RNA–Protein interactions for RNA: ENST00000494582.1

LINC00488-201, long intergenic non-protein coding RNA 488, humanhuman

TSL 1 (best) BASIC

Gene LINC00488, Length 2,520 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00488-201ENST00000494582 SMARCD3Q6STE5 483 aa9.52□□□□□ -0.88
LINC00488-201ENST00000494582 LRRC70Q7Z2Q7 622 aa9.52□□□□□ -0.88
LINC00488-201ENST00000494582 PDZD9Q8IXQ8 264 aa9.52□□□□□ -0.88
LINC00488-201ENST00000494582 HORMAD2Q8N7B1 307 aa9.52□□□□□ -0.88
LINC00488-201ENST00000494582 OR5M9Q8NGP3 310 aa9.52□□□□□ -0.88
LINC00488-201ENST00000494582 ASB8Q9H765 288 aa9.52□□□□□ -0.88
LINC00488-201ENST00000494582 ELAC1Q9H777 363 aaKnown RBP9.52□□□□□ -0.88
LINC00488-201ENST00000494582 WDR26Q9H7D7 661 aa9.52□□□□□ -0.88
LINC00488-201ENST00000494582 TEX10Q9NXF1 929 aaPredicted RBP9.52□□□□□ -0.88
LINC00488-201ENST00000494582 RUVBL1Q9Y265 456 aaKnown RBP9.52□□□□□ -0.88
LINC00488-201ENST00000494582 EXOSC1Q9Y3B2 195 aaKnown RBP9.52□□□□□ -0.88
LINC00488-201ENST00000494582 RAB3BP20337 219 aa9.52□□□□□ -0.89
LINC00488-201ENST00000494582 DGKGP49619 791 aa9.52□□□□□ -0.89
LINC00488-201ENST00000494582 ZNF280AP59817 542 aaPredicted RBP9.52□□□□□ -0.89
LINC00488-201ENST00000494582 SNTB2Q13425 540 aaKnown RBP9.52□□□□□ -0.89
LINC00488-201ENST00000494582 B3GNTL1Q67FW5 361 aaPredicted RBP9.52□□□□□ -0.89
LINC00488-201ENST00000494582 SFXN4Q6P4A7 337 aa9.52□□□□□ -0.89
LINC00488-201ENST00000494582 LINGO4Q6UY18 593 aa9.52□□□□□ -0.89
LINC00488-201ENST00000494582 RBMS3Q6XE24 437 aaKnown RBP9.52□□□□□ -0.89
LINC00488-201ENST00000494582 UBE2R2Q712K3 238 aaPredicted RBP9.52□□□□□ -0.89
LINC00488-201ENST00000494582 PRICKLE2Q7Z3G6 844 aa9.52□□□□□ -0.89
LINC00488-201ENST00000494582 CAMKMTQ7Z624 323 aa9.52□□□□□ -0.89
LINC00488-201ENST00000494582 MMP21Q8N119 569 aa9.52□□□□□ -0.89
LINC00488-201ENST00000494582 ZFP82Q8N141 532 aa9.52□□□□□ -0.89
LINC00488-201ENST00000494582 BBS1Q8NFJ9 593 aa9.52□□□□□ -0.89
LINC00488-201ENST00000494582 HAVCR2Q8TDQ0 301 aa9.52□□□□□ -0.89
LINC00488-201ENST00000494582 SMAD5Q99717 465 aaKnown RBP9.52□□□□□ -0.89
LINC00488-201ENST00000494582 RBPJLQ9UBG7 517 aa9.52□□□□□ -0.89
LINC00488-201ENST00000494582 ZNF106Q9H2Y7 1883 aaKnown RBP9.52□□□□□ -0.89
LINC00488-201ENST00000494582 A0A0C4DFX4 3053 aa9.52□□□□□ -0.89
LINC00488-201ENST00000494582 MID1O15344 667 aa9.51□□□□□ -0.89
LINC00488-201ENST00000494582 YKT6O15498 198 aa9.51□□□□□ -0.89
LINC00488-201ENST00000494582 SEPT4O43236 478 aa9.51□□□□□ -0.89
LINC00488-201ENST00000494582 NME6O75414 186 aaPredicted RBP9.51□□□□□ -0.89
LINC00488-201ENST00000494582 RP2O75695 350 aa9.51□□□□□ -0.89
LINC00488-201ENST00000494582 CCR7P32248 378 aa9.51□□□□□ -0.89
LINC00488-201ENST00000494582 CTSOP43234 321 aaPredicted RBP9.51□□□□□ -0.89
LINC00488-201ENST00000494582 MTNR1BP49286 362 aa9.51□□□□□ -0.89
LINC00488-201ENST00000494582 PFN3P60673 137 aa9.51□□□□□ -0.89
LINC00488-201ENST00000494582 SEC61A1P61619 476 aaKnown RBP9.51□□□□□ -0.89
LINC00488-201ENST00000494582 NFATC2Q13469 925 aa9.51□□□□□ -0.89
LINC00488-201ENST00000494582 GK2Q14410 553 aaPredicted RBP9.51□□□□□ -0.89
LINC00488-201ENST00000494582 UPP1Q16831 310 aa9.51□□□□□ -0.89
LINC00488-201ENST00000494582 ZNF630Q2M218 657 aaPredicted RBP9.51□□□□□ -0.89
LINC00488-201ENST00000494582 MINDY4Q4G0A6 757 aa9.51□□□□□ -0.89
LINC00488-201ENST00000494582 ARMC12Q5T9G4 340 aa9.51□□□□□ -0.89
LINC00488-201ENST00000494582 ANXA8L1Q5VT79 327 aa9.51□□□□□ -0.89
LINC00488-201ENST00000494582 SPRYD7Q5W111 196 aa9.51□□□□□ -0.89
LINC00488-201ENST00000494582 KIAA1161Q6NSJ0 714 aa9.51□□□□□ -0.89
LINC00488-201ENST00000494582 NCEH1Q6PIU2 408 aa9.51□□□□□ -0.89
LINC00488-201ENST00000494582 OLIG3Q7RTU3 272 aa9.51□□□□□ -0.89
LINC00488-201ENST00000494582 HMGN2P46Q86SG4 172 aa9.51□□□□□ -0.89
LINC00488-201ENST00000494582 SYT9Q86SS6 491 aa9.51□□□□□ -0.89
LINC00488-201ENST00000494582 LDLRAD3Q86YD5 345 aa9.51□□□□□ -0.89
LINC00488-201ENST00000494582 BOLLQ8N9W6 283 aaKnown RBP9.51□□□□□ -0.89
LINC00488-201ENST00000494582 VPS37AQ8NEZ2 397 aa9.51□□□□□ -0.89
LINC00488-201ENST00000494582 GOT1L1Q8NHS2 421 aaPredicted RBP9.51□□□□□ -0.89
LINC00488-201ENST00000494582 TIMP4Q99727 224 aa9.51□□□□□ -0.89
LINC00488-201ENST00000494582 ARL6Q9H0F7 186 aa9.51□□□□□ -0.89
LINC00488-201ENST00000494582 DNTTIP1Q9H147 329 aa9.51□□□□□ -0.89
LINC00488-201ENST00000494582 BARX1Q9HBU1 254 aaPredicted RBP9.51□□□□□ -0.89
LINC00488-201ENST00000494582 IL26Q9NPH9 171 aa9.51□□□□□ -0.89
LINC00488-201ENST00000494582 CTPS2Q9NRF8 586 aa9.51□□□□□ -0.89
LINC00488-201ENST00000494582 PTGFRNQ9P2B2 879 aa9.51□□□□□ -0.89
LINC00488-201ENST00000494582 PCDHB9Q9Y5E1 797 aa9.51□□□□□ -0.89
LINC00488-201ENST00000494582 SERTM1A2A2V5 107 aa9.51□□□□□ -0.89
LINC00488-201ENST00000494582 E7EQ34 232 aa9.51□□□□□ -0.89
LINC00488-201ENST00000494582 ARPC1BO15143 372 aaKnown RBP9.51□□□□□ -0.89
LINC00488-201ENST00000494582 RNF13O43567 381 aa9.51□□□□□ -0.89
LINC00488-201ENST00000494582 SPDEFO95238 335 aa9.51□□□□□ -0.89
LINC00488-201ENST00000494582 OLFM2O95897 454 aa9.51□□□□□ -0.89
LINC00488-201ENST00000494582 CH25HO95992 272 aa9.51□□□□□ -0.89
LINC00488-201ENST00000494582 SMIM10L2AP0DMW4 78 aa9.51□□□□□ -0.89
LINC00488-201ENST00000494582 SMIM10L2BP0DMW5 78 aa9.51□□□□□ -0.89
LINC00488-201ENST00000494582 SPP1P10451 314 aa9.51□□□□□ -0.89
LINC00488-201ENST00000494582 TYMPP19971 482 aa9.51□□□□□ -0.89
LINC00488-201ENST00000494582 ITGB8P26012 769 aa9.51□□□□□ -0.89
LINC00488-201ENST00000494582 MAPK9P45984 424 aa9.51□□□□□ -0.89
LINC00488-201ENST00000494582 SEMG2Q02383 582 aa9.51□□□□□ -0.89
LINC00488-201ENST00000494582 TLE2Q04725 743 aa9.51□□□□□ -0.89
LINC00488-201ENST00000494582 RING1Q06587 406 aa9.51□□□□□ -0.89
LINC00488-201ENST00000494582 UBXN2BQ14CS0 331 aa9.51□□□□□ -0.89
LINC00488-201ENST00000494582 RBMS2Q15434 407 aaKnown RBP9.51□□□□□ -0.89
LINC00488-201ENST00000494582 IER5LQ5T953 404 aa9.51□□□□□ -0.89
LINC00488-201ENST00000494582 LRRTM4Q86VH4 590 aa9.51□□□□□ -0.89
LINC00488-201ENST00000494582 IQCHQ86VS3 1027 aa9.51□□□□□ -0.89
LINC00488-201ENST00000494582 MICALL2Q8IY33 904 aa9.51□□□□□ -0.89
LINC00488-201ENST00000494582 SFT2D1Q8WV19 159 aa9.51□□□□□ -0.89
LINC00488-201ENST00000494582 ZFPM2Q8WW38 1151 aa9.51□□□□□ -0.89
LINC00488-201ENST00000494582 GSDMCQ9BYG8 508 aa9.51□□□□□ -0.89
LINC00488-201ENST00000494582 ENKD1Q9H0I2 346 aa9.51□□□□□ -0.89
LINC00488-201ENST00000494582 MAN2C1Q9NTJ4 1040 aa9.51□□□□□ -0.89
LINC00488-201ENST00000494582 ASB6Q9NWX5 421 aa9.51□□□□□ -0.89
LINC00488-201ENST00000494582 A4GNTQ9UNA3 340 aa9.51□□□□□ -0.89
LINC00488-201ENST00000494582 GNG14A0A1W2PPG7 69 aa9.5□□□□□ -0.89
LINC00488-201ENST00000494582 MGAT4DA6NG13 374 aa9.5□□□□□ -0.89
LINC00488-201ENST00000494582 GLTPD2A6NH11 291 aa9.5□□□□□ -0.89
LINC00488-201ENST00000494582 SGCEO43556 437 aa9.5□□□□□ -0.89
LINC00488-201ENST00000494582 SLC28A2O43868 658 aa9.5□□□□□ -0.89
LINC00488-201ENST00000494582 SSX5O60225 188 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms