RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 DCST2Q5T1A1 773 aa11.48□□□□□ -0.57
SNX17-208ENST00000493711 ISLR2Q6UXK2 745 aa11.48□□□□□ -0.57
SNX17-208ENST00000493711 CALHM3Q86XJ0 350 aa11.48□□□□□ -0.57
SNX17-208ENST00000493711 HPS6Q86YV9 775 aa11.48□□□□□ -0.57
SNX17-208ENST00000493711 OR2T12Q8NG77 320 aa11.48□□□□□ -0.57
SNX17-208ENST00000493711 OR10A6Q8NH74 314 aa11.48□□□□□ -0.57
SNX17-208ENST00000493711 FAM110BQ8TC76 370 aa11.48□□□□□ -0.57
SNX17-208ENST00000493711 BRIX1Q8TDN6 353 aaKnown RBP11.48□□□□□ -0.57
SNX17-208ENST00000493711 PSMF1Q92530 271 aa11.48□□□□□ -0.57
SNX17-208ENST00000493711 CDS1Q92903 461 aa11.48□□□□□ -0.57
SNX17-208ENST00000493711 MCUR1Q96AQ8 359 aa11.48□□□□□ -0.57
SNX17-208ENST00000493711 SLC7A6OSQ96CW6 309 aaPredicted RBP11.48□□□□□ -0.57
SNX17-208ENST00000493711 CDRT15Q96T59 188 aa11.48□□□□□ -0.57
SNX17-208ENST00000493711 KCTD14Q9BQ13 255 aaPredicted RBP11.48□□□□□ -0.57
SNX17-208ENST00000493711 HOXD1Q9GZZ0 328 aa11.48□□□□□ -0.57
SNX17-208ENST00000493711 RNF32Q9H0A6 362 aa11.48□□□□□ -0.57
SNX17-208ENST00000493711 ALG2Q9H553 416 aa11.48□□□□□ -0.57
SNX17-208ENST00000493711 IKZF5Q9H5V7 419 aa11.48□□□□□ -0.57
SNX17-208ENST00000493711 CDCP1Q9H5V8 836 aa11.48□□□□□ -0.57
SNX17-208ENST00000493711 TRIM45Q9H8W5 580 aaPredicted RBP11.48□□□□□ -0.57
SNX17-208ENST00000493711 CACYBPQ9HB71 228 aaKnown RBP11.48□□□□□ -0.57
SNX17-208ENST00000493711 CMTM6Q9NX76 183 aa11.48□□□□□ -0.57
SNX17-208ENST00000493711 STMN3Q9NZ72 180 aa11.48□□□□□ -0.57
SNX17-208ENST00000493711 ANGPT4Q9Y264 503 aa11.48□□□□□ -0.57
SNX17-208ENST00000493711 DTX4Q9Y2E6 619 aa11.48□□□□□ -0.57
SNX17-208ENST00000493711 PCDHGA9Q9Y5G4 932 aaKnown RBP11.48□□□□□ -0.57
SNX17-208ENST00000493711 NPFFR2Q9Y5X5 522 aa11.48□□□□□ -0.57
SNX17-208ENST00000493711 FER1L5A0AVI2 2057 aa11.48□□□□□ -0.57
SNX17-208ENST00000493711 A0A0G2JPF8 293 aa11.47□□□□□ -0.57
SNX17-208ENST00000493711 ELOVL7A1L3X0 281 aa11.47□□□□□ -0.57
SNX17-208ENST00000493711 HNRNPCL2B2RXH8 293 aa11.47□□□□□ -0.57
SNX17-208ENST00000493711 HNRNPCL3B7ZW38 293 aa11.47□□□□□ -0.57
SNX17-208ENST00000493711 WWP2O00308 870 aa11.47□□□□□ -0.57
SNX17-208ENST00000493711 NME4O00746 187 aa11.47□□□□□ -0.57
SNX17-208ENST00000493711 TP53I11O14683 189 aa11.47□□□□□ -0.57
SNX17-208ENST00000493711 SLC28A2O43868 658 aa11.47□□□□□ -0.57
SNX17-208ENST00000493711 PRKNO60260 465 aaPredicted RBP11.47□□□□□ -0.57
SNX17-208ENST00000493711 STX11O75558 287 aa11.47□□□□□ -0.57
SNX17-208ENST00000493711 ITGA10O75578 1167 aa11.47□□□□□ -0.57
SNX17-208ENST00000493711 REM1O75628 298 aa11.47□□□□□ -0.57
SNX17-208ENST00000493711 PPM1BO75688 479 aa11.47□□□□□ -0.57
SNX17-208ENST00000493711 OR2J2O76002 312 aa11.47□□□□□ -0.57
SNX17-208ENST00000493711 PDE9AO76083 593 aa11.47□□□□□ -0.57
SNX17-208ENST00000493711 KCNK2O95069 426 aa11.47□□□□□ -0.57
SNX17-208ENST00000493711 CELA2AP08217 269 aa11.47□□□□□ -0.57
SNX17-208ENST00000493711 TFPTP0C1Z6 253 aa11.47□□□□□ -0.57
SNX17-208ENST00000493711 FBXO45P0C2W1 286 aa11.47□□□□□ -0.57
SNX17-208ENST00000493711 HNRNPCL4P0DMR1 293 aa11.47□□□□□ -0.57
SNX17-208ENST00000493711 ARAFP10398 606 aa11.47□□□□□ -0.57
SNX17-208ENST00000493711 ENDOUP21128 410 aaKnown RBP11.47□□□□□ -0.57
SNX17-208ENST00000493711 ITPKBP27987 946 aa11.47□□□□□ -0.57
SNX17-208ENST00000493711 IL12BP29460 328 aa11.47□□□□□ -0.57
SNX17-208ENST00000493711 PCGF2P35227 344 aa11.47□□□□□ -0.57
SNX17-208ENST00000493711 CCL11P51671 97 aa11.47□□□□□ -0.57
SNX17-208ENST00000493711 CDK6Q00534 326 aa11.47□□□□□ -0.57
SNX17-208ENST00000493711 BNIP2Q12982 314 aa11.47□□□□□ -0.57
SNX17-208ENST00000493711 SELPLGQ14242 412 aa11.47□□□□□ -0.57
SNX17-208ENST00000493711 REEP3Q6NUK4 255 aa11.47□□□□□ -0.57
SNX17-208ENST00000493711 NPSR1Q6W5P4 371 aa11.47□□□□□ -0.57
SNX17-208ENST00000493711 LRRC74BQ6ZQY2 392 aa11.47□□□□□ -0.57
SNX17-208ENST00000493711 NUP54Q7Z3B4 507 aa11.47□□□□□ -0.57
SNX17-208ENST00000493711 KRT73Q86Y46 540 aa11.47□□□□□ -0.57
SNX17-208ENST00000493711 MICU2Q8IYU8 434 aa11.47□□□□□ -0.57
SNX17-208ENST00000493711 TMEM156Q8N614 296 aa11.47□□□□□ -0.57
SNX17-208ENST00000493711 SIRT6Q8N6T7 355 aa11.47□□□□□ -0.57
SNX17-208ENST00000493711 BCORP1Q8N888 145 aa11.47□□□□□ -0.57
SNX17-208ENST00000493711 HIPK4Q8NE63 616 aa11.47□□□□□ -0.57
SNX17-208ENST00000493711 OR5D16Q8NGK9 328 aa11.47□□□□□ -0.57
SNX17-208ENST00000493711 FBXO27Q8NI29 283 aa11.47□□□□□ -0.57
SNX17-208ENST00000493711 BBS10Q8TAM1 723 aa11.47□□□□□ -0.57
SNX17-208ENST00000493711 FBXO30Q8TB52 745 aa11.47□□□□□ -0.57
SNX17-208ENST00000493711 THAP3Q8WTV1 239 aaPredicted RBP11.47□□□□□ -0.57
SNX17-208ENST00000493711 ASB15Q8WXK1 588 aa11.47□□□□□ -0.57
SNX17-208ENST00000493711 TM9SF4Q92544 642 aa11.47□□□□□ -0.57
SNX17-208ENST00000493711 TTC9Q92623 222 aa11.47□□□□□ -0.57
SNX17-208ENST00000493711 DIO2Q92813 273 aa11.47□□□□□ -0.57
SNX17-208ENST00000493711 RAB8BQ92930 207 aa11.47□□□□□ -0.57
SNX17-208ENST00000493711 POP5Q969H6 163 aaKnown RBP11.47□□□□□ -0.57
SNX17-208ENST00000493711 RMND5BQ96G75 393 aaPredicted RBP11.47□□□□□ -0.57
SNX17-208ENST00000493711 SGCZQ96LD1 299 aa11.47□□□□□ -0.57
SNX17-208ENST00000493711 ZNF583Q96ND8 569 aa11.47□□□□□ -0.57
SNX17-208ENST00000493711 COL21A1Q96P44 957 aa11.47□□□□□ -0.57
SNX17-208ENST00000493711 RASL10BQ96S79 203 aa11.47□□□□□ -0.57
SNX17-208ENST00000493711 SECISBP2Q96T21 854 aaKnown RBP11.47□□□□□ -0.57
SNX17-208ENST00000493711 SPATA5L1Q9BVQ7 753 aa11.47□□□□□ -0.57
SNX17-208ENST00000493711 MUC13Q9H3R2 512 aa11.47□□□□□ -0.57
SNX17-208ENST00000493711 SERHL2Q9H4I8 314 aa11.47□□□□□ -0.57
SNX17-208ENST00000493711 MTHFD2LQ9H903 347 aaPredicted RBP11.47□□□□□ -0.57
SNX17-208ENST00000493711 CPNE5Q9HCH3 593 aa11.47□□□□□ -0.57
SNX17-208ENST00000493711 BCL2L10Q9HD36 194 aa11.47□□□□□ -0.57
SNX17-208ENST00000493711 GPR83Q9NYM4 423 aa11.47□□□□□ -0.57
SNX17-208ENST00000493711 OR6C70A6NIJ9 312 aa11.46□□□□□ -0.57
SNX17-208ENST00000493711 MKRN2OSH3BPM6 223 aa11.46□□□□□ -0.57
SNX17-208ENST00000493711 GSTA4O15217 222 aa11.46□□□□□ -0.57
SNX17-208ENST00000493711 NADKO95544 446 aaPredicted RBP11.46□□□□□ -0.57
SNX17-208ENST00000493711 STAMBPO95630 424 aa11.46□□□□□ -0.57
SNX17-208ENST00000493711 IFNA14P01570 189 aa11.46□□□□□ -0.57
SNX17-208ENST00000493711 NGFRP08138 427 aa11.46□□□□□ -0.57
SNX17-208ENST00000493711 ABCD3P28288 659 aa11.46□□□□□ -0.57
SNX17-208ENST00000493711 HTR1EP28566 365 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms