RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 NTNG1Q9Y2I2 539 aa9.92□□□□□ -0.82
CLCN6-208ENST00000494028 IFT52Q9Y366 437 aa9.92□□□□□ -0.82
CLCN6-208ENST00000494028 TMEM184BQ9Y519 407 aaPredicted RBP9.92□□□□□ -0.82
CLCN6-208ENST00000494028 CSNK1G3Q9Y6M4 447 aa9.92□□□□□ -0.82
CLCN6-208ENST00000494028 CACNA1EQ15878 2313 aa9.91□□□□□ -0.82
CLCN6-208ENST00000494028 GON4LQ3T8J9 2241 aa9.91□□□□□ -0.82
CLCN6-208ENST00000494028 SPTBP11277 2137 aa9.91□□□□□ -0.82
CLCN6-208ENST00000494028 A0A1W2PPW3 197 aa9.91□□□□□ -0.82
CLCN6-208ENST00000494028 HYKKA2RU49 373 aa9.91□□□□□ -0.82
CLCN6-208ENST00000494028 CLDN24A6NM45 220 aa9.91□□□□□ -0.82
CLCN6-208ENST00000494028 STK25O00506 426 aa9.91□□□□□ -0.82
CLCN6-208ENST00000494028 DUX1O43812 170 aa9.91□□□□□ -0.82
CLCN6-208ENST00000494028 HYAL3O43820 417 aaPredicted RBP9.91□□□□□ -0.82
CLCN6-208ENST00000494028 OR10H2O60403 315 aa9.91□□□□□ -0.82
CLCN6-208ENST00000494028 MAN1A2O60476 641 aa9.91□□□□□ -0.82
CLCN6-208ENST00000494028 GABARAPO95166 117 aa9.91□□□□□ -0.82
CLCN6-208ENST00000494028 OR5F1O95221 314 aa9.91□□□□□ -0.82
CLCN6-208ENST00000494028 NTN1O95631 604 aa9.91□□□□□ -0.82
CLCN6-208ENST00000494028 THY1P04216 161 aa9.91□□□□□ -0.82
CLCN6-208ENST00000494028 TDGF1P13385 188 aa9.91□□□□□ -0.82
CLCN6-208ENST00000494028 NID1P14543 1247 aa9.91□□□□□ -0.82
CLCN6-208ENST00000494028 S1PR1P21453 382 aa9.91□□□□□ -0.82
CLCN6-208ENST00000494028 ACVR2AP27037 513 aa9.91□□□□□ -0.82
CLCN6-208ENST00000494028 TRHRP34981 398 aaPredicted RBP9.91□□□□□ -0.82
CLCN6-208ENST00000494028 GCGRP47871 477 aa9.91□□□□□ -0.82
CLCN6-208ENST00000494028 TMBIM6P55061 237 aa9.91□□□□□ -0.82
CLCN6-208ENST00000494028 OR1D5P58170 312 aa9.91□□□□□ -0.82
CLCN6-208ENST00000494028 CDC42P60953 191 aa9.91□□□□□ -0.82
CLCN6-208ENST00000494028 POU6F2P78424 691 aaPredicted RBP9.91□□□□□ -0.82
CLCN6-208ENST00000494028 CFHR1Q03591 330 aa9.91□□□□□ -0.82
CLCN6-208ENST00000494028 EMX1Q04741 257 aaPredicted RBP9.91□□□□□ -0.82
CLCN6-208ENST00000494028 MAP4K2Q12851 820 aa9.91□□□□□ -0.82
CLCN6-208ENST00000494028 TRAM2Q15035 370 aa9.91□□□□□ -0.82
CLCN6-208ENST00000494028 MAPK14Q16539 360 aa9.91□□□□□ -0.82
CLCN6-208ENST00000494028 TCTE1Q5JU00 501 aa9.91□□□□□ -0.82
CLCN6-208ENST00000494028 LYSMD4Q5XG99 296 aa9.91□□□□□ -0.82
CLCN6-208ENST00000494028 TSSK4Q6SA08 328 aa9.91□□□□□ -0.82
CLCN6-208ENST00000494028 NPSR1Q6W5P4 371 aa9.91□□□□□ -0.82
CLCN6-208ENST00000494028 CCDC81Q6ZN84 652 aa9.91□□□□□ -0.82
CLCN6-208ENST00000494028 KANSL1Q7Z3B3 1105 aa9.91□□□□□ -0.82
CLCN6-208ENST00000494028 PRSS42Q7Z5A4 293 aa9.91□□□□□ -0.82
CLCN6-208ENST00000494028 ZAR1Q86SH2 424 aa9.91□□□□□ -0.82
CLCN6-208ENST00000494028 CARFQ8N187 725 aa9.91□□□□□ -0.82
CLCN6-208ENST00000494028 LINC00471Q8N535 108 aa9.91□□□□□ -0.82
CLCN6-208ENST00000494028 FKBP10Q96AY3 582 aa9.91□□□□□ -0.82
CLCN6-208ENST00000494028 ZDHHC12Q96GR4 267 aa9.91□□□□□ -0.82
CLCN6-208ENST00000494028 GPA33Q99795 319 aa9.91□□□□□ -0.82
CLCN6-208ENST00000494028 COPS4Q9BT78 406 aa9.91□□□□□ -0.82
CLCN6-208ENST00000494028 PRR14Q9BWN1 585 aa9.91□□□□□ -0.82
CLCN6-208ENST00000494028 ERVMER34-1Q9H9K5 563 aa9.91□□□□□ -0.82
CLCN6-208ENST00000494028 CACYBPQ9HB71 228 aaKnown RBP9.91□□□□□ -0.82
CLCN6-208ENST00000494028 SLC25A19Q9HC21 320 aa9.91□□□□□ -0.82
CLCN6-208ENST00000494028 ACOT13Q9NPJ3 140 aa9.91□□□□□ -0.82
CLCN6-208ENST00000494028 POLE3Q9NRF9 147 aa9.91□□□□□ -0.82
CLCN6-208ENST00000494028 FBXO34Q9NWN3 711 aa9.91□□□□□ -0.82
CLCN6-208ENST00000494028 KLHL28Q9NXS3 571 aa9.91□□□□□ -0.82
CLCN6-208ENST00000494028 LRIT1Q9P2V4 623 aa9.91□□□□□ -0.82
CLCN6-208ENST00000494028 KLHL3Q9UH77 587 aa9.91□□□□□ -0.82
CLCN6-208ENST00000494028 MUTYHQ9UIF7 546 aa9.91□□□□□ -0.82
CLCN6-208ENST00000494028 KCNE5Q9UJ90 142 aa9.91□□□□□ -0.82
CLCN6-208ENST00000494028 MRPS33Q9Y291 106 aaKnown RBP9.91□□□□□ -0.82
CLCN6-208ENST00000494028 SIT1Q9Y3P8 196 aa9.91□□□□□ -0.82
CLCN6-208ENST00000494028 KNL1Q8NG31 2342 aa9.91□□□□□ -0.82
CLCN6-208ENST00000494028 TTC28Q96AY4 2481 aa9.91□□□□□ -0.82
CLCN6-208ENST00000494028 ADAMTS9Q9P2N4 1935 aa9.9□□□□□ -0.82
CLCN6-208ENST00000494028 A0A087WUU8 490 aa9.9□□□□□ -0.82
CLCN6-208ENST00000494028 H0YIG0 161 aa9.9□□□□□ -0.82
CLCN6-208ENST00000494028 PEX12O00623 359 aa9.9□□□□□ -0.82
CLCN6-208ENST00000494028 AP3D1O14617 1153 aa9.9□□□□□ -0.82
CLCN6-208ENST00000494028 NUDT21O43809 227 aaKnown RBP9.9□□□□□ -0.82
CLCN6-208ENST00000494028 PIP5K1CO60331 668 aa9.9□□□□□ -0.82
CLCN6-208ENST00000494028 BRINP1O60477 761 aa9.9□□□□□ -0.82
CLCN6-208ENST00000494028 BCAS1O75363 584 aaPredicted RBP9.9□□□□□ -0.82
CLCN6-208ENST00000494028 STX11O75558 287 aa9.9□□□□□ -0.82
CLCN6-208ENST00000494028 CDC123O75794 336 aaPredicted RBP9.9□□□□□ -0.82
CLCN6-208ENST00000494028 LCKP06239 509 aa9.9□□□□□ -0.82
CLCN6-208ENST00000494028 CDK1P06493 297 aa9.9□□□□□ -0.82
CLCN6-208ENST00000494028 DBIP07108 87 aaKnown RBP9.9□□□□□ -0.82
CLCN6-208ENST00000494028 HTR2AP28223 471 aa9.9□□□□□ -0.82
CLCN6-208ENST00000494028 EPHA8P29322 1005 aaPredicted RBP9.9□□□□□ -0.82
CLCN6-208ENST00000494028 HOXA6P31267 233 aa9.9□□□□□ -0.82
CLCN6-208ENST00000494028 SSTR4P31391 388 aa9.9□□□□□ -0.82
CLCN6-208ENST00000494028 TGFBR2P37173 567 aa9.9□□□□□ -0.82
CLCN6-208ENST00000494028 STT3AP46977 705 aa9.9□□□□□ -0.82
CLCN6-208ENST00000494028 PPM1FP49593 454 aaPredicted RBP9.9□□□□□ -0.82
CLCN6-208ENST00000494028 EMP3P54852 163 aa9.9□□□□□ -0.82
CLCN6-208ENST00000494028 CSNK2BP67870 215 aa9.9□□□□□ -0.82
CLCN6-208ENST00000494028 HOXC5Q00444 222 aa9.9□□□□□ -0.82
CLCN6-208ENST00000494028 BNIP3Q12983 259 aa9.9□□□□□ -0.82
CLCN6-208ENST00000494028 TARDBPQ13148 414 aaKnown RBP eCLIP9.9□□□□□ -0.829e-8■■■■■ 29.1
CLCN6-208ENST00000494028 SLC13A2Q13183 592 aa9.9□□□□□ -0.82
CLCN6-208ENST00000494028 ILKQ13418 452 aa9.9□□□□□ -0.82
CLCN6-208ENST00000494028 AQP6Q13520 282 aa9.9□□□□□ -0.82
CLCN6-208ENST00000494028 KCNAB1Q14722 419 aa9.9□□□□□ -0.82
CLCN6-208ENST00000494028 GRM7Q14831 915 aa9.9□□□□□ -0.82
CLCN6-208ENST00000494028 LARS2Q15031 903 aaKnown RBP9.9□□□□□ -0.82
CLCN6-208ENST00000494028 GPR68Q15743 365 aa9.9□□□□□ -0.82
CLCN6-208ENST00000494028 ENTPD8Q5MY95 495 aa9.9□□□□□ -0.82
CLCN6-208ENST00000494028 MRPL2Q5T653 305 aaKnown RBP9.9□□□□□ -0.82
CLCN6-208ENST00000494028 SYT6Q5T7P8 510 aaPredicted RBP9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms