RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 EVI2BP34910 448 aa20.63■□□□□ 0.89
SNIP1-203ENST00000493916 PSMD4P55036 377 aaKnown RBP20.63■□□□□ 0.89
SNIP1-203ENST00000493916 CLDN8P56748 225 aa20.63■□□□□ 0.89
SNIP1-203ENST00000493916 PRR5P85299 388 aa20.63■□□□□ 0.89
SNIP1-203ENST00000493916 CRYZQ08257 329 aaKnown RBP20.63■□□□□ 0.89
SNIP1-203ENST00000493916 CDSNQ15517 529 aa20.63■□□□□ 0.89
SNIP1-203ENST00000493916 AGBL2Q5U5Z8 902 aa20.63■□□□□ 0.89
SNIP1-203ENST00000493916 ZCCHC12Q6PEW1 402 aa20.63■□□□□ 0.89
SNIP1-203ENST00000493916 PLCZ1Q86YW0 608 aa20.63■□□□□ 0.89
SNIP1-203ENST00000493916 FAM83FQ8NEG4 500 aaPredicted RBP20.63■□□□□ 0.89
SNIP1-203ENST00000493916 MGARPQ8TDB4 240 aa20.63■□□□□ 0.89
SNIP1-203ENST00000493916 OR5P2Q8WZ92 322 aa20.63■□□□□ 0.89
SNIP1-203ENST00000493916 RND1Q92730 232 aa20.63■□□□□ 0.89
SNIP1-203ENST00000493916 DTNBP1Q96EV8 351 aa20.63■□□□□ 0.89
SNIP1-203ENST00000493916 BHLHE41Q9C0J9 482 aaPredicted RBP20.63■□□□□ 0.89
SNIP1-203ENST00000493916 CHST11Q9NPF2 352 aa20.63■□□□□ 0.89
SNIP1-203ENST00000493916 SERHLQ9NQF3 203 aa20.63■□□□□ 0.89
SNIP1-203ENST00000493916 PNPOQ9NVS9 261 aa20.63■□□□□ 0.89
SNIP1-203ENST00000493916 THAP1Q9NVV9 213 aa20.63■□□□□ 0.89
SNIP1-203ENST00000493916 KCNH1O95259 989 aa20.62■□□□□ 0.89
SNIP1-203ENST00000493916 EFNA1P20827 205 aaPredicted RBP20.62■□□□□ 0.89
SNIP1-203ENST00000493916 GRNP28799 593 aaKnown RBP20.62■□□□□ 0.89
SNIP1-203ENST00000493916 GABRA3P34903 492 aa20.62■□□□□ 0.89
SNIP1-203ENST00000493916 PTGER4P35408 488 aa20.62■□□□□ 0.89
SNIP1-203ENST00000493916 PRKAG1P54619 331 aa20.62■□□□□ 0.89
SNIP1-203ENST00000493916 NUP107P57740 925 aa20.62■□□□□ 0.89
SNIP1-203ENST00000493916 TOMM20Q15388 145 aa20.62■□□□□ 0.89
SNIP1-203ENST00000493916 EIPR1Q53HC9 387 aa20.62■□□□□ 0.89
SNIP1-203ENST00000493916 EXOSC6Q5RKV6 272 aaKnown RBP20.62■□□□□ 0.89
SNIP1-203ENST00000493916 C1orf185Q5T7R7 199 aa20.62■□□□□ 0.89
SNIP1-203ENST00000493916 RTL6Q6ICC9 239 aa20.62■□□□□ 0.89
SNIP1-203ENST00000493916 MFSD12Q6NUT3 480 aa20.62■□□□□ 0.89
SNIP1-203ENST00000493916 B3GNT6Q6ZMB0 384 aa20.62■□□□□ 0.89
SNIP1-203ENST00000493916 SZRD1Q7Z422 152 aa20.62■□□□□ 0.89
SNIP1-203ENST00000493916 SDCCAG3Q96C92 435 aa20.62■□□□□ 0.89
SNIP1-203ENST00000493916 FAM120BQ96EK7 910 aaKnown RBP20.62■□□□□ 0.89
SNIP1-203ENST00000493916 TTYH2Q9BSA4 534 aa20.62■□□□□ 0.89
SNIP1-203ENST00000493916 NUF2Q9BZD4 464 aa20.62■□□□□ 0.89
SNIP1-203ENST00000493916 OR2B2Q9GZK3 357 aa20.62■□□□□ 0.89
SNIP1-203ENST00000493916 FAM120CQ9NX05 1096 aaKnown RBP20.62■□□□□ 0.89
SNIP1-203ENST00000493916 DNAJC13O75165 2243 aa20.62■□□□□ 0.89
SNIP1-203ENST00000493916 GXYLT2A0PJZ3 443 aa20.61■□□□□ 0.89
SNIP1-203ENST00000493916 FADS1O60427 444 aa20.61■□□□□ 0.89
SNIP1-203ENST00000493916 DIO3P55073 304 aa20.61■□□□□ 0.89
SNIP1-203ENST00000493916 PMPCAQ10713 525 aa20.61■□□□□ 0.89
SNIP1-203ENST00000493916 LSM12Q3MHD2 195 aaKnown RBP20.61■□□□□ 0.89
SNIP1-203ENST00000493916 WIPI1Q5MNZ9 446 aaPredicted RBP20.61■□□□□ 0.89
SNIP1-203ENST00000493916 ATG16L1Q676U5 607 aa20.61■□□□□ 0.89
SNIP1-203ENST00000493916 SP5Q6BEB4 398 aaPredicted RBP20.61■□□□□ 0.89
SNIP1-203ENST00000493916 VASNQ6EMK4 673 aa20.61■□□□□ 0.89
SNIP1-203ENST00000493916 TRIM42Q8IWZ5 723 aa20.61■□□□□ 0.89
SNIP1-203ENST00000493916 ULK2Q8IYT8 1036 aa20.61■□□□□ 0.89
SNIP1-203ENST00000493916 GPR151Q8TDV0 419 aa20.61■□□□□ 0.89
SNIP1-203ENST00000493916 NUDT8Q8WV74 236 aa20.61■□□□□ 0.89
SNIP1-203ENST00000493916 ASB5Q8WWX0 329 aa20.61■□□□□ 0.89
SNIP1-203ENST00000493916 TIMP4Q99727 224 aa20.61■□□□□ 0.89
SNIP1-203ENST00000493916 DUSP26Q9BV47 211 aa20.61■□□□□ 0.89
SNIP1-203ENST00000493916 PRDM14Q9GZV8 571 aa20.61■□□□□ 0.89
SNIP1-203ENST00000493916 NEUROD4Q9HD90 331 aa20.61■□□□□ 0.89
SNIP1-203ENST00000493916 ZCCHC3Q9NUD5 404 aaKnown RBP20.61■□□□□ 0.89
SNIP1-203ENST00000493916 GLI4P10075 376 aa20.6■□□□□ 0.89
SNIP1-203ENST00000493916 ACP2P11117 423 aa20.6■□□□□ 0.89
SNIP1-203ENST00000493916 CHRNB4P30926 498 aa20.6■□□□□ 0.89
SNIP1-203ENST00000493916 PRIM2P49643 509 aa20.6■□□□□ 0.89
SNIP1-203ENST00000493916 OGFOD2Q6N063 350 aa20.6■□□□□ 0.89
SNIP1-203ENST00000493916 PM20D2Q8IYS1 436 aa20.6■□□□□ 0.89
SNIP1-203ENST00000493916 CA5BP1Q8WTZ4 195 aa20.6■□□□□ 0.89
SNIP1-203ENST00000493916 PIK3R3Q92569 461 aa20.6■□□□□ 0.89
SNIP1-203ENST00000493916 SLC9A6Q92581 669 aa20.6■□□□□ 0.89
SNIP1-203ENST00000493916 RMND5BQ96G75 393 aaPredicted RBP20.6■□□□□ 0.89
SNIP1-203ENST00000493916 FLRT3Q9NZU0 649 aa20.6■□□□□ 0.89
SNIP1-203ENST00000493916 FBXL2Q9UKC9 423 aa20.6■□□□□ 0.89
SNIP1-203ENST00000493916 RNF6Q9Y252 685 aa20.6■□□□□ 0.89
SNIP1-203ENST00000493916 SLC6A5Q9Y345 797 aa20.6■□□□□ 0.89
SNIP1-203ENST00000493916 MRPS18CQ9Y3D5 142 aaKnown RBP20.6■□□□□ 0.89
SNIP1-203ENST00000493916 AHRRA9YTQ3 701 aa20.59■□□□□ 0.89
SNIP1-203ENST00000493916 C6orf47O95873 294 aa20.59■□□□□ 0.89
SNIP1-203ENST00000493916 ACTL6AO96019 429 aa20.59■□□□□ 0.89
SNIP1-203ENST00000493916 IGKV1D-16P01601 117 aa20.59■□□□□ 0.89
SNIP1-203ENST00000493916 BMP7P18075 431 aa20.59■□□□□ 0.89
SNIP1-203ENST00000493916 LBPP18428 481 aa20.59■□□□□ 0.89
SNIP1-203ENST00000493916 SRD5A2P31213 254 aa20.59■□□□□ 0.89
SNIP1-203ENST00000493916 GCKP35557 465 aa20.59■□□□□ 0.89
SNIP1-203ENST00000493916 YRDCQ86U90 279 aaKnown RBP20.59■□□□□ 0.89
SNIP1-203ENST00000493916 SLC16A11Q8NCK7 471 aa20.59■□□□□ 0.89
SNIP1-203ENST00000493916 OR56A1Q8NGH5 318 aa20.59■□□□□ 0.89
SNIP1-203ENST00000493916 SFXN5Q8TD22 340 aa20.59■□□□□ 0.89
SNIP1-203ENST00000493916 MOAP1Q96BY2 351 aa20.59■□□□□ 0.89
SNIP1-203ENST00000493916 UGT2B28Q9BY64 529 aa20.59■□□□□ 0.89
SNIP1-203ENST00000493916 CXorf36Q9H7Y0 433 aa20.59■□□□□ 0.89
SNIP1-203ENST00000493916 MANSC1Q9H8J5 431 aa20.59■□□□□ 0.89
SNIP1-203ENST00000493916 GIN1Q9NXP7 522 aa20.59■□□□□ 0.89
SNIP1-203ENST00000493916 PPP4R1LQ9P1A2 415 aa20.59■□□□□ 0.89
SNIP1-203ENST00000493916 SNX8Q9Y5X2 465 aa20.59■□□□□ 0.89
SNIP1-203ENST00000493916 PHF3Q92576 2039 aaKnown RBP20.59■□□□□ 0.89
SNIP1-203ENST00000493916 B4DXG7 233 aa20.58■□□□□ 0.89
SNIP1-203ENST00000493916 FAM47E-STBD1D6RA91 191 aa20.58■□□□□ 0.89
SNIP1-203ENST00000493916 SDHDO14521 159 aa20.58■□□□□ 0.89
SNIP1-203ENST00000493916 KLF11O14901 512 aa20.58■□□□□ 0.89
SNIP1-203ENST00000493916 HDAC3O15379 428 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms