RNA–Protein interactions for RNA: ENST00000491421.5

LSM2-213, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 820 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-213ENST00000491421 POLDIP3Q9BY77 421 aaKnown RBP7.5□□□□□ -1.21
LSM2-213ENST00000491421 ANKZF1Q9H8Y5 726 aa7.5□□□□□ -1.21
LSM2-213ENST00000491421 MKS1Q9NXB0 559 aa7.5□□□□□ -1.21
LSM2-213ENST00000491421 DNAJB12Q9NXW2 375 aaKnown RBP7.5□□□□□ -1.21
LSM2-213ENST00000491421 CRIM1Q9NZV1 1036 aa7.5□□□□□ -1.21
LSM2-213ENST00000491421 FOXD3Q9UJU5 478 aaPredicted RBP7.5□□□□□ -1.21
LSM2-213ENST00000491421 MRTO4Q9UKD2 239 aaKnown RBP7.5□□□□□ -1.21
LSM2-213ENST00000491421 CBLCQ9ULV8 474 aa7.5□□□□□ -1.21
LSM2-213ENST00000491421 ABCG2Q9UNQ0 655 aa7.5□□□□□ -1.21
LSM2-213ENST00000491421 RPH3AQ9Y2J0 694 aaPredicted RBP7.5□□□□□ -1.21
LSM2-213ENST00000491421 MRPS18CQ9Y3D5 142 aaKnown RBP7.5□□□□□ -1.21
LSM2-213ENST00000491421 CLCA1A8K7I4 914 aa7.49□□□□□ -1.21
LSM2-213ENST00000491421 C17orf51A8MQB3 221 aa7.49□□□□□ -1.21
LSM2-213ENST00000491421 AKAP10O43572 662 aa7.49□□□□□ -1.21
LSM2-213ENST00000491421 FADS1O60427 444 aa7.49□□□□□ -1.21
LSM2-213ENST00000491421 ZIC3O60481 467 aa7.49□□□□□ -1.21
LSM2-213ENST00000491421 CTAG2O75638 210 aa7.49□□□□□ -1.21
LSM2-213ENST00000491421 KCNH1O95259 989 aa7.49□□□□□ -1.21
LSM2-213ENST00000491421 IL33O95760 270 aa7.49□□□□□ -1.21
LSM2-213ENST00000491421 IL18BPO95998 194 aa7.49□□□□□ -1.21
LSM2-213ENST00000491421 IFI6P09912 130 aa7.49□□□□□ -1.21
LSM2-213ENST00000491421 NUDT17P0C025 328 aa7.49□□□□□ -1.21
LSM2-213ENST00000491421 PRPS2P11908 318 aa7.49□□□□□ -1.21
LSM2-213ENST00000491421 ZNF708P17019 499 aa7.49□□□□□ -1.21
LSM2-213ENST00000491421 SDC1P18827 310 aa7.49□□□□□ -1.21
LSM2-213ENST00000491421 CHMP24386 653 aa7.49□□□□□ -1.21
LSM2-213ENST00000491421 ALDH3A1P30838 453 aa7.49□□□□□ -1.21
LSM2-213ENST00000491421 GPC1P35052 558 aa7.49□□□□□ -1.21
LSM2-213ENST00000491421 CLK3P49761 638 aaKnown RBP7.49□□□□□ -1.21
LSM2-213ENST00000491421 LHX2P50458 406 aa7.49□□□□□ -1.21
LSM2-213ENST00000491421 PSMD4P55036 377 aaKnown RBP7.49□□□□□ -1.21
LSM2-213ENST00000491421 DSCR4P56555 118 aaPredicted RBP7.49□□□□□ -1.21
LSM2-213ENST00000491421 VSNL1P62760 191 aa7.49□□□□□ -1.21
LSM2-213ENST00000491421 FOXF2Q12947 444 aa7.49□□□□□ -1.21
LSM2-213ENST00000491421 STX5Q13190 355 aa7.49□□□□□ -1.21
LSM2-213ENST00000491421 GAB1Q13480 694 aa7.49□□□□□ -1.21
LSM2-213ENST00000491421 TESK1Q15569 626 aa7.49□□□□□ -1.21
LSM2-213ENST00000491421 GALNTL6Q49A17 601 aa7.49□□□□□ -1.21
LSM2-213ENST00000491421 FLYWCH1Q4VC44 716 aa7.49□□□□□ -1.21
LSM2-213ENST00000491421 RAET1LQ5VY80 246 aa7.49□□□□□ -1.21
LSM2-213ENST00000491421 PLXDC2Q6UX71 529 aa7.49□□□□□ -1.21
LSM2-213ENST00000491421 RNF165Q6ZSG1 346 aa7.49□□□□□ -1.21
LSM2-213ENST00000491421 Q6ZSR9 355 aa7.49□□□□□ -1.21
LSM2-213ENST00000491421 ZNF551Q7Z340 670 aaPredicted RBP7.49□□□□□ -1.21
LSM2-213ENST00000491421 SZRD1Q7Z422 152 aa7.49□□□□□ -1.21
LSM2-213ENST00000491421 ADGRE4PQ86SQ3 457 aa7.49□□□□□ -1.21
LSM2-213ENST00000491421 TRABD2AQ86V40 505 aa7.49□□□□□ -1.21
LSM2-213ENST00000491421 KIF18BQ86Y91 864 aa7.49□□□□□ -1.21
LSM2-213ENST00000491421 BANPQ8N9N5 519 aa7.49□□□□□ -1.21
LSM2-213ENST00000491421 CLHC1Q8NHS4 586 aa7.49□□□□□ -1.21
LSM2-213ENST00000491421 ZFP28Q8NHY6 868 aa7.49□□□□□ -1.21
LSM2-213ENST00000491421 FAM222BQ8WU58 562 aa7.49□□□□□ -1.21
LSM2-213ENST00000491421 NRGNQ92686 78 aa7.49□□□□□ -1.21
LSM2-213ENST00000491421 WNT2BQ93097 391 aa7.49□□□□□ -1.21
LSM2-213ENST00000491421 CIDECQ96AQ7 238 aaPredicted RBP7.49□□□□□ -1.21
LSM2-213ENST00000491421 ZBED6CLQ96FA7 236 aaPredicted RBP7.49□□□□□ -1.21
LSM2-213ENST00000491421 ZNF764Q96H86 408 aaPredicted RBP7.49□□□□□ -1.21
LSM2-213ENST00000491421 FCRL1Q96LA6 429 aa7.49□□□□□ -1.21
LSM2-213ENST00000491421 ZFP3Q96NJ6 502 aa7.49□□□□□ -1.21
LSM2-213ENST00000491421 TSSK3Q96PN8 268 aa7.49□□□□□ -1.21
LSM2-213ENST00000491421 FAM111AQ96PZ2 611 aa7.49□□□□□ -1.21
LSM2-213ENST00000491421 GPATCH1Q9BRR8 931 aaKnown RBP7.49□□□□□ -1.21
LSM2-213ENST00000491421 LMF2Q9BU23 707 aaKnown RBP7.49□□□□□ -1.21
LSM2-213ENST00000491421 SFXN3Q9BWM7 321 aa7.49□□□□□ -1.21
LSM2-213ENST00000491421 CLEC4MQ9H2X3 399 aaPredicted RBP7.49□□□□□ -1.21
LSM2-213ENST00000491421 ACBD3Q9H3P7 528 aa7.49□□□□□ -1.21
LSM2-213ENST00000491421 DSN1Q9H410 356 aa7.49□□□□□ -1.21
LSM2-213ENST00000491421 TUBB1Q9H4B7 451 aa7.49□□□□□ -1.21
LSM2-213ENST00000491421 REEP4Q9H6H4 257 aa7.49□□□□□ -1.21
LSM2-213ENST00000491421 C3orf14Q9HBI5 128 aa7.49□□□□□ -1.21
LSM2-213ENST00000491421 EML4Q9HC35 981 aaKnown RBP7.49□□□□□ -1.21
LSM2-213ENST00000491421 EQTNQ9NQ60 294 aa7.49□□□□□ -1.21
LSM2-213ENST00000491421 SDHAF3Q9NRP4 125 aa7.49□□□□□ -1.21
LSM2-213ENST00000491421 FAM120CQ9NX05 1096 aaKnown RBP7.49□□□□□ -1.21
LSM2-213ENST00000491421 FLRT3Q9NZU0 649 aa7.49□□□□□ -1.21
LSM2-213ENST00000491421 TMED5Q9Y3A6 229 aa7.49□□□□□ -1.21
LSM2-213ENST00000491421 DNAJC15Q9Y5T4 150 aa7.49□□□□□ -1.21
LSM2-213ENST00000491421 ANKRD17O75179 2603 aaKnown RBP7.49□□□□□ -1.21
LSM2-213ENST00000491421 ANKHD1Q8IWZ3 2542 aaKnown RBP7.49□□□□□ -1.21
LSM2-213ENST00000491421 PHF3Q92576 2039 aaKnown RBP7.49□□□□□ -1.21
LSM2-213ENST00000491421 EML6Q6ZMW3 1958 aa7.48□□□□□ -1.21
LSM2-213ENST00000491421 HIVEP1P15822 2718 aa7.48□□□□□ -1.21
LSM2-213ENST00000491421 hCG_2014768A0A024R1R8 64 aa7.48□□□□□ -1.21
LSM2-213ENST00000491421 GXYLT2A0PJZ3 443 aa7.48□□□□□ -1.21
LSM2-213ENST00000491421 TUBAL3A6NHL2 446 aa7.48□□□□□ -1.21
LSM2-213ENST00000491421 TTC36A6NLP5 189 aa7.48□□□□□ -1.21
LSM2-213ENST00000491421 A6NNC1 897 aa7.48□□□□□ -1.21
LSM2-213ENST00000491421 TMEM233B4DJY2 109 aa7.48□□□□□ -1.21
LSM2-213ENST00000491421 B4DXG7 233 aa7.48□□□□□ -1.21
LSM2-213ENST00000491421 PIP5K1BO14986 540 aa7.48□□□□□ -1.21
LSM2-213ENST00000491421 LSM1O15116 133 aaKnown RBP7.48□□□□□ -1.21
LSM2-213ENST00000491421 NPHS1O60500 1241 aa7.48□□□□□ -1.21
LSM2-213ENST00000491421 TBX19O60806 448 aa7.48□□□□□ -1.21
LSM2-213ENST00000491421 SPAG7O75391 227 aa7.48□□□□□ -1.21
LSM2-213ENST00000491421 RCBTB2O95199 551 aa7.48□□□□□ -1.21
LSM2-213ENST00000491421 UTS2O95399 124 aa7.48□□□□□ -1.21
LSM2-213ENST00000491421 CHRNGP07510 517 aa7.48□□□□□ -1.21
LSM2-213ENST00000491421 CD1EP15812 388 aa7.48□□□□□ -1.21
LSM2-213ENST00000491421 HK1P19367 917 aa7.48□□□□□ -1.21
LSM2-213ENST00000491421 DNAJA1P31689 397 aaKnown RBP7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms