RNA–Protein interactions for RNA: ENST00000490839.1

AGAP3-222, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 3, human

TSL 4

Gene AGAP3, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
AGAP3-222	ENST00000490839	ZBTB26	Q9HCK0	441 aa		13.71	□□□□□ -0.21
AGAP3-222	ENST00000490839	PFDN4	Q9NQP4	134 aa		13.71	□□□□□ -0.21
AGAP3-222	ENST00000490839	NMRK1	Q9NWW6	199 aa		13.71	□□□□□ -0.21
AGAP3-222	ENST00000490839	GRHL1	Q9NZI5	618 aa		13.71	□□□□□ -0.21
AGAP3-222	ENST00000490839	EMC9	Q9Y3B6	208 aa		13.71	□□□□□ -0.21
AGAP3-222	ENST00000490839	ZNF337	Q9Y3M9	751 aa		13.71	□□□□□ -0.21
AGAP3-222	ENST00000490839	CR1	P17927	2039 aa		13.7	□□□□□ -0.22
AGAP3-222	ENST00000490839	UQCRHL	A0A096LP55	91 aa		13.7	□□□□□ -0.22
AGAP3-222	ENST00000490839		A0A096LPK6	155 aa		13.7	□□□□□ -0.22
AGAP3-222	ENST00000490839	OR2M5	A3KFT3	312 aa		13.7	□□□□□ -0.22
AGAP3-222	ENST00000490839		H3BML4	177 aa		13.7	□□□□□ -0.22
AGAP3-222	ENST00000490839	STX16-NPEPL1	H3BU86	382 aa		13.7	□□□□□ -0.22
AGAP3-222	ENST00000490839	STX16	O14662	325 aa		13.7	□□□□□ -0.22
AGAP3-222	ENST00000490839	IFNA2	P01563	188 aa		13.7	□□□□□ -0.22
AGAP3-222	ENST00000490839	SERPINB8	P50452	374 aa		13.7	□□□□□ -0.22
AGAP3-222	ENST00000490839	CLDN20	P56880	219 aa		13.7	□□□□□ -0.22
AGAP3-222	ENST00000490839	RPS4X	P62701	263 aa	Known RBP	13.7	□□□□□ -0.22
AGAP3-222	ENST00000490839	MRPS25	P82663	173 aa	Known RBP	13.7	□□□□□ -0.22
AGAP3-222	ENST00000490839	CLEC12B	Q2HXU8	276 aa		13.7	□□□□□ -0.22
AGAP3-222	ENST00000490839	PHC2	Q8IXK0	858 aa		13.7	□□□□□ -0.22
AGAP3-222	ENST00000490839	CCDC116	Q8IYX3	515 aa		13.7	□□□□□ -0.22
AGAP3-222	ENST00000490839	SAMD14	Q8IZD0	417 aa	Predicted RBP	13.7	□□□□□ -0.22
AGAP3-222	ENST00000490839	OR4F6	Q8NGB9	312 aa		13.7	□□□□□ -0.22
AGAP3-222	ENST00000490839	OR9A2	Q8NGT5	310 aa		13.7	□□□□□ -0.22
AGAP3-222	ENST00000490839	OR6K3	Q8NGY3	331 aa		13.7	□□□□□ -0.22
AGAP3-222	ENST00000490839	KAT2A	Q92830	837 aa		13.7	□□□□□ -0.22
AGAP3-222	ENST00000490839	PHF21B	Q96EK2	531 aa		13.7	□□□□□ -0.22
AGAP3-222	ENST00000490839	PLPPR2	Q96GM1	343 aa		13.7	□□□□□ -0.22
AGAP3-222	ENST00000490839	NSUN5	Q96P11	429 aa	Known RBP	13.7	□□□□□ -0.22
AGAP3-222	ENST00000490839	PTGES2	Q9H7Z7	377 aa		13.7	□□□□□ -0.22
AGAP3-222	ENST00000490839	ANKRA2	Q9H9E1	313 aa		13.7	□□□□□ -0.22
AGAP3-222	ENST00000490839	FANCF	Q9NPI8	374 aa		13.7	□□□□□ -0.22
AGAP3-222	ENST00000490839	SDHAF3	Q9NRP4	125 aa		13.7	□□□□□ -0.22
AGAP3-222	ENST00000490839	PLSCR4	Q9NRQ2	329 aa		13.7	□□□□□ -0.22
AGAP3-222	ENST00000490839	FARSB	Q9NSD9	589 aa	Known RBP	13.7	□□□□□ -0.22
AGAP3-222	ENST00000490839	TMCO1	Q9UM00	188 aa		13.7	□□□□□ -0.22
AGAP3-222	ENST00000490839	ABCG2	Q9UNQ0	655 aa		13.7	□□□□□ -0.22
AGAP3-222	ENST00000490839	OR10H1	Q9Y4A9	318 aa		13.7	□□□□□ -0.22
AGAP3-222	ENST00000490839	HMX2	A2RU54	273 aa		13.69	□□□□□ -0.22
AGAP3-222	ENST00000490839	RNF223	E7ERA6	249 aa		13.69	□□□□□ -0.22
AGAP3-222	ENST00000490839	TLX2	O43763	284 aa	Predicted RBP	13.69	□□□□□ -0.22
AGAP3-222	ENST00000490839	AQP8	O94778	261 aa		13.69	□□□□□ -0.22
AGAP3-222	ENST00000490839	ESRRB	O95718	433 aa		13.69	□□□□□ -0.22
AGAP3-222	ENST00000490839	PLAU	P00749	431 aa		13.69	□□□□□ -0.22
AGAP3-222	ENST00000490839	PDYN	P01213	254 aa		13.69	□□□□□ -0.22
AGAP3-222	ENST00000490839	TP53	P04637	393 aa	Predicted RBP	13.69	□□□□□ -0.22
AGAP3-222	ENST00000490839	STAC2	Q6ZMT1	411 aa		13.69	□□□□□ -0.22
AGAP3-222	ENST00000490839	SLC44A2	Q8IWA5	706 aa	Predicted RBP	13.69	□□□□□ -0.22
AGAP3-222	ENST00000490839	C1orf52	Q8N6N3	182 aa	Known RBP	13.69	□□□□□ -0.22
AGAP3-222	ENST00000490839	SELENOM	Q8WWX9	145 aa		13.69	□□□□□ -0.22
AGAP3-222	ENST00000490839	OR10A4	Q9H209	315 aa		13.69	□□□□□ -0.22
AGAP3-222	ENST00000490839	MED11	Q9P086	117 aa		13.69	□□□□□ -0.22
AGAP3-222	ENST00000490839	RNF14	Q9UBS8	474 aa		13.69	□□□□□ -0.22
AGAP3-222	ENST00000490839	SNX6	Q9UNH7	406 aa		13.69	□□□□□ -0.22
AGAP3-222	ENST00000490839	LAMP3	Q9UQV4	416 aa		13.69	□□□□□ -0.22
AGAP3-222	ENST00000490839	AP4B1	Q9Y6B7	739 aa		13.69	□□□□□ -0.22
AGAP3-222	ENST00000490839	FADS1	O60427	444 aa		13.68	□□□□□ -0.22
AGAP3-222	ENST00000490839	PLOD3	O60568	738 aa		13.68	□□□□□ -0.22
AGAP3-222	ENST00000490839	NME6	O75414	186 aa	Predicted RBP	13.68	□□□□□ -0.22
AGAP3-222	ENST00000490839	OTC	P00480	354 aa		13.68	□□□□□ -0.22
AGAP3-222	ENST00000490839	PLG	P00747	810 aa	Predicted RBP	13.68	□□□□□ -0.22
AGAP3-222	ENST00000490839	TYK2	P29597	1187 aa		13.68	□□□□□ -0.22
AGAP3-222	ENST00000490839	MAGEA4	P43358	317 aa		13.68	□□□□□ -0.22
AGAP3-222	ENST00000490839	CTBP2	P56545	445 aa		13.68	□□□□□ -0.22
AGAP3-222	ENST00000490839	ZNF155	Q12901	538 aa	Predicted RBP	13.68	□□□□□ -0.22
AGAP3-222	ENST00000490839	STX5	Q13190	355 aa		13.68	□□□□□ -0.22
AGAP3-222	ENST00000490839	SGCB	Q16585	318 aa		13.68	□□□□□ -0.22
AGAP3-222	ENST00000490839	GLYR1	Q49A26	553 aa	Predicted RBP	13.68	□□□□□ -0.22
AGAP3-222	ENST00000490839	CCDC25	Q86WR0	208 aa		13.68	□□□□□ -0.22
AGAP3-222	ENST00000490839	WFDC8	Q8IUA0	241 aa		13.68	□□□□□ -0.22
AGAP3-222	ENST00000490839	MAPK1IP1L	Q8NDC0	245 aa		13.68	□□□□□ -0.22
AGAP3-222	ENST00000490839	OR4N2	Q8NGD1	307 aa		13.68	□□□□□ -0.22
AGAP3-222	ENST00000490839	OR5M1	Q8NGP8	315 aa		13.68	□□□□□ -0.22
AGAP3-222	ENST00000490839	UHMK1	Q8TAS1	419 aa	Known RBP	13.68	□□□□□ -0.22
AGAP3-222	ENST00000490839	TMEM158	Q8WZ71	300 aa		13.68	□□□□□ -0.22
AGAP3-222	ENST00000490839	AKAP1	Q92667	903 aa	Known RBP eCLIP	13.68	□□□□□ -0.22
AGAP3-222	ENST00000490839	MTBP	Q96DY7	904 aa		13.68	□□□□□ -0.22
AGAP3-222	ENST00000490839	C1GALT1C1	Q96EU7	318 aa		13.68	□□□□□ -0.22
AGAP3-222	ENST00000490839	TRMT61A	Q96FX7	289 aa	Known RBP	13.68	□□□□□ -0.22
AGAP3-222	ENST00000490839	GMPPA	Q96IJ6	420 aa	Predicted RBP	13.68	□□□□□ -0.22
AGAP3-222	ENST00000490839	NAPG	Q99747	312 aa	Predicted RBP	13.68	□□□□□ -0.22
AGAP3-222	ENST00000490839	REG4	Q9BYZ8	158 aa		13.68	□□□□□ -0.22
AGAP3-222	ENST00000490839	ACTR6	Q9GZN1	396 aa		13.68	□□□□□ -0.22
AGAP3-222	ENST00000490839	GIMAP4	Q9NUV9	329 aa		13.68	□□□□□ -0.22
AGAP3-222	ENST00000490839	FAM120C	Q9NX05	1096 aa	Known RBP	13.68	□□□□□ -0.22
AGAP3-222	ENST00000490839	TAS2R9	Q9NYW1	312 aa		13.68	□□□□□ -0.22
AGAP3-222	ENST00000490839	SENP1	Q9P0U3	644 aa		13.68	□□□□□ -0.22
AGAP3-222	ENST00000490839	MCM8	Q9UJA3	840 aa		13.68	□□□□□ -0.22
AGAP3-222	ENST00000490839	PCNX3	Q9H6A9	2034 aa		13.68	□□□□□ -0.22
AGAP3-222	ENST00000490839	OVOL3	O00110	214 aa		13.67	□□□□□ -0.22
AGAP3-222	ENST00000490839	CD5L	O43866	347 aa		13.67	□□□□□ -0.22
AGAP3-222	ENST00000490839	SS18L1	O75177	396 aa	Predicted RBP	13.67	□□□□□ -0.22
AGAP3-222	ENST00000490839	COQ9	O75208	318 aa		13.67	□□□□□ -0.22
AGAP3-222	ENST00000490839	SMIM24	O75264	130 aa		13.67	□□□□□ -0.22
AGAP3-222	ENST00000490839	IL3	P08700	152 aa		13.67	□□□□□ -0.22
AGAP3-222	ENST00000490839	RPS17	P08708	135 aa	Known RBP	13.67	□□□□□ -0.22
AGAP3-222	ENST00000490839	RBP1	P09455	135 aa		13.67	□□□□□ -0.22
AGAP3-222	ENST00000490839	IL11	P20809	199 aa		13.67	□□□□□ -0.22
AGAP3-222	ENST00000490839	IDUA	P35475	653 aa		13.67	□□□□□ -0.22
AGAP3-222	ENST00000490839	PSG6	Q00889	435 aa		13.67	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 34 ms