RNA–Protein interactions for RNA: ENST00000493030.6

TRIM11-204, Transcript of tripartite motif containing 11, humanhuman

TSL 1 (best) BASIC

Gene TRIM11, Length 5,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11-204ENST00000493030 PREBQ9HCU5 417 aa12.89□□□□□ -0.35
TRIM11-204ENST00000493030 GDE1Q9NZC3 331 aa12.89□□□□□ -0.35
TRIM11-204ENST00000493030 KCNIP1Q9NZI2 227 aa12.89□□□□□ -0.35
TRIM11-204ENST00000493030 ACAD8Q9UKU7 415 aa12.89□□□□□ -0.35
TRIM11-204ENST00000493030 DNAJC25-GNG10A0A024R161 153 aa12.89□□□□□ -0.35
TRIM11-204ENST00000493030 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.89□□□□□ -0.35
TRIM11-204ENST00000493030 ANTXRLA6NF34 631 aa12.89□□□□□ -0.35
TRIM11-204ENST00000493030 MTFR2Q6P444 385 aa12.89□□□□□ -0.35
TRIM11-204ENST00000493030 CDRT4Q8N9R6 151 aa12.89□□□□□ -0.35
TRIM11-204ENST00000493030 RTP4Q96DX8 246 aa12.89□□□□□ -0.35
TRIM11-204ENST00000493030 CDCA3Q99618 268 aaPredicted RBP12.89□□□□□ -0.35
TRIM11-204ENST00000493030 TREX2Q9BQ50 279 aaPredicted RBP12.89□□□□□ -0.35
TRIM11-204ENST00000493030 CDH20Q9HBT6 801 aa12.89□□□□□ -0.35
TRIM11-204ENST00000493030 DMRT3Q9NQL9 472 aa12.89□□□□□ -0.35
TRIM11-204ENST00000493030 MAN2C1Q9NTJ4 1040 aa12.89□□□□□ -0.35
TRIM11-204ENST00000493030 PHRF1Q9P1Y6 1649 aaKnown RBP12.89□□□□□ -0.35
TRIM11-204ENST00000493030 A0A0J9YY10 115 aa12.89□□□□□ -0.35
TRIM11-204ENST00000493030 SYT7O43581 403 aa12.89□□□□□ -0.35
TRIM11-204ENST00000493030 HSD17B1P14061 328 aa12.89□□□□□ -0.35
TRIM11-204ENST00000493030 RAB3BP20337 219 aa12.89□□□□□ -0.35
TRIM11-204ENST00000493030 IVDP26440 423 aa12.89□□□□□ -0.35
TRIM11-204ENST00000493030 EMP2P54851 167 aa12.89□□□□□ -0.35
TRIM11-204ENST00000493030 NKX3-2P78367 333 aa12.89□□□□□ -0.35
TRIM11-204ENST00000493030 COQ5Q5HYK3 327 aa12.89□□□□□ -0.35
TRIM11-204ENST00000493030 SFRP4Q6FHJ7 346 aaPredicted RBP12.89□□□□□ -0.35
TRIM11-204ENST00000493030 ASRGL1Q7L266 308 aa12.89□□□□□ -0.35
TRIM11-204ENST00000493030 PARS2Q7L3T8 475 aaKnown RBP12.89□□□□□ -0.35
TRIM11-204ENST00000493030 OR6C4Q8NGE1 309 aa12.89□□□□□ -0.35
TRIM11-204ENST00000493030 OR52E1Q8NGJ3 308 aa12.89□□□□□ -0.35
TRIM11-204ENST00000493030 KLF16Q9BXK1 252 aaPredicted RBP12.89□□□□□ -0.35
TRIM11-204ENST00000493030 ENTPD2Q9Y5L3 495 aa12.89□□□□□ -0.35
TRIM11-204ENST00000493030 OTOL1A6NHN0 477 aaPredicted RBP12.89□□□□□ -0.35
TRIM11-204ENST00000493030 EEF1E1-BLOC1S5C9J1V9 151 aa12.89□□□□□ -0.35
TRIM11-204ENST00000493030 PAGE3Q5JUK9 113 aa12.89□□□□□ -0.35
TRIM11-204ENST00000493030 HES5Q5TA89 166 aa12.89□□□□□ -0.35
TRIM11-204ENST00000493030 VWA5B2Q8N398 1253 aa12.89□□□□□ -0.35
TRIM11-204ENST00000493030 MS4A15Q8N5U1 240 aa12.89□□□□□ -0.35
TRIM11-204ENST00000493030 MYRFLQ96LU7 910 aa12.89□□□□□ -0.35
TRIM11-204ENST00000493030 SLC46A2Q9BY10 475 aa12.89□□□□□ -0.35
TRIM11-204ENST00000493030 A0A0A6YYH2 397 aa12.88□□□□□ -0.35
TRIM11-204ENST00000493030 A6NJ64 397 aa12.88□□□□□ -0.35
TRIM11-204ENST00000493030 H7C2Y5 167 aa12.88□□□□□ -0.35
TRIM11-204ENST00000493030 LCATP04180 440 aa12.88□□□□□ -0.35
TRIM11-204ENST00000493030 OSMP13725 252 aa12.88□□□□□ -0.35
TRIM11-204ENST00000493030 ZNF28P17035 718 aa12.88□□□□□ -0.35
TRIM11-204ENST00000493030 HLCSP50747 726 aa12.88□□□□□ -0.35
TRIM11-204ENST00000493030 AKR1C2P52895 323 aa12.88□□□□□ -0.35
TRIM11-204ENST00000493030 CDK3Q00526 305 aa12.88□□□□□ -0.35
TRIM11-204ENST00000493030 MFSD13AQ14CX5 517 aa12.88□□□□□ -0.35
TRIM11-204ENST00000493030 RNASE10Q5GAN6 216 aaKnown RBP12.88□□□□□ -0.35
TRIM11-204ENST00000493030 KDELC1Q6UW63 502 aa12.88□□□□□ -0.35
TRIM11-204ENST00000493030 CBARPQ8N350 705 aaPredicted RBP12.88□□□□□ -0.35
TRIM11-204ENST00000493030 SNIP1Q8TAD8 396 aaKnown RBP12.88□□□□□ -0.35
TRIM11-204ENST00000493030 METTL2AQ96IZ6 378 aaKnown RBP12.88□□□□□ -0.35
TRIM11-204ENST00000493030 UHRF1Q96T88 793 aaPredicted RBP12.88□□□□□ -0.35
TRIM11-204ENST00000493030 TAS2R3Q9NYW6 316 aa12.88□□□□□ -0.35
TRIM11-204ENST00000493030 RIMS3Q9UJD0 308 aa12.88□□□□□ -0.35
TRIM11-204ENST00000493030 PTRH2Q9Y3E5 179 aaKnown RBP12.88□□□□□ -0.35
TRIM11-204ENST00000493030 SLC9B1P1A6NJY1 282 aa12.88□□□□□ -0.35
TRIM11-204ENST00000493030 NDUFB2O95178 105 aa12.88□□□□□ -0.35
TRIM11-204ENST00000493030 METTL2BQ6P1Q9 378 aaKnown RBP12.88□□□□□ -0.35
TRIM11-204ENST00000493030 SYT14Q8NB59 555 aa12.88□□□□□ -0.35
TRIM11-204ENST00000493030 EMC3Q9P0I2 261 aa12.88□□□□□ -0.35
TRIM11-204ENST00000493030 USP36Q9P275 1121 aaKnown RBP12.88□□□□□ -0.35
TRIM11-204ENST00000493030 ADAM18Q9Y3Q7 739 aa12.88□□□□□ -0.35
TRIM11-204ENST00000493030 FBP2O00757 339 aa12.88□□□□□ -0.35
TRIM11-204ENST00000493030 HTR3BO95264 441 aa12.88□□□□□ -0.35
TRIM11-204ENST00000493030 CD79AP11912 226 aa12.88□□□□□ -0.35
TRIM11-204ENST00000493030 NTRK2Q16620 822 aa12.88□□□□□ -0.35
TRIM11-204ENST00000493030 TMEM205Q6UW68 189 aa12.88□□□□□ -0.35
TRIM11-204ENST00000493030 BAIAP2L2Q6UXY1 529 aa12.88□□□□□ -0.35
TRIM11-204ENST00000493030 DPPA4Q7L190 304 aa12.88□□□□□ -0.35
TRIM11-204ENST00000493030 MARVELD2Q8N4S9 558 aa12.88□□□□□ -0.35
TRIM11-204ENST00000493030 HORMAD2Q8N7B1 307 aa12.88□□□□□ -0.35
TRIM11-204ENST00000493030 ZMYND19Q96E35 227 aaPredicted RBP12.88□□□□□ -0.35
TRIM11-204ENST00000493030 FAM71F1Q96KD3 344 aaPredicted RBP12.88□□□□□ -0.35
TRIM11-204ENST00000493030 OR4K3Q96R72 315 aa12.88□□□□□ -0.35
TRIM11-204ENST00000493030 FUNDC2Q9BWH2 189 aa12.88□□□□□ -0.35
TRIM11-204ENST00000493030 NELFAQ9H3P2 528 aa12.88□□□□□ -0.35
TRIM11-204ENST00000493030 GSTO2Q9H4Y5 243 aa12.88□□□□□ -0.35
TRIM11-204ENST00000493030 SDK1Q7Z5N4 2213 aa12.88□□□□□ -0.35
TRIM11-204ENST00000493030 GPR39O43194 453 aa12.88□□□□□ -0.35
TRIM11-204ENST00000493030 ONECUT3O60422 494 aaPredicted RBP12.88□□□□□ -0.35
TRIM11-204ENST00000493030 XCR1P46094 333 aa12.88□□□□□ -0.35
TRIM11-204ENST00000493030 CFAP77Q6ZQR2 320 aa12.88□□□□□ -0.35
TRIM11-204ENST00000493030 MEX3DQ86XN8 651 aaKnown RBP12.88□□□□□ -0.35
TRIM11-204ENST00000493030 ZNF619Q8N2I2 560 aa12.88□□□□□ -0.35
TRIM11-204ENST00000493030 KDM1BQ8NB78 822 aa12.88□□□□□ -0.35
TRIM11-204ENST00000493030 NANOS1Q8WY41 292 aaKnown RBP12.88□□□□□ -0.35
TRIM11-204ENST00000493030 TM9SF4Q92544 642 aa12.88□□□□□ -0.35
TRIM11-204ENST00000493030 ERVK-19Q9WJR5 959 aa12.88□□□□□ -0.35
TRIM11-204ENST00000493030 F5H5K5 113 aa12.88□□□□□ -0.35
TRIM11-204ENST00000493030 H3BUI4 141 aa12.88□□□□□ -0.35
TRIM11-204ENST00000493030 LILRB3O75022 631 aa12.88□□□□□ -0.35
TRIM11-204ENST00000493030 DNAJB5O75953 348 aa12.88□□□□□ -0.35
TRIM11-204ENST00000493030 DDCP20711 480 aa12.88□□□□□ -0.35
TRIM11-204ENST00000493030 EIF2B1Q14232 305 aaKnown RBP12.88□□□□□ -0.35
TRIM11-204ENST00000493030 MICAQ29983 383 aa12.88□□□□□ -0.35
TRIM11-204ENST00000493030 LCTLQ6UWM7 567 aa12.88□□□□□ -0.35
TRIM11-204ENST00000493030 BEST3Q8N1M1 668 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms