□ 0.6
COL9A2-211ENST00000496215 YRDCQ86U90 279 aaKnown RBP18.79■□□□□ 0.6
COL9A2-211ENST00000496215 TRIM42Q8IWZ5 723 aa18.79■□□□□ 0.6
COL9A2-211ENST00000496215 PM20D2Q8IYS1 436 aa18.79■□□□□ 0.6
COL9A2-211ENST00000496215 LRRC34Q8IZ02 419 aa18.79■□□□□ 0.6
COL9A2-211ENST00000496215 OR5P2Q8WZ92 322 aa18.79■□□□□ 0.6
COL9A2-211ENST00000496215 JADE3Q92613 823 aa18.79■□□□□ 0.6
COL9A2-211ENST00000496215 COQ8BQ96D53 544 aa18.79■□□□□ 0.6
COL9A2-211ENST00000496215 DUSP26Q9BV47 211 aa18.79■□□□□ 0.6
COL9A2-211ENST00000496215 MEAF6Q9HAF1 191 aa18.79■□□□□ 0.6
COL9A2-211ENST00000496215 PNPOQ9NVS9 261 aa18.79■□□□□ 0.6
COL9A2-211ENST00000496215 DKKL1Q9UK85 242 aa18.79■□□□□ 0.6
COL9A2-211ENST00000496215 FAM47E-STBD1D6RA91 191 aa18.78■□□□□ 0.6
COL9A2-211ENST00000496215 C6orf47O95873 294 aa18.78■□□□□ 0.6
COL9A2-211ENST00000496215 GLI4P10075 376 aa18.78■□□□□ 0.6
COL9A2-211ENST00000496215 ACP2P11117 423 aa18.78■□□□□ 0.6
COL9A2-211ENST00000496215 SRD5A2P31213 254 aa18.78■□□□□ 0.6
COL9A2-211ENST00000496215 MAP3K8P41279 467 aa18.78■□□□□ 0.6
COL9A2-211ENST00000496215 CLK3P49761 638 aaKnown RBP18.78■□□□□ 0.6
COL9A2-211ENST00000496215 GAS1P54826 345 aa18.78■□□□□ 0.6
COL9A2-211ENST00000496215 DIO3P55073 304 aa18.78■□□□□ 0.6
COL9A2-211ENST00000496215 STX5Q13190 355 aa18.78■□□□□ 0.6
COL9A2-211ENST00000496215 AGBL2Q5U5Z8 902 aa18.78■□□□□ 0.6
COL9A2-211ENST00000496215 VASNQ6EMK4 673 aa18.78■□□□□ 0.6
COL9A2-211ENST00000496215 ZCCHC12Q6PEW1 402 aa18.78■□□□□ 0.6
COL9A2-211ENST00000496215 CAMKMTQ7Z624 323 aa18.78■□□□□ 0.6
COL9A2-211ENST00000496215 IFNEQ86WN2 208 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms