RNA–Protein interactions for RNA: ENST00000490561.6

SNX12-205, Transcript of sorting nexin 12, humanhuman

TSL 1 (best)

Gene SNX12, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-205ENST00000490561 PNLIPRP2P54317 469 aa12.23□□□□□ -0.45
SNX12-205ENST00000490561 POLE2P56282 527 aa12.23□□□□□ -0.45
SNX12-205ENST00000490561 PCBP3P57721 371 aaKnown RBP12.23□□□□□ -0.45
SNX12-205ENST00000490561 TMPRSS3P57727 454 aa12.23□□□□□ -0.45
SNX12-205ENST00000490561 KCNJ2P63252 427 aa12.23□□□□□ -0.45
SNX12-205ENST00000490561 Q0VFX4 171 aa12.23□□□□□ -0.45
SNX12-205ENST00000490561 SRSF6Q13247 344 aaKnown RBP12.23□□□□□ -0.45
SNX12-205ENST00000490561 SYPL1Q16563 259 aa12.23□□□□□ -0.45
SNX12-205ENST00000490561 ZSWIM7Q19AV6 140 aa12.23□□□□□ -0.45
SNX12-205ENST00000490561 CRB2Q5IJ48 1285 aa12.23□□□□□ -0.45
SNX12-205ENST00000490561 GLYATQ6IB77 296 aa12.23□□□□□ -0.45
SNX12-205ENST00000490561 LCN8Q6JVE9 175 aa12.23□□□□□ -0.45
SNX12-205ENST00000490561 TCTN3Q6NUS6 607 aa12.23□□□□□ -0.45
SNX12-205ENST00000490561 DHFR2Q86XF0 187 aa12.23□□□□□ -0.45
SNX12-205ENST00000490561 APLFQ8IW19 511 aaPredicted RBP12.23□□□□□ -0.45
SNX12-205ENST00000490561 EID3Q8N140 333 aa12.23□□□□□ -0.45
SNX12-205ENST00000490561 ZNF619Q8N2I2 560 aa12.23□□□□□ -0.45
SNX12-205ENST00000490561 GALNT16Q8N428 558 aa12.23□□□□□ -0.45
SNX12-205ENST00000490561 ANKFN1Q8N957 763 aa12.23□□□□□ -0.45
SNX12-205ENST00000490561 BHLHE22Q8NFJ8 381 aaPredicted RBP12.23□□□□□ -0.45
SNX12-205ENST00000490561 SPPL2AQ8TCT8 520 aa12.23□□□□□ -0.45
SNX12-205ENST00000490561 BRIX1Q8TDN6 353 aaKnown RBP12.23□□□□□ -0.45
SNX12-205ENST00000490561 FIG4Q92562 907 aa12.23□□□□□ -0.45
SNX12-205ENST00000490561 DIO2Q92813 273 aa12.23□□□□□ -0.45
SNX12-205ENST00000490561 FAM162AQ96A26 154 aa12.23□□□□□ -0.45
SNX12-205ENST00000490561 CCDC124Q96CT7 223 aaKnown RBP12.23□□□□□ -0.45
SNX12-205ENST00000490561 OTUB1Q96FW1 271 aaPredicted RBP12.23□□□□□ -0.45
SNX12-205ENST00000490561 LRGUKQ96M69 825 aa12.23□□□□□ -0.45
SNX12-205ENST00000490561 NSMCE2Q96MF7 247 aa12.23□□□□□ -0.45
SNX12-205ENST00000490561 TREX2Q9BQ50 279 aaPredicted RBP12.23□□□□□ -0.45
SNX12-205ENST00000490561 SAP130Q9H0E3 1048 aa12.23□□□□□ -0.45
SNX12-205ENST00000490561 SLC7A8Q9UHI5 535 aa12.23□□□□□ -0.45
SNX12-205ENST00000490561 RPS6KA6Q9UK32 745 aa12.23□□□□□ -0.45
SNX12-205ENST00000490561 PACSIN3Q9UKS6 424 aa12.23□□□□□ -0.45
SNX12-205ENST00000490561 POMPQ9Y244 141 aa12.23□□□□□ -0.45
SNX12-205ENST00000490561 WDR45Q9Y484 360 aa12.23□□□□□ -0.45
SNX12-205ENST00000490561 PCDHGA10Q9Y5H3 936 aa12.23□□□□□ -0.45
SNX12-205ENST00000490561 NPFFR2Q9Y5X5 522 aa12.23□□□□□ -0.45
SNX12-205ENST00000490561 KCNE3Q9Y6H6 103 aa12.23□□□□□ -0.45
SNX12-205ENST00000490561 NUP214P35658 2090 aaPredicted RBP12.23□□□□□ -0.45
SNX12-205ENST00000490561 DSPPQ9NZW4 1301 aa12.22□□□□□ -0.45
SNX12-205ENST00000490561 OR6C70A6NIJ9 312 aa12.22□□□□□ -0.45
SNX12-205ENST00000490561 TMEM200CA6NKL6 621 aa12.22□□□□□ -0.45
SNX12-205ENST00000490561 A8MUI8 341 aa12.22□□□□□ -0.45
SNX12-205ENST00000490561 WWP2O00308 870 aa12.22□□□□□ -0.45
SNX12-205ENST00000490561 ARPC2O15144 300 aa12.22□□□□□ -0.45
SNX12-205ENST00000490561 KIAA0513O60268 411 aa12.22□□□□□ -0.45
SNX12-205ENST00000490561 NME6O75414 186 aaPredicted RBP12.22□□□□□ -0.45
SNX12-205ENST00000490561 ITGA10O75578 1167 aa12.22□□□□□ -0.45
SNX12-205ENST00000490561 REM1O75628 298 aa12.22□□□□□ -0.45
SNX12-205ENST00000490561 PPM1BO75688 479 aa12.22□□□□□ -0.45
SNX12-205ENST00000490561 PGM3O95394 542 aa12.22□□□□□ -0.45
SNX12-205ENST00000490561 NADKO95544 446 aaPredicted RBP12.22□□□□□ -0.45
SNX12-205ENST00000490561 CHRM4P08173 479 aa12.22□□□□□ -0.45
SNX12-205ENST00000490561 CELA2AP08217 269 aa12.22□□□□□ -0.45
SNX12-205ENST00000490561 ENDOUP21128 410 aaKnown RBP12.22□□□□□ -0.45
SNX12-205ENST00000490561 ABCD3P28288 659 aa12.22□□□□□ -0.45
SNX12-205ENST00000490561 TLE3Q04726 772 aa12.22□□□□□ -0.45
SNX12-205ENST00000490561 FUT5Q11128 374 aa12.22□□□□□ -0.45
SNX12-205ENST00000490561 FLOT2Q14254 428 aa12.22□□□□□ -0.45
SNX12-205ENST00000490561 NNATQ16517 81 aa12.22□□□□□ -0.45
SNX12-205ENST00000490561 FLYWCH1Q4VC44 716 aa12.22□□□□□ -0.45
SNX12-205ENST00000490561 ATP1A1-AS1Q5TC04 95 aa12.22□□□□□ -0.45
SNX12-205ENST00000490561 ABHD17BQ5VST6 288 aa12.22□□□□□ -0.45
SNX12-205ENST00000490561 C1orf146Q5VVC0 180 aa12.22□□□□□ -0.45
SNX12-205ENST00000490561 NUP54Q7Z3B4 507 aa12.22□□□□□ -0.45
SNX12-205ENST00000490561 PEX5LQ8IYB4 626 aa12.22□□□□□ -0.45
SNX12-205ENST00000490561 ZNF527Q8NB42 609 aa12.22□□□□□ -0.45
SNX12-205ENST00000490561 GOLM1Q8NBJ4 401 aa12.22□□□□□ -0.45
SNX12-205ENST00000490561 FAM156AQ8NDB6 213 aa12.22□□□□□ -0.45
SNX12-205ENST00000490561 THAP3Q8WTV1 239 aaPredicted RBP12.22□□□□□ -0.45
SNX12-205ENST00000490561 TTC9Q92623 222 aa12.22□□□□□ -0.45
SNX12-205ENST00000490561 TMBIM1Q969X1 311 aa12.22□□□□□ -0.45
SNX12-205ENST00000490561 TMCO6Q96DC7 493 aa12.22□□□□□ -0.45
SNX12-205ENST00000490561 OMA1Q96E52 524 aa12.22□□□□□ -0.45
SNX12-205ENST00000490561 COL21A1Q96P44 957 aa12.22□□□□□ -0.45
SNX12-205ENST00000490561 DCBLD2Q96PD2 775 aa12.22□□□□□ -0.45
SNX12-205ENST00000490561 RASL10BQ96S79 203 aa12.22□□□□□ -0.45
SNX12-205ENST00000490561 ING2Q9H160 280 aa12.22□□□□□ -0.45
SNX12-205ENST00000490561 SLC38A1Q9H2H9 487 aa12.22□□□□□ -0.45
SNX12-205ENST00000490561 CDCP1Q9H5V8 836 aa12.22□□□□□ -0.45
SNX12-205ENST00000490561 ARMC7Q9H6L4 198 aa12.22□□□□□ -0.45
SNX12-205ENST00000490561 EVA1AQ9H8M9 152 aa12.22□□□□□ -0.45
SNX12-205ENST00000490561 EGFL7Q9UHF1 273 aa12.22□□□□□ -0.45
SNX12-205ENST00000490561 IFT52Q9Y366 437 aa12.22□□□□□ -0.45
SNX12-205ENST00000490561 WDFY3Q8IZQ1 3526 aa12.21□□□□□ -0.45
SNX12-205ENST00000490561 MED19A0JLT2 244 aaPredicted RBP12.21□□□□□ -0.45
SNX12-205ENST00000490561 PRAMEF27A3QJZ7 478 aa12.21□□□□□ -0.45
SNX12-205ENST00000490561 AQP12BA6NM10 295 aa12.21□□□□□ -0.45
SNX12-205ENST00000490561 TP53I11O14683 189 aa12.21□□□□□ -0.45
SNX12-205ENST00000490561 TSPAN2O60636 221 aa12.21□□□□□ -0.45
SNX12-205ENST00000490561 OR2J2O76002 312 aa12.21□□□□□ -0.45
SNX12-205ENST00000490561 ALPPP05187 535 aa12.21□□□□□ -0.45
SNX12-205ENST00000490561 DBIP07108 87 aaKnown RBP12.21□□□□□ -0.45
SNX12-205ENST00000490561 NGFRP08138 427 aa12.21□□□□□ -0.45
SNX12-205ENST00000490561 FBXO45P0C2W1 286 aa12.21□□□□□ -0.45
SNX12-205ENST00000490561 KDELR2P33947 212 aa12.21□□□□□ -0.45
SNX12-205ENST00000490561 SOX11P35716 441 aa12.21□□□□□ -0.45
SNX12-205ENST00000490561 CASRP41180 1078 aa12.21□□□□□ -0.45
SNX12-205ENST00000490561 CLK3P49761 638 aaKnown RBP12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms