RNA–Protein interactions for RNA: ENST00000495835.1

HLA-C-209, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,073 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-209ENST00000495835 GFRA1P56159 465 aa22.03■■□□□ 1.12
HLA-C-209ENST00000495835 RPL38P63173 70 aaKnown RBP22.03■■□□□ 1.12
HLA-C-209ENST00000495835 GAB1Q13480 694 aa22.03■■□□□ 1.12
HLA-C-209ENST00000495835 VPS26BQ4G0F5 336 aa22.03■■□□□ 1.12
HLA-C-209ENST00000495835 DDIASQ8IXT1 998 aa22.03■■□□□ 1.12
HLA-C-209ENST00000495835 TNIP2Q8NFZ5 429 aa22.03■■□□□ 1.12
HLA-C-209ENST00000495835 OR6Y1Q8NGX8 325 aa22.03■■□□□ 1.12
HLA-C-209ENST00000495835 MBD3L2Q8NHZ7 208 aaPredicted RBP22.03■■□□□ 1.12
HLA-C-209ENST00000495835 HOXB13Q92826 284 aaPredicted RBP22.03■■□□□ 1.12
HLA-C-209ENST00000495835 UCN2Q96RP3 112 aa22.03■■□□□ 1.12
HLA-C-209ENST00000495835 MECRQ9BV79 373 aa22.03■■□□□ 1.12
HLA-C-209ENST00000495835 TAS2R10Q9NYW0 307 aa22.03■■□□□ 1.12
HLA-C-209ENST00000495835 FOXD3Q9UJU5 478 aaPredicted RBP22.03■■□□□ 1.12
HLA-C-209ENST00000495835 BPGMP07738 259 aa22.02■■□□□ 1.12
HLA-C-209ENST00000495835 EVI2BP34910 448 aa22.02■■□□□ 1.12
HLA-C-209ENST00000495835 CLK3P49761 638 aaKnown RBP22.02■■□□□ 1.12
HLA-C-209ENST00000495835 DSCR4P56555 118 aaPredicted RBP22.02■■□□□ 1.12
HLA-C-209ENST00000495835 MLC1Q15049 377 aa22.02■■□□□ 1.12
HLA-C-209ENST00000495835 FBXL19-AS1Q494R0 122 aa22.02■■□□□ 1.12
HLA-C-209ENST00000495835 SH2D4BQ5SQS7 431 aa22.02■■□□□ 1.12
HLA-C-209ENST00000495835 CES4AQ5XG92 561 aa22.02■■□□□ 1.12
HLA-C-209ENST00000495835 WDR53Q7Z5U6 358 aaPredicted RBP22.02■■□□□ 1.12
HLA-C-209ENST00000495835 TRIM42Q8IWZ5 723 aa22.02■■□□□ 1.12
HLA-C-209ENST00000495835 NATD1Q8N6N6 113 aa22.02■■□□□ 1.12
HLA-C-209ENST00000495835 GFM2Q969S9 779 aaKnown RBP22.02■■□□□ 1.12
HLA-C-209ENST00000495835 ZFP3Q96NJ6 502 aa22.02■■□□□ 1.12
HLA-C-209ENST00000495835 TSSK3Q96PN8 268 aa22.02■■□□□ 1.12
HLA-C-209ENST00000495835 FAM120CQ9NX05 1096 aaKnown RBP22.02■■□□□ 1.12
HLA-C-209ENST00000495835 PIP5K1BO14986 540 aa22.01■■□□□ 1.11
HLA-C-209ENST00000495835 IL18BPO95998 194 aa22.01■■□□□ 1.11
HLA-C-209ENST00000495835 TUBBP07437 444 aa22.01■■□□□ 1.11
HLA-C-209ENST00000495835 BCKDHAP12694 445 aa22.01■■□□□ 1.11
HLA-C-209ENST00000495835 GPC1P35052 558 aa22.01■■□□□ 1.11
HLA-C-209ENST00000495835 MAP3K8P41279 467 aa22.01■■□□□ 1.11
HLA-C-209ENST00000495835 MANFP55145 182 aaKnown RBP22.01■■□□□ 1.11
HLA-C-209ENST00000495835 BCL2A1Q16548 175 aa22.01■■□□□ 1.11
HLA-C-209ENST00000495835 GALNTL6Q49A17 601 aa22.01■■□□□ 1.11
HLA-C-209ENST00000495835 XKR7Q5GH72 579 aa22.01■■□□□ 1.11
HLA-C-209ENST00000495835 DCST1Q5T197 706 aa22.01■■□□□ 1.11
HLA-C-209ENST00000495835 ZCCHC12Q6PEW1 402 aa22.01■■□□□ 1.11
HLA-C-209ENST00000495835 ZNF551Q7Z340 670 aaPredicted RBP22.01■■□□□ 1.11
HLA-C-209ENST00000495835 TRIB1Q96RU8 372 aa22.01■■□□□ 1.11
HLA-C-209ENST00000495835 SSU72Q9NP77 194 aaKnown RBP22.01■■□□□ 1.11
HLA-C-209ENST00000495835 SH3BP4Q9P0V3 963 aa22.01■■□□□ 1.11
HLA-C-209ENST00000495835 FBXL2Q9UKC9 423 aa22.01■■□□□ 1.11
HLA-C-209ENST00000495835 LINC01387J3KSC0 135 aa22■■□□□ 1.11
HLA-C-209ENST00000495835 KCNH1O95259 989 aa22■■□□□ 1.11
HLA-C-209ENST00000495835 DPP4P27487 766 aa22■■□□□ 1.11
HLA-C-209ENST00000495835 ETV4P43268 484 aa22■■□□□ 1.11
HLA-C-209ENST00000495835 ASCL1P50553 236 aa22■■□□□ 1.11
HLA-C-209ENST00000495835 HSPB3Q12988 150 aa22■■□□□ 1.11
HLA-C-209ENST00000495835 GANABQ14697 944 aaKnown RBP22■■□□□ 1.11
HLA-C-209ENST00000495835 POMZP3Q6PJE2 187 aa22■■□□□ 1.11
HLA-C-209ENST00000495835 ADGRE4PQ86SQ3 457 aa22■■□□□ 1.11
HLA-C-209ENST00000495835 FADS6Q8N9I5 356 aa22■■□□□ 1.11
HLA-C-209ENST00000495835 CDRT4Q8N9R6 151 aa22■■□□□ 1.11
HLA-C-209ENST00000495835 NAXEQ8NCW5 288 aa22■■□□□ 1.11
HLA-C-209ENST00000495835 ZNF559Q9BR84 538 aa22■■□□□ 1.11
HLA-C-209ENST00000495835 PARD6BQ9BYG5 372 aa22■■□□□ 1.11
HLA-C-209ENST00000495835 PPP4R1LQ9P1A2 415 aa22■■□□□ 1.11
HLA-C-209ENST00000495835 BAIAP2L1Q9UHR4 511 aa22■■□□□ 1.11
HLA-C-209ENST00000495835 ATP6V1HQ9UI12 483 aa22■■□□□ 1.11
HLA-C-209ENST00000495835 DKKL1Q9UK85 242 aa22■■□□□ 1.11
HLA-C-209ENST00000495835 TMEM233B4DJY2 109 aa21.99■■□□□ 1.11
HLA-C-209ENST00000495835 CTIFO43310 598 aaKnown RBP21.99■■□□□ 1.11
HLA-C-209ENST00000495835 AKAP10O43572 662 aa21.99■■□□□ 1.11
HLA-C-209ENST00000495835 ZIC3O60481 467 aa21.99■■□□□ 1.11
HLA-C-209ENST00000495835 LYPLA1O75608 230 aaPredicted RBP21.99■■□□□ 1.11
HLA-C-209ENST00000495835 NKX2-2O95096 273 aa21.99■■□□□ 1.11
HLA-C-209ENST00000495835 SNUPNO95149 360 aaKnown RBP21.99■■□□□ 1.11
HLA-C-209ENST00000495835 CTSSP25774 331 aa21.99■■□□□ 1.11
HLA-C-209ENST00000495835 OPRM1P35372 400 aa21.99■■□□□ 1.11
HLA-C-209ENST00000495835 EEF1A1P68104 462 aaKnown RBP21.99■■□□□ 1.11
HLA-C-209ENST00000495835 ATP6AP1LQ52LC2 224 aa21.99■■□□□ 1.11
HLA-C-209ENST00000495835 ZNF385BQ569K4 471 aa21.99■■□□□ 1.11
HLA-C-209ENST00000495835 EEF1A1P5Q5VTE0 462 aa21.99■■□□□ 1.11
HLA-C-209ENST00000495835 ARSKQ6UWY0 536 aa21.99■■□□□ 1.11
HLA-C-209ENST00000495835 ZCCHC23Q6ZST2 131 aa21.99■■□□□ 1.11
HLA-C-209ENST00000495835 OR4K17Q8NGC6 315 aa21.99■■□□□ 1.11
HLA-C-209ENST00000495835 CIDECQ96AQ7 238 aaPredicted RBP21.99■■□□□ 1.11
HLA-C-209ENST00000495835 DOCK7Q96N67 2140 aa21.99■■□□□ 1.11
HLA-C-209ENST00000495835 ZIM3Q96PE6 472 aa21.99■■□□□ 1.11
HLA-C-209ENST00000495835 TM9SF2Q99805 663 aa21.99■■□□□ 1.11
HLA-C-209ENST00000495835 PTGES2Q9H7Z7 377 aa21.99■■□□□ 1.11
HLA-C-209ENST00000495835 L3MBTL1Q9Y468 752 aa21.99■■□□□ 1.11
HLA-C-209ENST00000495835 EMC8O43402 210 aa21.98■■□□□ 1.11
HLA-C-209ENST00000495835 CREB1P16220 341 aa21.98■■□□□ 1.11
HLA-C-209ENST00000495835 BMP5P22003 454 aa21.98■■□□□ 1.11
HLA-C-209ENST00000495835 LCN1P31025 176 aa21.98■■□□□ 1.11
HLA-C-209ENST00000495835 GABRA3P34903 492 aa21.98■■□□□ 1.11
HLA-C-209ENST00000495835 HPCAL1P37235 193 aa21.98■■□□□ 1.11
HLA-C-209ENST00000495835 LHX2P50458 406 aa21.98■■□□□ 1.11
HLA-C-209ENST00000495835 ZNF136P52737 540 aa21.98■■□□□ 1.11
HLA-C-209ENST00000495835 DLX5P56178 289 aa21.98■■□□□ 1.11
HLA-C-209ENST00000495835 KRT71Q3SY84 523 aa21.98■■□□□ 1.11
HLA-C-209ENST00000495835 GLYR1Q49A26 553 aaPredicted RBP21.98■■□□□ 1.11
HLA-C-209ENST00000495835 ANKRD26P1Q6NSI1 321 aa21.98■■□□□ 1.11
HLA-C-209ENST00000495835 CROCCP2Q86T23 111 aa21.98■■□□□ 1.11
HLA-C-209ENST00000495835 NUDCD3Q8IVD9 361 aa21.98■■□□□ 1.11
HLA-C-209ENST00000495835 RELL2Q8NC24 303 aaPredicted RBP21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms