RNA–Protein interactions for RNA: ENST00000494465.5

ATG4B-225, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 2,365 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-225ENST00000494465 GTF2IRD2Q86UP8 949 aa15.38■□□□□ 0.05
ATG4B-225ENST00000494465 OR1L3Q8NH93 324 aa15.38■□□□□ 0.05
ATG4B-225ENST00000494465 CCDC74AQ96AQ1 378 aa15.38■□□□□ 0.05
ATG4B-225ENST00000494465 NODALQ96S42 347 aa15.38■□□□□ 0.05
ATG4B-225ENST00000494465 TUBA1CQ9BQE3 449 aa15.38■□□□□ 0.05
ATG4B-225ENST00000494465 UCK2Q9BZX2 261 aa15.38■□□□□ 0.05
ATG4B-225ENST00000494465 ENOPH1Q9UHY7 261 aa15.38■□□□□ 0.05
ATG4B-225ENST00000494465 MAU2Q9Y6X3 613 aa15.38■□□□□ 0.05
ATG4B-225ENST00000494465 COMMD3-BMI1R4GMX3 469 aa15.38■□□□□ 0.05
ATG4B-225ENST00000494465 FER1L5A0AVI2 2057 aa15.37■□□□□ 0.05
ATG4B-225ENST00000494465 LY6G6EA0A0G2JKS1 128 aa15.37■□□□□ 0.05
ATG4B-225ENST00000494465 ZNF749O43361 778 aa15.37■□□□□ 0.05
ATG4B-225ENST00000494465 COQ9O75208 318 aa15.37■□□□□ 0.05
ATG4B-225ENST00000494465 TP53P04637 393 aaPredicted RBP15.37■□□□□ 0.05
ATG4B-225ENST00000494465 FOLR1P15328 257 aa15.37■□□□□ 0.05
ATG4B-225ENST00000494465 SSTR4P31391 388 aa15.37■□□□□ 0.05
ATG4B-225ENST00000494465 SLC5A2P31639 672 aa15.37■□□□□ 0.05
ATG4B-225ENST00000494465 STT3AP46977 705 aa15.37■□□□□ 0.05
ATG4B-225ENST00000494465 HSD17B7P56937 341 aa15.37■□□□□ 0.05
ATG4B-225ENST00000494465 HOXC5Q00444 222 aa15.37■□□□□ 0.05
ATG4B-225ENST00000494465 PRAMEF17Q5VTA0 474 aa15.37■□□□□ 0.05
ATG4B-225ENST00000494465 TMEM236Q5W0B7 351 aa15.37■□□□□ 0.05
ATG4B-225ENST00000494465 FIGNL1Q6PIW4 674 aa15.37■□□□□ 0.05
ATG4B-225ENST00000494465 ZER1Q7Z7L7 766 aa15.37■□□□□ 0.05
ATG4B-225ENST00000494465 OR13F1Q8NGS4 319 aa15.37■□□□□ 0.05
ATG4B-225ENST00000494465 RBM18Q96H35 190 aaKnown RBP15.37■□□□□ 0.05
ATG4B-225ENST00000494465 NUDT22Q9BRQ3 303 aa15.37■□□□□ 0.05
ATG4B-225ENST00000494465 LMF2Q9BU23 707 aaKnown RBP15.37■□□□□ 0.05
ATG4B-225ENST00000494465 LANCL2Q9NS86 450 aa15.37■□□□□ 0.05
ATG4B-225ENST00000494465 SEMA4GQ9NTN9 838 aa15.37■□□□□ 0.05
ATG4B-225ENST00000494465 ERVK-18Q9QC07 812 aa15.37■□□□□ 0.05
ATG4B-225ENST00000494465 SLC13A4Q9UKG4 626 aa15.37■□□□□ 0.05
ATG4B-225ENST00000494465 NTNG1Q9Y2I2 539 aa15.37■□□□□ 0.05
ATG4B-225ENST00000494465 U3KQA8 63 aa15.37■□□□□ 0.05
ATG4B-225ENST00000494465 PEX12O00623 359 aa15.36■□□□□ 0.05
ATG4B-225ENST00000494465 BRINP1O60477 761 aa15.36■□□□□ 0.05
ATG4B-225ENST00000494465 IGFBP1P08833 259 aaPredicted RBP15.36■□□□□ 0.05
ATG4B-225ENST00000494465 OSMP13725 252 aa15.36■□□□□ 0.05
ATG4B-225ENST00000494465 IDH2P48735 452 aaKnown RBP15.36■□□□□ 0.05
ATG4B-225ENST00000494465 ZNF155Q12901 538 aaPredicted RBP15.36■□□□□ 0.05
ATG4B-225ENST00000494465 ILKQ13418 452 aa15.36■□□□□ 0.05
ATG4B-225ENST00000494465 TTLL10Q6ZVT0 673 aa15.36■□□□□ 0.05
ATG4B-225ENST00000494465 ZAR1Q86SH2 424 aa15.36■□□□□ 0.05
ATG4B-225ENST00000494465 OR4K5Q8NGD3 323 aa15.36■□□□□ 0.05
ATG4B-225ENST00000494465 SAP25Q8TEE9 199 aa15.36■□□□□ 0.05
ATG4B-225ENST00000494465 SIGLEC11Q96RL6 698 aa15.36■□□□□ 0.05
ATG4B-225ENST00000494465 TRIM45Q9H8W5 580 aaPredicted RBP15.36■□□□□ 0.05
ATG4B-225ENST00000494465 FOLH1BQ9HBA9 442 aa15.36■□□□□ 0.05
ATG4B-225ENST00000494465 NECTIN3Q9NQS3 549 aa15.36■□□□□ 0.05
ATG4B-225ENST00000494465 KLHL28Q9NXS3 571 aa15.36■□□□□ 0.05
ATG4B-225ENST00000494465 CDC14AQ9UNH5 594 aa15.36■□□□□ 0.05
ATG4B-225ENST00000494465 DTX4Q9Y2E6 619 aa15.36■□□□□ 0.05
ATG4B-225ENST00000494465 TPRKBQ9Y3C4 175 aa15.36■□□□□ 0.05
ATG4B-225ENST00000494465 PCDHGB1Q9Y5G3 927 aa15.36■□□□□ 0.05
ATG4B-225ENST00000494465 NPIPA5A0A0B4J1W7 369 aa15.36■□□□□ 0.05
ATG4B-225ENST00000494465 CPSF4LA6NMK7 179 aaKnown RBP15.36■□□□□ 0.05
ATG4B-225ENST00000494465 A8MU76 341 aa15.36■□□□□ 0.05
ATG4B-225ENST00000494465 NPIPA7E9PJI5 369 aa15.36■□□□□ 0.05
ATG4B-225ENST00000494465 LAMTOR5O43504 91 aa15.36■□□□□ 0.05
ATG4B-225ENST00000494465 SEC14L2O76054 403 aa15.36■□□□□ 0.05
ATG4B-225ENST00000494465 AK1P00568 194 aa15.36■□□□□ 0.05
ATG4B-225ENST00000494465 THY1P04216 161 aa15.36■□□□□ 0.05
ATG4B-225ENST00000494465 MSL3P1P0C860 447 aa15.36■□□□□ 0.05
ATG4B-225ENST00000494465 NPIPA8P0DM63 369 aa15.36■□□□□ 0.05
ATG4B-225ENST00000494465 MMP11P24347 488 aa15.36■□□□□ 0.05
ATG4B-225ENST00000494465 UGT2B15P54855 530 aa15.36■□□□□ 0.05
ATG4B-225ENST00000494465 TAS2R41P59536 307 aa15.36■□□□□ 0.05
ATG4B-225ENST00000494465 POU6F2P78424 691 aaPredicted RBP15.36■□□□□ 0.05
ATG4B-225ENST00000494465 TARDBPQ13148 414 aaKnown RBP eCLIP15.36■□□□□ 0.052e-12■■■■□ 21.7
ATG4B-225ENST00000494465 LARS2Q15031 903 aaKnown RBP15.36■□□□□ 0.05
ATG4B-225ENST00000494465 TMPRSS9Q7Z410 1059 aa15.36■□□□□ 0.05
ATG4B-225ENST00000494465 CLVS1Q8IUQ0 354 aaPredicted RBP15.36■□□□□ 0.05
ATG4B-225ENST00000494465 ZDHHC19Q8WVZ1 309 aaPredicted RBP15.36■□□□□ 0.05
ATG4B-225ENST00000494465 VSTM2LQ96N03 204 aa15.36■□□□□ 0.05
ATG4B-225ENST00000494465 DGAT2Q96PD7 388 aa15.36■□□□□ 0.05
ATG4B-225ENST00000494465 GPA33Q99795 319 aa15.36■□□□□ 0.05
ATG4B-225ENST00000494465 LHPPQ9H008 270 aa15.36■□□□□ 0.05
ATG4B-225ENST00000494465 ZNF232Q9UNY5 417 aa15.36■□□□□ 0.05
ATG4B-225ENST00000494465 HEMK1Q9Y5R4 338 aaPredicted RBP15.36■□□□□ 0.05
ATG4B-225ENST00000494465 NUP210LQ5VU65 1888 aa15.35■□□□□ 0.05
ATG4B-225ENST00000494465 A0A087WUU8 490 aa15.35■□□□□ 0.05
ATG4B-225ENST00000494465 M0R129 80 aa15.35■□□□□ 0.05
ATG4B-225ENST00000494465 CYP7B1O75881 506 aa15.35■□□□□ 0.05
ATG4B-225ENST00000494465 KCNK2O95069 426 aa15.35■□□□□ 0.05
ATG4B-225ENST00000494465 PCSK6P29122 969 aa15.35■□□□□ 0.05
ATG4B-225ENST00000494465 TTKP33981 857 aa15.35■□□□□ 0.05
ATG4B-225ENST00000494465 OR1D4P47884 311 aa15.35■□□□□ 0.05
ATG4B-225ENST00000494465 ARL4DP49703 201 aa15.35■□□□□ 0.05
ATG4B-225ENST00000494465 ZNF136P52737 540 aa15.35■□□□□ 0.05
ATG4B-225ENST00000494465 RGS8P57771 180 aaPredicted RBP15.35■□□□□ 0.05
ATG4B-225ENST00000494465 CSTF1Q05048 431 aaKnown RBP15.35■□□□□ 0.05
ATG4B-225ENST00000494465 HLA-BQ31612 363 aa15.35■□□□□ 0.05
ATG4B-225ENST00000494465 ENTPD8Q5MY95 495 aa15.35■□□□□ 0.05
ATG4B-225ENST00000494465 C1orf94Q6P1W5 598 aa15.35■□□□□ 0.05
ATG4B-225ENST00000494465 ZC3H14Q6PJT7 736 aaKnown RBP15.35■□□□□ 0.05
ATG4B-225ENST00000494465 CD300LDQ6UXZ3 194 aa15.35■□□□□ 0.05
ATG4B-225ENST00000494465 B3GNT6Q6ZMB0 384 aa15.35■□□□□ 0.05
ATG4B-225ENST00000494465 MED25Q71SY5 747 aa15.35■□□□□ 0.05
ATG4B-225ENST00000494465 NR4A3Q92570 626 aa15.35■□□□□ 0.05
ATG4B-225ENST00000494465 ISOC1Q96CN7 298 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms