RNA–Protein interactions for RNA: ENST00000493758.5

ITGB1-216, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-216ENST00000493758 MDKP21741 143 aaPredicted RBP2.8□□□□□ -1.96
ITGB1-216ENST00000493758 NF2P35240 595 aa2.8□□□□□ -1.96
ITGB1-216ENST00000493758 UGT1A3P35503 534 aa2.8□□□□□ -1.96
ITGB1-216ENST00000493758 EMDP50402 254 aa2.8□□□□□ -1.96
ITGB1-216ENST00000493758 RND3P61587 244 aa2.8□□□□□ -1.96
ITGB1-216ENST00000493758 RPL32P62910 135 aaKnown RBP2.8□□□□□ -1.96
ITGB1-216ENST00000493758 NOP14P78316 857 aaKnown RBP2.8□□□□□ -1.96
ITGB1-216ENST00000493758 EIF4EBP2Q13542 120 aaPredicted RBP2.8□□□□□ -1.96
ITGB1-216ENST00000493758 AGKQ53H12 422 aa2.8□□□□□ -1.96
ITGB1-216ENST00000493758 OR2B11Q5JQS5 317 aa2.8□□□□□ -1.96
ITGB1-216ENST00000493758 SPATA46Q5T0L3 261 aa2.8□□□□□ -1.96
ITGB1-216ENST00000493758 DCST2Q5T1A1 773 aa2.8□□□□□ -1.96
ITGB1-216ENST00000493758 IL23RQ5VWK5 629 aa2.8□□□□□ -1.96
ITGB1-216ENST00000493758 LIPKQ5VXJ0 399 aa2.8□□□□□ -1.96
ITGB1-216ENST00000493758 ZNF57Q68EA5 555 aaPredicted RBP2.8□□□□□ -1.96
ITGB1-216ENST00000493758 ZNF562Q6V9R5 426 aa2.8□□□□□ -1.96
ITGB1-216ENST00000493758 STAC2Q6ZMT1 411 aa2.8□□□□□ -1.96
ITGB1-216ENST00000493758 VPS36Q86VN1 386 aa2.8□□□□□ -1.96
ITGB1-216ENST00000493758 ARFGAP2Q8N6H7 521 aa2.8□□□□□ -1.96
ITGB1-216ENST00000493758 LINC01555Q8NAE3 123 aa2.8□□□□□ -1.96
ITGB1-216ENST00000493758 SPC24Q8NBT2 197 aa2.8□□□□□ -1.96
ITGB1-216ENST00000493758 WDR36Q8NI36 951 aaKnown RBP2.8□□□□□ -1.96
ITGB1-216ENST00000493758 EXOC6Q8TAG9 804 aa2.8□□□□□ -1.96
ITGB1-216ENST00000493758 PHYHIPQ92561 330 aa2.8□□□□□ -1.96
ITGB1-216ENST00000493758 SNX21Q969T3 373 aa2.8□□□□□ -1.96
ITGB1-216ENST00000493758 TMEM80Q96HE8 168 aa2.8□□□□□ -1.96
ITGB1-216ENST00000493758 COQ7Q99807 217 aa2.8□□□□□ -1.96
ITGB1-216ENST00000493758 HES7Q9BYE0 225 aa2.8□□□□□ -1.96
ITGB1-216ENST00000493758 NOTCH2Q04721 2471 aa2.79□□□□□ -1.96
ITGB1-216ENST00000493758 RAD54L2Q9Y4B4 1467 aa2.79□□□□□ -1.96
ITGB1-216ENST00000493758 USP6P35125 1406 aa2.79□□□□□ -1.96
ITGB1-216ENST00000493758 ALOX15BO15296 676 aa2.79□□□□□ -1.96
ITGB1-216ENST00000493758 HSF2BPO75031 334 aa2.79□□□□□ -1.96
ITGB1-216ENST00000493758 LYPLA1O75608 230 aaPredicted RBP2.79□□□□□ -1.96
ITGB1-216ENST00000493758 CD55P08174 381 aa2.79□□□□□ -1.96
ITGB1-216ENST00000493758 CYP11B1P15538 503 aa2.79□□□□□ -1.96
ITGB1-216ENST00000493758 GNSP15586 552 aa2.79□□□□□ -1.96
ITGB1-216ENST00000493758 COPB2P35606 906 aa2.79□□□□□ -1.96
ITGB1-216ENST00000493758 TRPC1P48995 793 aa2.79□□□□□ -1.96
ITGB1-216ENST00000493758 GPC3P51654 580 aa2.79□□□□□ -1.96
ITGB1-216ENST00000493758 DIO3P55073 304 aa2.79□□□□□ -1.96
ITGB1-216ENST00000493758 MRPS6P82932 125 aaKnown RBP2.79□□□□□ -1.96
ITGB1-216ENST00000493758 OTUD4Q01804 1114 aaKnown RBP2.79□□□□□ -1.96
ITGB1-216ENST00000493758 DPYSQ14117 519 aa2.79□□□□□ -1.96
ITGB1-216ENST00000493758 IL17AQ16552 155 aa2.79□□□□□ -1.96
ITGB1-216ENST00000493758 KYAT1Q16773 422 aa2.79□□□□□ -1.96
ITGB1-216ENST00000493758 KHDRBS2Q5VWX1 349 aaKnown RBP2.79□□□□□ -1.96
ITGB1-216ENST00000493758 CXCL17Q6UXB2 119 aa2.79□□□□□ -1.96
ITGB1-216ENST00000493758 PPP1R27Q86WC6 154 aa2.79□□□□□ -1.96
ITGB1-216ENST00000493758 MCOLN2Q8IZK6 566 aa2.79□□□□□ -1.96
ITGB1-216ENST00000493758 RNF175Q8N4F7 328 aa2.79□□□□□ -1.96
ITGB1-216ENST00000493758 CSNK1A1LQ8N752 337 aa2.79□□□□□ -1.96
ITGB1-216ENST00000493758 BBS1Q8NFJ9 593 aa2.79□□□□□ -1.96
ITGB1-216ENST00000493758 KRT35Q92764 455 aa2.79□□□□□ -1.96
ITGB1-216ENST00000493758 SLC25A38Q96DW6 304 aa2.79□□□□□ -1.96
ITGB1-216ENST00000493758 SDHCQ99643 169 aaPredicted RBP2.79□□□□□ -1.96
ITGB1-216ENST00000493758 GLT8D2Q9H1C3 349 aa2.79□□□□□ -1.96
ITGB1-216ENST00000493758 ABCG8Q9H221 673 aa2.79□□□□□ -1.96
ITGB1-216ENST00000493758 DUS2Q9NX74 493 aaKnown RBP2.79□□□□□ -1.96
ITGB1-216ENST00000493758 CWC25Q9NXE8 425 aaPredicted RBP2.79□□□□□ -1.96
ITGB1-216ENST00000493758 BCAP29Q9UHQ4 241 aa2.79□□□□□ -1.96
ITGB1-216ENST00000493758 L3MBTL1Q9Y468 752 aa2.79□□□□□ -1.96
ITGB1-216ENST00000493758 FKBP7Q9Y680 259 aa2.79□□□□□ -1.96
ITGB1-216ENST00000493758 METP08581 1390 aa2.78□□□□□ -1.96
ITGB1-216ENST00000493758 DDX39AO00148 427 aaKnown RBP2.78□□□□□ -1.96
ITGB1-216ENST00000493758 IMPA2O14732 288 aa2.78□□□□□ -1.96
ITGB1-216ENST00000493758 EMC8O43402 210 aa2.78□□□□□ -1.96
ITGB1-216ENST00000493758 PGK2P07205 417 aa2.78□□□□□ -1.96
ITGB1-216ENST00000493758 RPA1P27694 616 aa2.78□□□□□ -1.96
ITGB1-216ENST00000493758 PTPN6P29350 595 aa2.78□□□□□ -1.96
ITGB1-216ENST00000493758 MYBPC1Q00872 1141 aa2.78□□□□□ -1.96
ITGB1-216ENST00000493758 UBXN1Q04323 297 aa2.78□□□□□ -1.96
ITGB1-216ENST00000493758 DPYSL3Q14195 570 aa2.78□□□□□ -1.96
ITGB1-216ENST00000493758 EOGTQ5NDL2 527 aa2.78□□□□□ -1.96
ITGB1-216ENST00000493758 SLC10A5Q5PT55 438 aa2.78□□□□□ -1.96
ITGB1-216ENST00000493758 ETFRF1Q6IPR1 90 aa2.78□□□□□ -1.96
ITGB1-216ENST00000493758 IGFL2Q6UWQ7 119 aa2.78□□□□□ -1.96
ITGB1-216ENST00000493758 ADAMTSL2Q86TH1 951 aa2.78□□□□□ -1.96
ITGB1-216ENST00000493758 BATF2Q8N1L9 274 aa2.78□□□□□ -1.96
ITGB1-216ENST00000493758 CENPSQ8N2Z9 138 aa2.78□□□□□ -1.96
ITGB1-216ENST00000493758 ADIPOR1Q96A54 375 aa2.78□□□□□ -1.96
ITGB1-216ENST00000493758 CCDC43Q96MW1 224 aaKnown RBP2.78□□□□□ -1.96
ITGB1-216ENST00000493758 ZNF285Q96NJ3 590 aa2.78□□□□□ -1.96
ITGB1-216ENST00000493758 TSSK1BQ9BXA7 367 aa2.78□□□□□ -1.96
ITGB1-216ENST00000493758 ALDH8A1Q9H2A2 487 aaPredicted RBP2.78□□□□□ -1.96
ITGB1-216ENST00000493758 PNO1Q9NRX1 252 aaKnown RBP2.78□□□□□ -1.96
ITGB1-216ENST00000493758 MTRRQ9UBK8 725 aa2.78□□□□□ -1.96
ITGB1-216ENST00000493758 KCNN3Q9UGI6 736 aa2.78□□□□□ -1.96
ITGB1-216ENST00000493758 DNPEPQ9ULA0 475 aa2.78□□□□□ -1.96
ITGB1-216ENST00000493758 DUSP12Q9UNI6 340 aa2.78□□□□□ -1.96
ITGB1-216ENST00000493758 EIF3LQ9Y262 564 aaKnown RBP2.78□□□□□ -1.96
ITGB1-216ENST00000493758 TRIM49D1C9J1S8 452 aa2.77□□□□□ -1.97
ITGB1-216ENST00000493758 H3BTX0 84 aa2.77□□□□□ -1.97
ITGB1-216ENST00000493758 HTATSF1O43719 755 aaKnown RBP2.77□□□□□ -1.97
ITGB1-216ENST00000493758 NOL4O94818 638 aa2.77□□□□□ -1.97
ITGB1-216ENST00000493758 JCHAINP01591 159 aa2.77□□□□□ -1.97
ITGB1-216ENST00000493758 IGFBP1P08833 259 aaPredicted RBP2.77□□□□□ -1.97
ITGB1-216ENST00000493758 BCKDHAP12694 445 aa2.77□□□□□ -1.97
ITGB1-216ENST00000493758 PTBP1P26599 531 aaKnown RBP eCLIP2.77□□□□□ -1.97
ITGB1-216ENST00000493758 ZNF133P52736 654 aaPredicted RBP2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms