RNA–Protein interactions for RNA: ENST00000492796.5

CDC42SE1-206, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 1,174 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-206ENST00000492796 SLC9A6Q92581 669 aa9.74□□□□□ -0.85
CDC42SE1-206ENST00000492796 SARAFQ96BY9 339 aa9.74□□□□□ -0.85
CDC42SE1-206ENST00000492796 CCDC120Q96HB5 630 aa9.74□□□□□ -0.85
CDC42SE1-206ENST00000492796 STACQ99469 402 aa9.74□□□□□ -0.85
CDC42SE1-206ENST00000492796 VKORC1Q9BQB6 163 aa9.74□□□□□ -0.85
CDC42SE1-206ENST00000492796 TP63Q9H3D4 680 aaPredicted RBP9.74□□□□□ -0.85
CDC42SE1-206ENST00000492796 EXO5Q9H790 373 aa9.74□□□□□ -0.85
CDC42SE1-206ENST00000492796 CXorf36Q9H7Y0 433 aa9.74□□□□□ -0.85
CDC42SE1-206ENST00000492796 GALNT9Q9HCQ5 603 aa9.74□□□□□ -0.85
CDC42SE1-206ENST00000492796 DUSP22Q9NRW4 184 aa9.74□□□□□ -0.85
CDC42SE1-206ENST00000492796 MEMO1Q9Y316 297 aa9.74□□□□□ -0.85
CDC42SE1-206ENST00000492796 SNX8Q9Y5X2 465 aa9.74□□□□□ -0.85
CDC42SE1-206ENST00000492796 GOLGA8QA0A0J9YX86 632 aa9.73□□□□□ -0.85
CDC42SE1-206ENST00000492796 GOLGA8OA6NCC3 632 aa9.73□□□□□ -0.85
CDC42SE1-206ENST00000492796 FIGNL2A6NMB9 653 aa9.73□□□□□ -0.85
CDC42SE1-206ENST00000492796 NPIPA2E9PIF3 369 aa9.73□□□□□ -0.85
CDC42SE1-206ENST00000492796 GOLGA8NF8WBI6 632 aa9.73□□□□□ -0.85
CDC42SE1-206ENST00000492796 NPIPA3F8WFD2 350 aa9.73□□□□□ -0.85
CDC42SE1-206ENST00000492796 ZNF195O14628 629 aa9.73□□□□□ -0.85
CDC42SE1-206ENST00000492796 GNB5O14775 395 aa9.73□□□□□ -0.85
CDC42SE1-206ENST00000492796 CFLARO15519 480 aa9.73□□□□□ -0.85
CDC42SE1-206ENST00000492796 ZNHIT1O43257 154 aa9.73□□□□□ -0.85
CDC42SE1-206ENST00000492796 ZG16O60844 167 aa9.73□□□□□ -0.85
CDC42SE1-206ENST00000492796 CBR3O75828 277 aa9.73□□□□□ -0.85
CDC42SE1-206ENST00000492796 TGDSO95455 350 aa9.73□□□□□ -0.85
CDC42SE1-206ENST00000492796 HMGN2P05204 90 aaKnown RBP9.73□□□□□ -0.85
CDC42SE1-206ENST00000492796 ALOX5P09917 674 aa9.73□□□□□ -0.85
CDC42SE1-206ENST00000492796 ACP2P11117 423 aa9.73□□□□□ -0.85
CDC42SE1-206ENST00000492796 LCN1P31025 176 aa9.73□□□□□ -0.85
CDC42SE1-206ENST00000492796 SOAT1P35610 550 aa9.73□□□□□ -0.85
CDC42SE1-206ENST00000492796 CCT3P49368 545 aaKnown RBP9.73□□□□□ -0.85
CDC42SE1-206ENST00000492796 CLK3P49761 638 aaKnown RBP9.73□□□□□ -0.85
CDC42SE1-206ENST00000492796 WNT3P56703 355 aa9.73□□□□□ -0.85
CDC42SE1-206ENST00000492796 HBA1P69905 142 aa9.73□□□□□ -0.85
CDC42SE1-206ENST00000492796 LRRC74AQ0VAA2 488 aa9.73□□□□□ -0.85
CDC42SE1-206ENST00000492796 TP53BP2Q13625 1128 aa9.73□□□□□ -0.85
CDC42SE1-206ENST00000492796 LASP1Q14847 261 aaKnown RBP9.73□□□□□ -0.85
CDC42SE1-206ENST00000492796 GSTA3Q16772 222 aa9.73□□□□□ -0.85
CDC42SE1-206ENST00000492796 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.73□□□□□ -0.85
CDC42SE1-206ENST00000492796 SLC9B1Q4ZJI4 515 aa9.73□□□□□ -0.85
CDC42SE1-206ENST00000492796 PDCD4Q53EL6 469 aaKnown RBP9.73□□□□□ -0.85
CDC42SE1-206ENST00000492796 NXNQ6DKJ4 435 aa9.73□□□□□ -0.85
CDC42SE1-206ENST00000492796 OR4F3Q6IEY1 312 aa9.73□□□□□ -0.85
CDC42SE1-206ENST00000492796 CDC73Q6P1J9 531 aa9.73□□□□□ -0.85
CDC42SE1-206ENST00000492796 MAVSQ7Z434 540 aa9.73□□□□□ -0.85
CDC42SE1-206ENST00000492796 WDR53Q7Z5U6 358 aaPredicted RBP9.73□□□□□ -0.85
CDC42SE1-206ENST00000492796 PLCZ1Q86YW0 608 aa9.73□□□□□ -0.85
CDC42SE1-206ENST00000492796 COX18Q8N8Q8 333 aa9.73□□□□□ -0.85
CDC42SE1-206ENST00000492796 GLB1L3Q8NCI6 653 aaPredicted RBP9.73□□□□□ -0.85
CDC42SE1-206ENST00000492796 SLC16A11Q8NCK7 471 aa9.73□□□□□ -0.85
CDC42SE1-206ENST00000492796 NEIL3Q8TAT5 605 aa9.73□□□□□ -0.85
CDC42SE1-206ENST00000492796 NUDT8Q8WV74 236 aa9.73□□□□□ -0.85
CDC42SE1-206ENST00000492796 PIK3R3Q92569 461 aa9.73□□□□□ -0.85
CDC42SE1-206ENST00000492796 JADE3Q92613 823 aa9.73□□□□□ -0.85
CDC42SE1-206ENST00000492796 RMND5BQ96G75 393 aaPredicted RBP9.73□□□□□ -0.85
CDC42SE1-206ENST00000492796 MAGEB18Q96M61 343 aa9.73□□□□□ -0.85
CDC42SE1-206ENST00000492796 GNRHR2Q96P88 292 aa9.73□□□□□ -0.85
CDC42SE1-206ENST00000492796 PHF12Q96QT6 1004 aa9.73□□□□□ -0.85
CDC42SE1-206ENST00000492796 G6PC3Q9BUM1 346 aa9.73□□□□□ -0.85
CDC42SE1-206ENST00000492796 ACTRT3Q9BYD9 372 aa9.73□□□□□ -0.85
CDC42SE1-206ENST00000492796 PIGUQ9H490 435 aa9.73□□□□□ -0.85
CDC42SE1-206ENST00000492796 WDR55Q9H6Y2 383 aaPredicted RBP9.73□□□□□ -0.85
CDC42SE1-206ENST00000492796 HHATLQ9HCP6 504 aa9.73□□□□□ -0.85
CDC42SE1-206ENST00000492796 SDHAF3Q9NRP4 125 aa9.73□□□□□ -0.85
CDC42SE1-206ENST00000492796 FAM120CQ9NX05 1096 aaKnown RBP9.73□□□□□ -0.85
CDC42SE1-206ENST00000492796 PCDHGB4Q9UN71 923 aa9.73□□□□□ -0.85
CDC42SE1-206ENST00000492796 FAF1Q9UNN5 650 aaPredicted RBP9.73□□□□□ -0.85
CDC42SE1-206ENST00000492796 PCDHGB3Q9Y5G1 929 aa9.73□□□□□ -0.85
CDC42SE1-206ENST00000492796 GPR45Q9Y5Y3 372 aa9.73□□□□□ -0.85
CDC42SE1-206ENST00000492796 USH1CQ9Y6N9 552 aa9.73□□□□□ -0.85
CDC42SE1-206ENST00000492796 NINQ8N4C6 2090 aa9.73□□□□□ -0.85
CDC42SE1-206ENST00000492796 DOPEY1Q5JWR5 2465 aa9.72□□□□□ -0.85
CDC42SE1-206ENST00000492796 PRSS51A0A1B0GVH4 220 aa9.72□□□□□ -0.85
CDC42SE1-206ENST00000492796 GXYLT2A0PJZ3 443 aa9.72□□□□□ -0.85
CDC42SE1-206ENST00000492796 DIAPH2O60879 1101 aa9.72□□□□□ -0.85
CDC42SE1-206ENST00000492796 SCN2BO60939 215 aa9.72□□□□□ -0.85
CDC42SE1-206ENST00000492796 WDR1O75083 606 aa9.72□□□□□ -0.85
CDC42SE1-206ENST00000492796 TRAPPC6AO75865 159 aa9.72□□□□□ -0.85
CDC42SE1-206ENST00000492796 NGFRP08138 427 aa9.72□□□□□ -0.85
CDC42SE1-206ENST00000492796 GP1BBP13224 206 aa9.72□□□□□ -0.85
CDC42SE1-206ENST00000492796 AGAP20933 346 aa9.72□□□□□ -0.85
CDC42SE1-206ENST00000492796 ENDOUP21128 410 aaKnown RBP9.72□□□□□ -0.85
CDC42SE1-206ENST00000492796 GCKP35557 465 aa9.72□□□□□ -0.85
CDC42SE1-206ENST00000492796 RFX3P48380 749 aa9.72□□□□□ -0.85
CDC42SE1-206ENST00000492796 SMSP52788 366 aa9.72□□□□□ -0.85
CDC42SE1-206ENST00000492796 GAS1P54826 345 aa9.72□□□□□ -0.85
CDC42SE1-206ENST00000492796 POU6F2P78424 691 aaPredicted RBP9.72□□□□□ -0.85
CDC42SE1-206ENST00000492796 DUSP5Q16690 384 aa9.72□□□□□ -0.85
CDC42SE1-206ENST00000492796 FAM174BQ3ZCQ3 159 aa9.72□□□□□ -0.85
CDC42SE1-206ENST00000492796 NHSL2Q5HYW2 709 aa9.72□□□□□ -0.85
CDC42SE1-206ENST00000492796 SPANXN4Q5MJ08 99 aa9.72□□□□□ -0.85
CDC42SE1-206ENST00000492796 WLSQ5T9L3 541 aa9.72□□□□□ -0.85
CDC42SE1-206ENST00000492796 TMEM211Q6ICI0 200 aa9.72□□□□□ -0.85
CDC42SE1-206ENST00000492796 EPGNQ6UW88 154 aa9.72□□□□□ -0.85
CDC42SE1-206ENST00000492796 ACAD11Q709F0 780 aa9.72□□□□□ -0.85
CDC42SE1-206ENST00000492796 MAMDC2Q7Z304 686 aaPredicted RBP9.72□□□□□ -0.85
CDC42SE1-206ENST00000492796 CLECL1Q8IZS7 167 aa9.72□□□□□ -0.85
CDC42SE1-206ENST00000492796 ZNF808Q8N4W9 903 aaPredicted RBP9.72□□□□□ -0.85
CDC42SE1-206ENST00000492796 WDSUB1Q8N9V3 476 aa9.72□□□□□ -0.85
CDC42SE1-206ENST00000492796 OR4A15Q8NGL6 344 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms