RNA–Protein interactions for RNA: ENST00000492650.1

VPS36-205, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 5

Gene VPS36, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-205ENST00000492650 WASH2PQ6VEQ5 465 aa2.82□□□□□ -1.96
VPS36-205ENST00000492650 CYP4V2Q6ZWL3 525 aaPredicted RBP2.82□□□□□ -1.96
VPS36-205ENST00000492650 KRTAP5-2Q701N4 177 aa2.82□□□□□ -1.96
VPS36-205ENST00000492650 CCDC80Q76M96 950 aa2.82□□□□□ -1.96
VPS36-205ENST00000492650 EIF3MQ7L2H7 374 aaKnown RBP2.82□□□□□ -1.96
VPS36-205ENST00000492650 CPEB2Q7Z5Q1 589 aaKnown RBP2.82□□□□□ -1.96
VPS36-205ENST00000492650 PRUNE1Q86TP1 453 aa2.82□□□□□ -1.96
VPS36-205ENST00000492650 VPS36Q86VN1 386 aa2.82□□□□□ -1.96
VPS36-205ENST00000492650 TPRA1Q86W33 373 aa2.82□□□□□ -1.96
VPS36-205ENST00000492650 MMD2Q8IY49 270 aa2.82□□□□□ -1.96
VPS36-205ENST00000492650 PRSS35Q8N3Z0 413 aa2.82□□□□□ -1.96
VPS36-205ENST00000492650 TRIML2Q8N7C3 387 aa2.82□□□□□ -1.96
VPS36-205ENST00000492650 SYT14Q8NB59 555 aa2.82□□□□□ -1.96
VPS36-205ENST00000492650 RNF149Q8NC42 400 aa2.82□□□□□ -1.96
VPS36-205ENST00000492650 NOA1Q8NC60 698 aaKnown RBP2.82□□□□□ -1.96
VPS36-205ENST00000492650 PPFIBP2Q8ND30 876 aa2.82□□□□□ -1.96
VPS36-205ENST00000492650 OR4C5Q8NGB2 326 aa2.82□□□□□ -1.96
VPS36-205ENST00000492650 OR4L1Q8NH43 312 aa2.82□□□□□ -1.96
VPS36-205ENST00000492650 LKAAEAR1Q8TD35 194 aa2.82□□□□□ -1.96
VPS36-205ENST00000492650 RNF128Q8TEB7 428 aa2.82□□□□□ -1.96
VPS36-205ENST00000492650 GLYATL2Q8WU03 294 aa2.82□□□□□ -1.96
VPS36-205ENST00000492650 SEPT8Q92599 483 aa2.82□□□□□ -1.96
VPS36-205ENST00000492650 KIAA1143Q96AT1 154 aaPredicted RBP2.82□□□□□ -1.96
VPS36-205ENST00000492650 RPRD1AQ96P16 312 aaPredicted RBP2.82□□□□□ -1.96
VPS36-205ENST00000492650 NDUFAF3Q9BU61 184 aa2.82□□□□□ -1.96
VPS36-205ENST00000492650 TRAF4Q9BUZ4 470 aaPredicted RBP2.82□□□□□ -1.96
VPS36-205ENST00000492650 FUNDC2Q9BWH2 189 aa2.82□□□□□ -1.96
VPS36-205ENST00000492650 SPATA16Q9BXB7 569 aa2.82□□□□□ -1.96
VPS36-205ENST00000492650 NUSAP1Q9BXS6 441 aaKnown RBP2.82□□□□□ -1.96
VPS36-205ENST00000492650 GSDMCQ9BYG8 508 aa2.82□□□□□ -1.96
VPS36-205ENST00000492650 KRTAP4-3Q9BYR4 195 aa2.82□□□□□ -1.96
VPS36-205ENST00000492650 STRADBQ9C0K7 418 aa2.82□□□□□ -1.96
VPS36-205ENST00000492650 VN1R1Q9GZP7 353 aa2.82□□□□□ -1.96
VPS36-205ENST00000492650 LAT2Q9GZY6 243 aa2.82□□□□□ -1.96
VPS36-205ENST00000492650 RGCCQ9H4X1 137 aa2.82□□□□□ -1.96
VPS36-205ENST00000492650 GEMIN7Q9H840 131 aaKnown RBP2.82□□□□□ -1.96
VPS36-205ENST00000492650 ACKR4Q9NPB9 350 aa2.82□□□□□ -1.96
VPS36-205ENST00000492650 CHRAC1Q9NRG0 131 aa2.82□□□□□ -1.96
VPS36-205ENST00000492650 SLC2A8Q9NY64 477 aa2.82□□□□□ -1.96
VPS36-205ENST00000492650 HACD3Q9P035 362 aa2.82□□□□□ -1.96
VPS36-205ENST00000492650 SATB2Q9UPW6 733 aa2.82□□□□□ -1.96
VPS36-205ENST00000492650 SPIN1Q9Y657 262 aaPredicted RBP2.82□□□□□ -1.96
VPS36-205ENST00000492650 CARMIL1Q5VZK9 1371 aa2.82□□□□□ -1.96
VPS36-205ENST00000492650 NINLQ9Y2I6 1382 aa2.82□□□□□ -1.96
VPS36-205ENST00000492650 ATP6AP2A0A1C7CYW4 349 aa2.81□□□□□ -1.96
VPS36-205ENST00000492650 ERICH2A1L162 156 aa2.81□□□□□ -1.96
VPS36-205ENST00000492650 CCDC162PA2VCL2 907 aa2.81□□□□□ -1.96
VPS36-205ENST00000492650 PALM2-AKAP2B1ALY0 433 aaPredicted RBP2.81□□□□□ -1.96
VPS36-205ENST00000492650 E5RGE8 158 aa2.81□□□□□ -1.96
VPS36-205ENST00000492650 PSMD11O00231 422 aa2.81□□□□□ -1.96
VPS36-205ENST00000492650 POLR1CO15160 346 aaPredicted RBP2.81□□□□□ -1.96
VPS36-205ENST00000492650 RRP8O43159 456 aaKnown RBP2.81□□□□□ -1.96
VPS36-205ENST00000492650 CHMP2AO43633 222 aa2.81□□□□□ -1.96
VPS36-205ENST00000492650 RNASEH1O60930 286 aaKnown RBP2.81□□□□□ -1.96
VPS36-205ENST00000492650 DUS4LO95620 317 aaKnown RBP2.81□□□□□ -1.96
VPS36-205ENST00000492650 TSPAN12O95859 305 aa2.81□□□□□ -1.96
VPS36-205ENST00000492650 SNAI1O95863 264 aaPredicted RBP2.81□□□□□ -1.96
VPS36-205ENST00000492650 TXNDC12O95881 172 aa2.81□□□□□ -1.96
VPS36-205ENST00000492650 LYNP07948 512 aa2.81□□□□□ -1.96
VPS36-205ENST00000492650 GSTA2P09210 222 aa2.81□□□□□ -1.96
VPS36-205ENST00000492650 ANXA4P09525 319 aaPredicted RBP2.81□□□□□ -1.96
VPS36-205ENST00000492650 CYP2B6P20813 491 aa2.81□□□□□ -1.96
VPS36-205ENST00000492650 PTNP21246 168 aa2.81□□□□□ -1.96
VPS36-205ENST00000492650 NT5EP21589 574 aa2.81□□□□□ -1.96
VPS36-205ENST00000492650 TUBG1P23258 451 aa2.81□□□□□ -1.96
VPS36-205ENST00000492650 GATA2P23769 480 aaPredicted RBP2.81□□□□□ -1.96
VPS36-205ENST00000492650 PSMA2P25787 234 aa2.81□□□□□ -1.96
VPS36-205ENST00000492650 DUTP33316 252 aaKnown RBP2.81□□□□□ -1.96
VPS36-205ENST00000492650 MNDAP41218 407 aa2.81□□□□□ -1.96
VPS36-205ENST00000492650 NAMPTP43490 491 aa2.81□□□□□ -1.96
VPS36-205ENST00000492650 RPS5P46782 204 aaKnown RBP2.81□□□□□ -1.96
VPS36-205ENST00000492650 CSNK1EP49674 416 aaKnown RBP2.81□□□□□ -1.96
VPS36-205ENST00000492650 XIAPP98170 497 aa2.81□□□□□ -1.96
VPS36-205ENST00000492650 ENPEPQ07075 957 aa2.81□□□□□ -1.96
VPS36-205ENST00000492650 LGALS3BPQ08380 585 aa2.81□□□□□ -1.96
VPS36-205ENST00000492650 ZNF415Q09FC8 603 aa2.81□□□□□ -1.96
VPS36-205ENST00000492650 CCDC173Q0VFZ6 552 aa2.81□□□□□ -1.96
VPS36-205ENST00000492650 GPR17Q13304 367 aa2.81□□□□□ -1.96
VPS36-205ENST00000492650 XRCC4Q13426 336 aa2.81□□□□□ -1.96
VPS36-205ENST00000492650 EXOSC2Q13868 293 aaKnown RBP2.81□□□□□ -1.96
VPS36-205ENST00000492650 COTL1Q14019 142 aa2.81□□□□□ -1.96
VPS36-205ENST00000492650 HEPACAMQ14CZ8 416 aa2.81□□□□□ -1.96
VPS36-205ENST00000492650 P2RY6Q15077 328 aa2.81□□□□□ -1.96
VPS36-205ENST00000492650 SYPL1Q16563 259 aa2.81□□□□□ -1.96
VPS36-205ENST00000492650 AANATQ16613 207 aa2.81□□□□□ -1.96
VPS36-205ENST00000492650 ALKBH6Q3KRA9 238 aa2.81□□□□□ -1.96
VPS36-205ENST00000492650 LINC01620Q4KN68 170 aa2.81□□□□□ -1.96
VPS36-205ENST00000492650 PLCXD3Q63HM9 321 aa2.81□□□□□ -1.96
VPS36-205ENST00000492650 AP1ARQ63HQ0 302 aa2.81□□□□□ -1.96
VPS36-205ENST00000492650 OR4A47Q6IF82 309 aa2.81□□□□□ -1.96
VPS36-205ENST00000492650 GOLGA7Q7Z5G4 137 aa2.81□□□□□ -1.96
VPS36-205ENST00000492650 VTCN1Q7Z7D3 282 aa2.81□□□□□ -1.96
VPS36-205ENST00000492650 ZNF554Q86TJ5 538 aa2.81□□□□□ -1.96
VPS36-205ENST00000492650 LRRC49Q8IUZ0 686 aa2.81□□□□□ -1.96
VPS36-205ENST00000492650 LGI2Q8N0V4 545 aa2.81□□□□□ -1.96
VPS36-205ENST00000492650 GTPBP8Q8N3Z3 284 aaPredicted RBP2.81□□□□□ -1.96
VPS36-205ENST00000492650 CPSF7Q8N684 471 aaKnown RBP2.81□□□□□ -1.96
VPS36-205ENST00000492650 KBTBD8Q8NFY9 601 aa2.81□□□□□ -1.96
VPS36-205ENST00000492650 OR4K14Q8NGD5 310 aa2.81□□□□□ -1.96
VPS36-205ENST00000492650 OR6M1Q8NGM8 313 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms