RNA–Protein interactions for RNA: ENST00000494973.1

APTX-231, Transcript of aprataxin, human

TSL 4

Gene APTX, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-231	ENST00000494973	CCDC124	Q96CT7	223 aa	Known RBP	12.52	□□□□□ -0.41
APTX-231	ENST00000494973	THOC3	Q96J01	351 aa	Known RBP	12.52	□□□□□ -0.41
APTX-231	ENST00000494973	NSMCE2	Q96MF7	247 aa		12.52	□□□□□ -0.41
APTX-231	ENST00000494973	SDF2	Q99470	211 aa		12.52	□□□□□ -0.41
APTX-231	ENST00000494973	TREX2	Q9BQ50	279 aa	Predicted RBP	12.52	□□□□□ -0.41
APTX-231	ENST00000494973	GORASP2	Q9H8Y8	452 aa		12.52	□□□□□ -0.41
APTX-231	ENST00000494973	ADPRHL2	Q9NX46	363 aa		12.52	□□□□□ -0.41
APTX-231	ENST00000494973	RPS6KA6	Q9UK32	745 aa		12.52	□□□□□ -0.41
APTX-231	ENST00000494973	SAMD4A	Q9UPU9	718 aa	Known RBP	12.52	□□□□□ -0.41
APTX-231	ENST00000494973	DTX4	Q9Y2E6	619 aa		12.52	□□□□□ -0.41
APTX-231	ENST00000494973	IFT52	Q9Y366	437 aa		12.52	□□□□□ -0.41
APTX-231	ENST00000494973	PCDHGA10	Q9Y5H3	936 aa		12.52	□□□□□ -0.41
APTX-231	ENST00000494973	CEP295	Q9C0D2	2601 aa		12.52	□□□□□ -0.41
APTX-231	ENST00000494973	APC2	O95996	2303 aa		12.51	□□□□□ -0.41
APTX-231	ENST00000494973	ARGFX	A6NJG6	315 aa		12.51	□□□□□ -0.41
APTX-231	ENST00000494973	TP53I11	O14683	189 aa		12.51	□□□□□ -0.41
APTX-231	ENST00000494973	KIAA0513	O60268	411 aa		12.51	□□□□□ -0.41
APTX-231	ENST00000494973	PGM3	O95394	542 aa		12.51	□□□□□ -0.41
APTX-231	ENST00000494973	H6PD	O95479	791 aa		12.51	□□□□□ -0.41
APTX-231	ENST00000494973	ALPP	P05187	535 aa		12.51	□□□□□ -0.41
APTX-231	ENST00000494973	NGFR	P08138	427 aa		12.51	□□□□□ -0.41
APTX-231	ENST00000494973	NUDT7	P0C024	238 aa		12.51	□□□□□ -0.41
APTX-231	ENST00000494973	ITGAM	P11215	1152 aa		12.51	□□□□□ -0.41
APTX-231	ENST00000494973	HPGD	P15428	266 aa		12.51	□□□□□ -0.41
APTX-231	ENST00000494973	TCN1	P20061	433 aa	Predicted RBP	12.51	□□□□□ -0.41
APTX-231	ENST00000494973	ABCD3	P28288	659 aa		12.51	□□□□□ -0.41
APTX-231	ENST00000494973	CLK3	P49761	638 aa	Known RBP	12.51	□□□□□ -0.41
APTX-231	ENST00000494973	CASP9	P55211	416 aa		12.51	□□□□□ -0.41
APTX-231	ENST00000494973	MLF1	P58340	268 aa		12.51	□□□□□ -0.41
APTX-231	ENST00000494973	FLOT2	Q14254	428 aa		12.51	□□□□□ -0.41
APTX-231	ENST00000494973	NNAT	Q16517	81 aa		12.51	□□□□□ -0.41
APTX-231	ENST00000494973	ABHD17B	Q5VST6	288 aa		12.51	□□□□□ -0.41
APTX-231	ENST00000494973	AGAP7P	Q5VUJ5	663 aa		12.51	□□□□□ -0.41
APTX-231	ENST00000494973	AP1AR	Q63HQ0	302 aa		12.51	□□□□□ -0.41
APTX-231	ENST00000494973	GLYAT	Q6IB77	296 aa		12.51	□□□□□ -0.41
APTX-231	ENST00000494973	LCN8	Q6JVE9	175 aa		12.51	□□□□□ -0.41
APTX-231	ENST00000494973	TCTN3	Q6NUS6	607 aa		12.51	□□□□□ -0.41
APTX-231	ENST00000494973	ZNF619	Q8N2I2	560 aa		12.51	□□□□□ -0.41
APTX-231	ENST00000494973	GALNT16	Q8N428	558 aa		12.51	□□□□□ -0.41
APTX-231	ENST00000494973	RNF148	Q8N7C7	305 aa		12.51	□□□□□ -0.41
APTX-231	ENST00000494973	BCORP1	Q8N888	145 aa		12.51	□□□□□ -0.41
APTX-231	ENST00000494973	GOLM1	Q8NBJ4	401 aa		12.51	□□□□□ -0.41
APTX-231	ENST00000494973	SLC26A7	Q8TE54	656 aa		12.51	□□□□□ -0.41
APTX-231	ENST00000494973	ASB15	Q8WXK1	588 aa		12.51	□□□□□ -0.41
APTX-231	ENST00000494973	ZCCHC14	Q8WYQ9	949 aa	Known RBP	12.51	□□□□□ -0.41
APTX-231	ENST00000494973	LZIC	Q8WZA0	190 aa		12.51	□□□□□ -0.41
APTX-231	ENST00000494973	FIG4	Q92562	907 aa		12.51	□□□□□ -0.41
APTX-231	ENST00000494973	PIK3R3	Q92569	461 aa		12.51	□□□□□ -0.41
APTX-231	ENST00000494973	TTC9	Q92623	222 aa		12.51	□□□□□ -0.41
APTX-231	ENST00000494973	TMCO6	Q96DC7	493 aa		12.51	□□□□□ -0.41
APTX-231	ENST00000494973	OMA1	Q96E52	524 aa		12.51	□□□□□ -0.41
APTX-231	ENST00000494973	COL21A1	Q96P44	957 aa		12.51	□□□□□ -0.41
APTX-231	ENST00000494973	AGAP4	Q96P64	663 aa		12.51	□□□□□ -0.41
APTX-231	ENST00000494973	SECISBP2	Q96T21	854 aa	Known RBP	12.51	□□□□□ -0.41
APTX-231	ENST00000494973	MESP1	Q9BRJ9	268 aa		12.51	□□□□□ -0.41
APTX-231	ENST00000494973	SAP130	Q9H0E3	1048 aa		12.51	□□□□□ -0.41
APTX-231	ENST00000494973	ING2	Q9H160	280 aa		12.51	□□□□□ -0.41
APTX-231	ENST00000494973	PIF1	Q9H611	641 aa		12.51	□□□□□ -0.41
APTX-231	ENST00000494973	MTHFD2L	Q9H903	347 aa	Predicted RBP	12.51	□□□□□ -0.41
APTX-231	ENST00000494973	SLC7A8	Q9UHI5	535 aa		12.51	□□□□□ -0.41
APTX-231	ENST00000494973	NPFFR2	Q9Y5X5	522 aa		12.51	□□□□□ -0.41
APTX-231	ENST00000494973	DSPP	Q9NZW4	1301 aa		12.51	□□□□□ -0.41
APTX-231	ENST00000494973		A0A087WV48	116 aa		12.5	□□□□□ -0.41
APTX-231	ENST00000494973	AQP12B	A6NM10	295 aa		12.5	□□□□□ -0.41
APTX-231	ENST00000494973		A8MUI8	341 aa		12.5	□□□□□ -0.41
APTX-231	ENST00000494973		H3BNH8	94 aa		12.5	□□□□□ -0.41
APTX-231	ENST00000494973	ARPC2	O15144	300 aa		12.5	□□□□□ -0.41
APTX-231	ENST00000494973	ITGA10	O75578	1167 aa		12.5	□□□□□ -0.41
APTX-231	ENST00000494973	REM1	O75628	298 aa		12.5	□□□□□ -0.41
APTX-231	ENST00000494973	PPM1B	O75688	479 aa		12.5	□□□□□ -0.41
APTX-231	ENST00000494973	DBI	P07108	87 aa	Known RBP	12.5	□□□□□ -0.41
APTX-231	ENST00000494973	THBS1	P07996	1170 aa		12.5	□□□□□ -0.41
APTX-231	ENST00000494973	FBXO45	P0C2W1	286 aa		12.5	□□□□□ -0.41
APTX-231	ENST00000494973	PCBP3	P57721	371 aa	Known RBP	12.5	□□□□□ -0.41
APTX-231	ENST00000494973	KCNJ2	P63252	427 aa		12.5	□□□□□ -0.41
APTX-231	ENST00000494973	TLE3	Q04726	772 aa		12.5	□□□□□ -0.41
APTX-231	ENST00000494973	LARS2	Q15031	903 aa	Known RBP	12.5	□□□□□ -0.41
APTX-231	ENST00000494973	SYPL1	Q16563	259 aa		12.5	□□□□□ -0.41
APTX-231	ENST00000494973	FLYWCH1	Q4VC44	716 aa		12.5	□□□□□ -0.41
APTX-231	ENST00000494973	LIN52	Q52LA3	116 aa		12.5	□□□□□ -0.41
APTX-231	ENST00000494973	EIPR1	Q53HC9	387 aa		12.5	□□□□□ -0.41
APTX-231	ENST00000494973	NUP54	Q7Z3B4	507 aa		12.5	□□□□□ -0.41
APTX-231	ENST00000494973	WDR53	Q7Z5U6	358 aa	Predicted RBP	12.5	□□□□□ -0.41
APTX-231	ENST00000494973	AQP12A	Q8IXF9	295 aa		12.5	□□□□□ -0.41
APTX-231	ENST00000494973	CMIP	Q8IY22	773 aa		12.5	□□□□□ -0.41
APTX-231	ENST00000494973	C10orf111	Q8N326	155 aa		12.5	□□□□□ -0.41
APTX-231	ENST00000494973	TMEM156	Q8N614	296 aa		12.5	□□□□□ -0.41
APTX-231	ENST00000494973	ANKFN1	Q8N957	763 aa		12.5	□□□□□ -0.41
APTX-231	ENST00000494973	BRIX1	Q8TDN6	353 aa	Known RBP	12.5	□□□□□ -0.41
APTX-231	ENST00000494973	MAL2	Q969L2	176 aa		12.5	□□□□□ -0.41
APTX-231	ENST00000494973	TMBIM1	Q969X1	311 aa		12.5	□□□□□ -0.41
APTX-231	ENST00000494973	SPACA9	Q96E40	222 aa	Predicted RBP	12.5	□□□□□ -0.41
APTX-231	ENST00000494973	DTNBP1	Q96EV8	351 aa		12.5	□□□□□ -0.41
APTX-231	ENST00000494973	OTUB1	Q96FW1	271 aa	Predicted RBP	12.5	□□□□□ -0.41
APTX-231	ENST00000494973	CLPTM1L	Q96KA5	538 aa		12.5	□□□□□ -0.41
APTX-231	ENST00000494973	SGCZ	Q96LD1	299 aa		12.5	□□□□□ -0.41
APTX-231	ENST00000494973	DCBLD2	Q96PD2	775 aa		12.5	□□□□□ -0.41
APTX-231	ENST00000494973	RASL10B	Q96S79	203 aa		12.5	□□□□□ -0.41
APTX-231	ENST00000494973	UBQLN4	Q9NRR5	601 aa		12.5	□□□□□ -0.41
APTX-231	ENST00000494973	SEC14L3	Q9UDX4	400 aa		12.5	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 24 ms