RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 TRMT12Q53H54 448 aaKnown RBP12.09□□□□□ -0.47
ERCC3-209ENST00000494464 REP15Q6BDI9 236 aa12.09□□□□□ -0.47
ERCC3-209ENST00000494464 TMEM211Q6ICI0 200 aa12.09□□□□□ -0.47
ERCC3-209ENST00000494464 FAM71E1Q6IPT2 247 aa12.09□□□□□ -0.47
ERCC3-209ENST00000494464 TMEM64Q6YI46 380 aa12.09□□□□□ -0.47
ERCC3-209ENST00000494464 C3P1Q6ZMU1 363 aa12.09□□□□□ -0.47
ERCC3-209ENST00000494464 NCCRP1Q6ZVX7 275 aaPredicted RBP12.09□□□□□ -0.47
ERCC3-209ENST00000494464 IKBIPQ70UQ0 350 aa12.09□□□□□ -0.47
ERCC3-209ENST00000494464 SIMC1Q8NDZ2 872 aa12.09□□□□□ -0.47
ERCC3-209ENST00000494464 OR5M3Q8NGP4 307 aa12.09□□□□□ -0.47
ERCC3-209ENST00000494464 OR9A2Q8NGT5 310 aa12.09□□□□□ -0.47
ERCC3-209ENST00000494464 NTNG2Q96CW9 530 aa12.09□□□□□ -0.47
ERCC3-209ENST00000494464 PPP3R2Q96LZ3 170 aa12.09□□□□□ -0.47
ERCC3-209ENST00000494464 BTBD9Q96Q07 612 aa12.09□□□□□ -0.47
ERCC3-209ENST00000494464 ANGPTL4Q9BY76 406 aa12.09□□□□□ -0.47
ERCC3-209ENST00000494464 ACKR4Q9NPB9 350 aa12.09□□□□□ -0.47
ERCC3-209ENST00000494464 ASIC5Q9NY37 505 aa12.09□□□□□ -0.47
ERCC3-209ENST00000494464 TAS2R7Q9NYW3 318 aa12.09□□□□□ -0.47
ERCC3-209ENST00000494464 CCDC167Q9P0B6 97 aa12.09□□□□□ -0.47
ERCC3-209ENST00000494464 HRH3Q9Y5N1 445 aa12.09□□□□□ -0.47
ERCC3-209ENST00000494464 CELSR2Q9HCU4 2923 aa12.09□□□□□ -0.47
ERCC3-209ENST00000494464 DNAJC13O75165 2243 aa12.09□□□□□ -0.47
ERCC3-209ENST00000494464 CACNA1CQ13936 2221 aa12.08□□□□□ -0.48
ERCC3-209ENST00000494464 FIGNL2A6NMB9 653 aa12.08□□□□□ -0.48
ERCC3-209ENST00000494464 MYO1GB0I1T2 1018 aa12.08□□□□□ -0.48
ERCC3-209ENST00000494464 NPIPA2E9PIF3 369 aa12.08□□□□□ -0.48
ERCC3-209ENST00000494464 NPIPA3F8WFD2 350 aa12.08□□□□□ -0.48
ERCC3-209ENST00000494464 LSM1O15116 133 aaKnown RBP12.08□□□□□ -0.48
ERCC3-209ENST00000494464 TO15178 435 aa12.08□□□□□ -0.48
ERCC3-209ENST00000494464 RGS14O43566 566 aa12.08□□□□□ -0.48
ERCC3-209ENST00000494464 PLOD3O60568 738 aa12.08□□□□□ -0.48
ERCC3-209ENST00000494464 LRATO95237 230 aa12.08□□□□□ -0.48
ERCC3-209ENST00000494464 RFPL3SP0C7P2 107 aa12.08□□□□□ -0.48
ERCC3-209ENST00000494464 CD1EP15812 388 aa12.08□□□□□ -0.48
ERCC3-209ENST00000494464 DRD5P21918 477 aa12.08□□□□□ -0.48
ERCC3-209ENST00000494464 HTR1EP28566 365 aa12.08□□□□□ -0.48
ERCC3-209ENST00000494464 GRNP28799 593 aaKnown RBP12.08□□□□□ -0.48
ERCC3-209ENST00000494464 MPIP34949 423 aa12.08□□□□□ -0.48
ERCC3-209ENST00000494464 MAN2A2P49641 1150 aa12.08□□□□□ -0.48
ERCC3-209ENST00000494464 PSPHP78330 225 aa12.08□□□□□ -0.48
ERCC3-209ENST00000494464 EMX2Q04743 252 aa12.08□□□□□ -0.48
ERCC3-209ENST00000494464 MAD2L1Q13257 205 aaPredicted RBP12.08□□□□□ -0.48
ERCC3-209ENST00000494464 KIAA0040Q15053 153 aa12.08□□□□□ -0.48
ERCC3-209ENST00000494464 NNATQ16517 81 aa12.08□□□□□ -0.48
ERCC3-209ENST00000494464 C6orf136Q5SQH8 315 aa12.08□□□□□ -0.48
ERCC3-209ENST00000494464 NOXRED1Q6NXP6 359 aa12.08□□□□□ -0.48
ERCC3-209ENST00000494464 Q6ZSR9 355 aa12.08□□□□□ -0.48
ERCC3-209ENST00000494464 FUNDC1Q8IVP5 155 aa12.08□□□□□ -0.48
ERCC3-209ENST00000494464 CCDC116Q8IYX3 515 aa12.08□□□□□ -0.48
ERCC3-209ENST00000494464 PRR22Q8IZ63 422 aa12.08□□□□□ -0.48
ERCC3-209ENST00000494464 FAM9CQ8IZT9 166 aa12.08□□□□□ -0.48
ERCC3-209ENST00000494464 MARVELD2Q8N4S9 558 aa12.08□□□□□ -0.48
ERCC3-209ENST00000494464 WDR60Q8WVS4 1066 aa12.08□□□□□ -0.48
ERCC3-209ENST00000494464 JADE3Q92613 823 aa12.08□□□□□ -0.48
ERCC3-209ENST00000494464 SARAFQ96BY9 339 aa12.08□□□□□ -0.48
ERCC3-209ENST00000494464 ROPN1LQ96C74 230 aa12.08□□□□□ -0.48
ERCC3-209ENST00000494464 ZNF764Q96H86 408 aaPredicted RBP12.08□□□□□ -0.48
ERCC3-209ENST00000494464 TMEM41AQ96HV5 264 aa12.08□□□□□ -0.48
ERCC3-209ENST00000494464 CLPTM1LQ96KA5 538 aa12.08□□□□□ -0.48
ERCC3-209ENST00000494464 FCRL1Q96LA6 429 aa12.08□□□□□ -0.48
ERCC3-209ENST00000494464 DCLRE1BQ9H816 532 aa12.08□□□□□ -0.48
ERCC3-209ENST00000494464 MIEF1Q9NQG6 463 aa12.08□□□□□ -0.48
ERCC3-209ENST00000494464 COQ3Q9NZJ6 369 aa12.08□□□□□ -0.48
ERCC3-209ENST00000494464 ZIM2Q9NZV7 527 aa12.08□□□□□ -0.48
ERCC3-209ENST00000494464 POLR3HQ9Y535 204 aaPredicted RBP12.08□□□□□ -0.48
ERCC3-209ENST00000494464 PCNX1Q96RV3 2341 aa12.08□□□□□ -0.48
ERCC3-209ENST00000494464 A0A087WV62 115 aa12.07□□□□□ -0.48
ERCC3-209ENST00000494464 TRGV5A0A0B4J1U4 118 aa12.07□□□□□ -0.48
ERCC3-209ENST00000494464 FBP2O00757 339 aa12.07□□□□□ -0.48
ERCC3-209ENST00000494464 ENTPD5O75356 428 aa12.07□□□□□ -0.48
ERCC3-209ENST00000494464 ABCB1P08183 1280 aaPredicted RBP12.07□□□□□ -0.48
ERCC3-209ENST00000494464 IFI6P09912 130 aa12.07□□□□□ -0.48
ERCC3-209ENST00000494464 ENDOUP21128 410 aaKnown RBP12.07□□□□□ -0.48
ERCC3-209ENST00000494464 CASP3P42574 277 aa12.07□□□□□ -0.48
ERCC3-209ENST00000494464 C2orf80Q0P641 193 aa12.07□□□□□ -0.48
ERCC3-209ENST00000494464 PLCXD2Q0VAA5 305 aa12.07□□□□□ -0.48
ERCC3-209ENST00000494464 RCAN2Q14206 197 aa12.07□□□□□ -0.48
ERCC3-209ENST00000494464 CDSNQ15517 529 aa12.07□□□□□ -0.48
ERCC3-209ENST00000494464 GXYLT1Q4G148 440 aa12.07□□□□□ -0.48
ERCC3-209ENST00000494464 FNDC7Q5VTL7 733 aa12.07□□□□□ -0.48
ERCC3-209ENST00000494464 C1orf146Q5VVC0 180 aa12.07□□□□□ -0.48
ERCC3-209ENST00000494464 BICRALQ6AI39 1079 aa12.07□□□□□ -0.48
ERCC3-209ENST00000494464 SP5Q6BEB4 398 aaPredicted RBP12.07□□□□□ -0.48
ERCC3-209ENST00000494464 C8orf82Q6P1X6 216 aaPredicted RBP12.07□□□□□ -0.48
ERCC3-209ENST00000494464 NUP54Q7Z3B4 507 aa12.07□□□□□ -0.48
ERCC3-209ENST00000494464 TICAM1Q8IUC6 712 aa12.07□□□□□ -0.48
ERCC3-209ENST00000494464 FNDC5Q8NAU1 212 aa12.07□□□□□ -0.48
ERCC3-209ENST00000494464 PCYOX1LQ8NBM8 494 aa12.07□□□□□ -0.48
ERCC3-209ENST00000494464 OR9I1Q8NGQ6 314 aa12.07□□□□□ -0.48
ERCC3-209ENST00000494464 CDC26Q8NHZ8 85 aa12.07□□□□□ -0.48
ERCC3-209ENST00000494464 HGDQ93099 445 aa12.07□□□□□ -0.48
ERCC3-209ENST00000494464 MARVELD3Q96A59 401 aa12.07□□□□□ -0.48
ERCC3-209ENST00000494464 OMA1Q96E52 524 aa12.07□□□□□ -0.48
ERCC3-209ENST00000494464 VSTM2LQ96N03 204 aa12.07□□□□□ -0.48
ERCC3-209ENST00000494464 BBS4Q96RK4 519 aa12.07□□□□□ -0.48
ERCC3-209ENST00000494464 UBQLN3Q9H347 655 aa12.07□□□□□ -0.48
ERCC3-209ENST00000494464 LDAHQ9H6V9 325 aa12.07□□□□□ -0.48
ERCC3-209ENST00000494464 LRTM1Q9HBL6 345 aa12.07□□□□□ -0.48
ERCC3-209ENST00000494464 PNPLA3Q9NST1 481 aa12.07□□□□□ -0.48
ERCC3-209ENST00000494464 C1orf109Q9NX04 203 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms