RNA–Protein interactions for RNA: ENST00000493265.2

LIME1-208, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 2

Gene LIME1, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-208ENST00000493265 HOXB13Q92826 284 aaPredicted RBP15.85■□□□□ 0.13
LIME1-208ENST00000493265 MAL2Q969L2 176 aa15.85■□□□□ 0.13
LIME1-208ENST00000493265 BTBD2Q9BX70 525 aa15.85■□□□□ 0.13
LIME1-208ENST00000493265 KAT8Q9H7Z6 458 aaKnown RBP15.85■□□□□ 0.13
LIME1-208ENST00000493265 FBXO34Q9NWN3 711 aa15.85■□□□□ 0.13
LIME1-208ENST00000493265 GIN1Q9NXP7 522 aa15.85■□□□□ 0.13
LIME1-208ENST00000493265 NDE1Q9NXR1 346 aa15.85■□□□□ 0.13
LIME1-208ENST00000493265 GMPR2Q9P2T1 348 aaKnown RBP15.85■□□□□ 0.13
LIME1-208ENST00000493265 USP22Q9UPT9 525 aa15.85■□□□□ 0.13
LIME1-208ENST00000493265 NPFFR2Q9Y5X5 522 aa15.85■□□□□ 0.13
LIME1-208ENST00000493265 MED13Q9UHV7 2174 aa15.85■□□□□ 0.13
LIME1-208ENST00000493265 MKRN2OSH3BPM6 223 aa15.84■□□□□ 0.13
LIME1-208ENST00000493265 NME4O00746 187 aa15.84■□□□□ 0.13
LIME1-208ENST00000493265 KCNK2O95069 426 aa15.84■□□□□ 0.13
LIME1-208ENST00000493265 IGKV1D-16P01601 117 aa15.84■□□□□ 0.13
LIME1-208ENST00000493265 BCHEP06276 602 aa15.84■□□□□ 0.13
LIME1-208ENST00000493265 SFTPCP11686 197 aa15.84■□□□□ 0.13
LIME1-208ENST00000493265 CPOXP36551 454 aa15.84■□□□□ 0.13
LIME1-208ENST00000493265 PIGAP37287 484 aa15.84■□□□□ 0.13
LIME1-208ENST00000493265 POLE2P56282 527 aa15.84■□□□□ 0.13
LIME1-208ENST00000493265 CYP27C1Q4G0S4 372 aa15.84■□□□□ 0.13
LIME1-208ENST00000493265 ZNF468Q5VIY5 522 aaPredicted RBP15.84■□□□□ 0.13
LIME1-208ENST00000493265 DESI1Q6ICB0 168 aa15.84■□□□□ 0.13
LIME1-208ENST00000493265 C8orf82Q6P1X6 216 aaPredicted RBP15.84■□□□□ 0.13
LIME1-208ENST00000493265 SLC15A3Q8IY34 581 aa15.84■□□□□ 0.13
LIME1-208ENST00000493265 PGAM4Q8N0Y7 254 aa15.84■□□□□ 0.13
LIME1-208ENST00000493265 RNF148Q8N7C7 305 aa15.84■□□□□ 0.13
LIME1-208ENST00000493265 ANKFN1Q8N957 763 aa15.84■□□□□ 0.13
LIME1-208ENST00000493265 ADOQ96SZ5 270 aa15.84■□□□□ 0.13
LIME1-208ENST00000493265 CDRT15Q96T59 188 aa15.84■□□□□ 0.13
LIME1-208ENST00000493265 SPAG4Q9NPE6 437 aa15.84■□□□□ 0.13
LIME1-208ENST00000493265 PRAMEF27A3QJZ7 478 aa15.83■□□□□ 0.12
LIME1-208ENST00000493265 TMEM247A6NEH6 219 aa15.83■□□□□ 0.12
LIME1-208ENST00000493265 C5orf58C9J3I9 102 aa15.83■□□□□ 0.12
LIME1-208ENST00000493265 TO15178 435 aa15.83■□□□□ 0.12
LIME1-208ENST00000493265 GYG2O15488 501 aa15.83■□□□□ 0.12
LIME1-208ENST00000493265 ASNA1O43681 348 aa15.83■□□□□ 0.12
LIME1-208ENST00000493265 TNFRSF21O75509 655 aa15.83■□□□□ 0.12
LIME1-208ENST00000493265 CEACAM4O75871 244 aa15.83■□□□□ 0.12
LIME1-208ENST00000493265 WDPCPO95876 746 aa15.83■□□□□ 0.12
LIME1-208ENST00000493265 AGR2O95994 175 aa15.83■□□□□ 0.12
LIME1-208ENST00000493265 ATP6V1C1P21283 382 aa15.83■□□□□ 0.12
LIME1-208ENST00000493265 FBXW4P57775 412 aa15.83■□□□□ 0.12
LIME1-208ENST00000493265 HPCAP84074 193 aa15.83■□□□□ 0.12
LIME1-208ENST00000493265 LIPEQ05469 1076 aa15.83■□□□□ 0.12
LIME1-208ENST00000493265 MFAP5Q13361 173 aa15.83■□□□□ 0.12
LIME1-208ENST00000493265 OPN5Q6U736 354 aa15.83■□□□□ 0.12
LIME1-208ENST00000493265 ZAR1Q86SH2 424 aa15.83■□□□□ 0.12
LIME1-208ENST00000493265 ARMC10Q8N2F6 343 aa15.83■□□□□ 0.12
LIME1-208ENST00000493265 NFKBIDQ8NI38 313 aa15.83■□□□□ 0.12
LIME1-208ENST00000493265 UTP23Q9BRU9 249 aaKnown RBP15.83■□□□□ 0.12
LIME1-208ENST00000493265 HPF1Q9NWY4 346 aa15.83■□□□□ 0.12
LIME1-208ENST00000493265 TAS2R1Q9NYW7 299 aa15.83■□□□□ 0.12
LIME1-208ENST00000493265 P2RX2Q9UBL9 471 aa15.83■□□□□ 0.12
LIME1-208ENST00000493265 MRTO4Q9UKD2 239 aaKnown RBP15.83■□□□□ 0.12
LIME1-208ENST00000493265 DOCK10Q96BY6 2186 aa15.83■□□□□ 0.12
LIME1-208ENST00000493265 DOPEY2Q9Y3R5 2298 aa15.82■□□□□ 0.12
LIME1-208ENST00000493265 NPIPA5A0A0B4J1W7 369 aa15.82■□□□□ 0.12
LIME1-208ENST00000493265 NPIPA7E9PJI5 369 aa15.82■□□□□ 0.12
LIME1-208ENST00000493265 PPM1BO75688 479 aa15.82■□□□□ 0.12
LIME1-208ENST00000493265 ATP5HO75947 161 aa15.82■□□□□ 0.12
LIME1-208ENST00000493265 FBXO45P0C2W1 286 aa15.82■□□□□ 0.12
LIME1-208ENST00000493265 NPIPA8P0DM63 369 aa15.82■□□□□ 0.12
LIME1-208ENST00000493265 CD96P40200 585 aa15.82■□□□□ 0.12
LIME1-208ENST00000493265 CASRP41180 1078 aa15.82■□□□□ 0.12
LIME1-208ENST00000493265 MAGEA8P43361 318 aa15.82■□□□□ 0.12
LIME1-208ENST00000493265 RNF144AP50876 292 aaPredicted RBP15.82■□□□□ 0.12
LIME1-208ENST00000493265 ARG2P78540 354 aa15.82■□□□□ 0.12
LIME1-208ENST00000493265 TXNL4AP83876 142 aaKnown RBP15.82■□□□□ 0.12
LIME1-208ENST00000493265 FUT5Q11128 374 aa15.82■□□□□ 0.12
LIME1-208ENST00000493265 TUBA3CQ13748 450 aa15.82■□□□□ 0.12
LIME1-208ENST00000493265 GPR68Q15743 365 aa15.82■□□□□ 0.12
LIME1-208ENST00000493265 ARHGAP11BQ3KRB8 267 aa15.82■□□□□ 0.12
LIME1-208ENST00000493265 RPS26P11Q5JNZ5 115 aaPredicted RBP15.82■□□□□ 0.12
LIME1-208ENST00000493265 TUBA3EQ6PEY2 450 aa15.82■□□□□ 0.12
LIME1-208ENST00000493265 LYPD8Q6UX82 237 aa15.82■□□□□ 0.12
LIME1-208ENST00000493265 BNC2Q6ZN30 1099 aaPredicted RBP15.82■□□□□ 0.12
LIME1-208ENST00000493265 HMGN2P46Q86SG4 172 aa15.82■□□□□ 0.12
LIME1-208ENST00000493265 ZZZ3Q8IYH5 903 aa15.82■□□□□ 0.12
LIME1-208ENST00000493265 CYP4Z2PQ8N1L4 340 aa15.82■□□□□ 0.12
LIME1-208ENST00000493265 SLC15A4Q8N697 577 aa15.82■□□□□ 0.12
LIME1-208ENST00000493265 SLC38A5Q8WUX1 472 aa15.82■□□□□ 0.12
LIME1-208ENST00000493265 SLC7A6OSQ96CW6 309 aaPredicted RBP15.82■□□□□ 0.12
LIME1-208ENST00000493265 SPACA9Q96E40 222 aaPredicted RBP15.82■□□□□ 0.12
LIME1-208ENST00000493265 COL21A1Q96P44 957 aa15.82■□□□□ 0.12
LIME1-208ENST00000493265 SDF2Q99470 211 aa15.82■□□□□ 0.12
LIME1-208ENST00000493265 MKLN1Q9UL63 735 aa15.82■□□□□ 0.12
LIME1-208ENST00000493265 GMEB1Q9Y692 573 aa15.82■□□□□ 0.12
LIME1-208ENST00000493265 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.82■□□□□ 0.12
LIME1-208ENST00000493265 COL12A1Q99715 3063 aa15.82■□□□□ 0.12
LIME1-208ENST00000493265 K7EM74 188 aa15.81■□□□□ 0.12
LIME1-208ENST00000493265 FCMRO60667 390 aa15.81■□□□□ 0.12
LIME1-208ENST00000493265 UGT2B11O75310 529 aa15.81■□□□□ 0.12
LIME1-208ENST00000493265 SOX30O94993 753 aa15.81■□□□□ 0.12
LIME1-208ENST00000493265 H6PDO95479 791 aa15.81■□□□□ 0.12
LIME1-208ENST00000493265 IL33O95760 270 aa15.81■□□□□ 0.12
LIME1-208ENST00000493265 CHRM4P08173 479 aa15.81■□□□□ 0.12
LIME1-208ENST00000493265 TFPTP0C1Z6 253 aa15.81■□□□□ 0.12
LIME1-208ENST00000493265 CYP4B1P13584 511 aa15.81■□□□□ 0.12
LIME1-208ENST00000493265 TCN1P20061 433 aaPredicted RBP15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms