RNA–Protein interactions for RNA: ENST00000491592.1

RTN4-215, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 860 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-215ENST00000491592 PAQR5Q9NXK6 330 aaPredicted RBP4.43□□□□□ -1.7
RTN4-215ENST00000491592 SLC2A8Q9NY64 477 aa4.43□□□□□ -1.7
RTN4-215ENST00000491592 RSL24D1Q9UHA3 163 aaKnown RBP4.43□□□□□ -1.7
RTN4-215ENST00000491592 SLC25A13Q9UJS0 675 aa4.43□□□□□ -1.7
RTN4-215ENST00000491592 CDH9Q9ULB4 789 aa4.43□□□□□ -1.7
RTN4-215ENST00000491592 PRPF19Q9UMS4 504 aaKnown RBP4.43□□□□□ -1.7
RTN4-215ENST00000491592 CA5BQ9Y2D0 317 aa4.43□□□□□ -1.7
RTN4-215ENST00000491592 TMEM184BQ9Y519 407 aaPredicted RBP4.43□□□□□ -1.7
RTN4-215ENST00000491592 FADS3Q9Y5Q0 445 aa4.43□□□□□ -1.7
RTN4-215ENST00000491592 SCN4AP35499 1836 aa4.43□□□□□ -1.7
RTN4-215ENST00000491592 ZNFX1Q9P2E3 1918 aaKnown RBP4.42□□□□□ -1.7
RTN4-215ENST00000491592 FOCADQ5VW36 1801 aa4.42□□□□□ -1.7
RTN4-215ENST00000491592 GOLGA8QA0A0J9YX86 632 aa4.42□□□□□ -1.7
RTN4-215ENST00000491592 A0A1B0GUH1 482 aa4.42□□□□□ -1.7
RTN4-215ENST00000491592 TMEM247A6NEH6 219 aa4.42□□□□□ -1.7
RTN4-215ENST00000491592 ASB14A6NK59 587 aa4.42□□□□□ -1.7
RTN4-215ENST00000491592 C9JVG2 144 aa4.42□□□□□ -1.7
RTN4-215ENST00000491592 MCIDASD6RGH6 385 aa4.42□□□□□ -1.7
RTN4-215ENST00000491592 H3BQ06 376 aaPredicted RBP4.42□□□□□ -1.7
RTN4-215ENST00000491592 TRIM77I1YAP6 450 aa4.42□□□□□ -1.7
RTN4-215ENST00000491592 SLC28A1O00337 649 aa4.42□□□□□ -1.7
RTN4-215ENST00000491592 ABCD4O14678 606 aa4.42□□□□□ -1.7
RTN4-215ENST00000491592 SLC22A2O15244 555 aa4.42□□□□□ -1.7
RTN4-215ENST00000491592 HCN1O60741 890 aa4.42□□□□□ -1.7
RTN4-215ENST00000491592 PRAMEF11O60813 436 aa4.42□□□□□ -1.7
RTN4-215ENST00000491592 SDC3O75056 442 aa4.42□□□□□ -1.7
RTN4-215ENST00000491592 SUPT3HO75486 399 aa4.42□□□□□ -1.7
RTN4-215ENST00000491592 STX11O75558 287 aa4.42□□□□□ -1.7
RTN4-215ENST00000491592 RSL1D1O76021 490 aaKnown RBP4.42□□□□□ -1.7
RTN4-215ENST00000491592 BMP10O95393 424 aa4.42□□□□□ -1.7
RTN4-215ENST00000491592 ZBTB11O95625 1053 aaPredicted RBP4.42□□□□□ -1.7
RTN4-215ENST00000491592 C9P02748 559 aa4.42□□□□□ -1.7
RTN4-215ENST00000491592 MT-ND1P03886 318 aa4.42□□□□□ -1.7
RTN4-215ENST00000491592 ICAM1P05362 532 aa4.42□□□□□ -1.7
RTN4-215ENST00000491592 TMEM191BP0C7N4 346 aa4.42□□□□□ -1.7
RTN4-215ENST00000491592 FCGR2AP12318 317 aa4.42□□□□□ -1.7
RTN4-215ENST00000491592 CCL2P13500 99 aa4.42□□□□□ -1.7
RTN4-215ENST00000491592 IL7RP16871 459 aa4.42□□□□□ -1.7
RTN4-215ENST00000491592 ZNF23P17027 643 aa4.42□□□□□ -1.7
RTN4-215ENST00000491592 BGNP21810 368 aa4.42□□□□□ -1.7
RTN4-215ENST00000491592 UGT1A1P22309 533 aa4.42□□□□□ -1.7
RTN4-215ENST00000491592 DGKAP23743 735 aa4.42□□□□□ -1.7
RTN4-215ENST00000491592 PDHA2P29803 388 aa4.42□□□□□ -1.7
RTN4-215ENST00000491592 HMOX2P30519 316 aa4.42□□□□□ -1.7
RTN4-215ENST00000491592 LCN1P31025 176 aa4.42□□□□□ -1.7
RTN4-215ENST00000491592 HOXA9P31269 272 aa4.42□□□□□ -1.7
RTN4-215ENST00000491592 FCGR2BP31994 310 aaPredicted RBP4.42□□□□□ -1.7
RTN4-215ENST00000491592 DCTDP32321 178 aa4.42□□□□□ -1.7
RTN4-215ENST00000491592 ADRA1AP35348 466 aa4.42□□□□□ -1.7
RTN4-215ENST00000491592 NAA10P41227 235 aaPredicted RBP4.42□□□□□ -1.7
RTN4-215ENST00000491592 NAMPTP43490 491 aa4.42□□□□□ -1.7
RTN4-215ENST00000491592 RPS5P46782 204 aaKnown RBP4.42□□□□□ -1.7
RTN4-215ENST00000491592 ALDH3B2P48448 385 aa4.42□□□□□ -1.7
RTN4-215ENST00000491592 CSNK1EP49674 416 aaKnown RBP4.42□□□□□ -1.7
RTN4-215ENST00000491592 SLC26A2P50443 739 aa4.42□□□□□ -1.7
RTN4-215ENST00000491592 SERPINB9P50453 376 aa4.42□□□□□ -1.7
RTN4-215ENST00000491592 SLC7A2P52569 658 aa4.42□□□□□ -1.7
RTN4-215ENST00000491592 EFNA5P52803 228 aa4.42□□□□□ -1.7
RTN4-215ENST00000491592 IST1P53990 364 aa4.42□□□□□ -1.7
RTN4-215ENST00000491592 AQP4P55087 323 aa4.42□□□□□ -1.7
RTN4-215ENST00000491592 CDH4P55283 916 aa4.42□□□□□ -1.7
RTN4-215ENST00000491592 PSMC5P62195 406 aa4.42□□□□□ -1.7
RTN4-215ENST00000491592 RPS13P62277 151 aaKnown RBP4.42□□□□□ -1.7
RTN4-215ENST00000491592 ESRRGP62508 458 aa4.42□□□□□ -1.7
RTN4-215ENST00000491592 CSNK1G2P78368 415 aa4.42□□□□□ -1.7
RTN4-215ENST00000491592 S100A12P80511 92 aa4.42□□□□□ -1.7
RTN4-215ENST00000491592 GHRHRQ02643 423 aa4.42□□□□□ -1.7
RTN4-215ENST00000491592 SRSF4Q08170 494 aaKnown RBP4.42□□□□□ -1.7
RTN4-215ENST00000491592 FGL1Q08830 312 aa4.42□□□□□ -1.7
RTN4-215ENST00000491592 DLG1Q12959 904 aa4.42□□□□□ -1.7
RTN4-215ENST00000491592 STX3Q13277 289 aa4.42□□□□□ -1.7
RTN4-215ENST00000491592 ART3Q13508 389 aa4.42□□□□□ -1.7
RTN4-215ENST00000491592 NAE1Q13564 534 aa4.42□□□□□ -1.7
RTN4-215ENST00000491592 TFDP1Q14186 410 aa4.42□□□□□ -1.7
RTN4-215ENST00000491592 SHBQ15464 509 aa4.42□□□□□ -1.7
RTN4-215ENST00000491592 CCDC153Q494R4 210 aa4.42□□□□□ -1.7
RTN4-215ENST00000491592 DDX60LQ5H9U9 1706 aaKnown RBP4.42□□□□□ -1.7
RTN4-215ENST00000491592 CLVS2Q5SYC1 327 aa4.42□□□□□ -1.7
RTN4-215ENST00000491592 LCN1P1Q5VSP4 162 aa4.42□□□□□ -1.7
RTN4-215ENST00000491592 METTL21CQ5VZV1 264 aa4.42□□□□□ -1.7
RTN4-215ENST00000491592 TTC23Q5W5X9 447 aa4.42□□□□□ -1.7
RTN4-215ENST00000491592 PLEKHA7Q6IQ23 1121 aa4.42□□□□□ -1.7
RTN4-215ENST00000491592 C4orf22Q6V702 233 aa4.42□□□□□ -1.7
RTN4-215ENST00000491592 TIFABQ6ZNK6 161 aa4.42□□□□□ -1.7
RTN4-215ENST00000491592 Q6ZPB1 254 aaPredicted RBP4.42□□□□□ -1.7
RTN4-215ENST00000491592 USP50Q70EL3 339 aaPredicted RBP4.42□□□□□ -1.7
RTN4-215ENST00000491592 SSX9Q7RTT3 188 aa4.42□□□□□ -1.7
RTN4-215ENST00000491592 PRUNE1Q86TP1 453 aa4.42□□□□□ -1.7
RTN4-215ENST00000491592 SETD3Q86TU7 594 aaPredicted RBP4.42□□□□□ -1.7
RTN4-215ENST00000491592 SLC47A2Q86VL8 602 aa4.42□□□□□ -1.7
RTN4-215ENST00000491592 SLC26A11Q86WA9 606 aa4.42□□□□□ -1.7
RTN4-215ENST00000491592 PHF13Q86YI8 300 aaPredicted RBP4.42□□□□□ -1.7
RTN4-215ENST00000491592 CHERPQ8IWX8 916 aaKnown RBP4.42□□□□□ -1.7
RTN4-215ENST00000491592 GCNT2Q8N0V5 402 aa4.42□□□□□ -1.7
RTN4-215ENST00000491592 FBXO39Q8N4B4 442 aa4.42□□□□□ -1.7
RTN4-215ENST00000491592 FBXL13Q8NEE6 735 aa4.42□□□□□ -1.7
RTN4-215ENST00000491592 OR7G1Q8NGA0 311 aa4.42□□□□□ -1.7
RTN4-215ENST00000491592 OR8J2Q8NGG1 315 aa4.42□□□□□ -1.7
RTN4-215ENST00000491592 OR13C9Q8NGT0 318 aa4.42□□□□□ -1.7
RTN4-215ENST00000491592 KCNG3Q8TAE7 436 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms