RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 TFAP2EQ6VUC0 442 aa12.11□□□□□ -0.47
EXOSC3-207ENST00000490516 B3GLCTQ6Y288 498 aa12.11□□□□□ -0.47
EXOSC3-207ENST00000490516 NUFIP2Q7Z417 695 aaKnown RBP12.11□□□□□ -0.47
EXOSC3-207ENST00000490516 PEG10Q86TG7 708 aaKnown RBP12.11□□□□□ -0.47
EXOSC3-207ENST00000490516 OR10D3Q8NH80 312 aa12.11□□□□□ -0.47
EXOSC3-207ENST00000490516 FAM45AQ8TCE6 357 aa12.11□□□□□ -0.47
EXOSC3-207ENST00000490516 RNF138Q8WVD3 245 aa12.11□□□□□ -0.47
EXOSC3-207ENST00000490516 ANKRD49Q8WVL7 239 aa12.11□□□□□ -0.47
EXOSC3-207ENST00000490516 SLC35A4Q96G79 324 aa12.11□□□□□ -0.47
EXOSC3-207ENST00000490516 GBP4Q96PP9 640 aa12.11□□□□□ -0.47
EXOSC3-207ENST00000490516 BTBD9Q96Q07 612 aa12.11□□□□□ -0.47
EXOSC3-207ENST00000490516 XAB2Q9HCS7 855 aaKnown RBP12.11□□□□□ -0.47
EXOSC3-207ENST00000490516 SMYD2Q9NRG4 433 aa12.11□□□□□ -0.47
EXOSC3-207ENST00000490516 POU2F3Q9UKI9 436 aa12.11□□□□□ -0.47
EXOSC3-207ENST00000490516 CFL2Q9Y281 166 aa12.11□□□□□ -0.47
EXOSC3-207ENST00000490516 AP4B1Q9Y6B7 739 aa12.11□□□□□ -0.47
EXOSC3-207ENST00000490516 EPN1Q9Y6I3 576 aaPredicted RBP12.11□□□□□ -0.47
EXOSC3-207ENST00000490516 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.1□□□□□ -0.47
EXOSC3-207ENST00000490516 NDUFS8O00217 210 aa12.1□□□□□ -0.47
EXOSC3-207ENST00000490516 TO15178 435 aa12.1□□□□□ -0.47
EXOSC3-207ENST00000490516 SMAD9O15198 467 aaKnown RBP12.1□□□□□ -0.47
EXOSC3-207ENST00000490516 CXCL13O43927 109 aa12.1□□□□□ -0.47
EXOSC3-207ENST00000490516 TSPAN2O60636 221 aa12.1□□□□□ -0.47
EXOSC3-207ENST00000490516 STK16O75716 305 aa12.1□□□□□ -0.47
EXOSC3-207ENST00000490516 CBX7O95931 251 aa12.1□□□□□ -0.47
EXOSC3-207ENST00000490516 OPN1LWP04000 364 aa12.1□□□□□ -0.47
EXOSC3-207ENST00000490516 GBAP04062 536 aa12.1□□□□□ -0.47
EXOSC3-207ENST00000490516 IL2RGP31785 369 aa12.1□□□□□ -0.47
EXOSC3-207ENST00000490516 BSGP35613 385 aa12.1□□□□□ -0.47
EXOSC3-207ENST00000490516 GGT5P36269 586 aa12.1□□□□□ -0.47
EXOSC3-207ENST00000490516 MAGEA3P43357 314 aa12.1□□□□□ -0.47
EXOSC3-207ENST00000490516 PPICP45877 212 aa12.1□□□□□ -0.47
EXOSC3-207ENST00000490516 PPA1Q15181 289 aa12.1□□□□□ -0.47
EXOSC3-207ENST00000490516 TGFBIQ15582 683 aa12.1□□□□□ -0.47
EXOSC3-207ENST00000490516 TBCCQ15814 346 aa12.1□□□□□ -0.47
EXOSC3-207ENST00000490516 PRICKLE4Q2TBC4 344 aa12.1□□□□□ -0.47
EXOSC3-207ENST00000490516 Q6ZSR9 355 aa12.1□□□□□ -0.47
EXOSC3-207ENST00000490516 BHLHA15Q7RTS1 189 aaPredicted RBP12.1□□□□□ -0.47
EXOSC3-207ENST00000490516 GALNT10Q86SR1 603 aa12.1□□□□□ -0.47
EXOSC3-207ENST00000490516 ADAMTSL2Q86TH1 951 aa12.1□□□□□ -0.47
EXOSC3-207ENST00000490516 CNTN4Q8IWV2 1026 aa12.1□□□□□ -0.47
EXOSC3-207ENST00000490516 OR4K14Q8NGD5 310 aa12.1□□□□□ -0.47
EXOSC3-207ENST00000490516 OR52R1Q8NGF1 315 aa12.1□□□□□ -0.47
EXOSC3-207ENST00000490516 KCTD4Q8WVF5 259 aa12.1□□□□□ -0.47
EXOSC3-207ENST00000490516 ZNF747Q9BV97 191 aa12.1□□□□□ -0.47
EXOSC3-207ENST00000490516 DDX47Q9H0S4 455 aaKnown RBP12.1□□□□□ -0.47
EXOSC3-207ENST00000490516 CNOT10Q9H9A5 744 aaKnown RBP12.1□□□□□ -0.47
EXOSC3-207ENST00000490516 GLRX2Q9NS18 164 aa12.1□□□□□ -0.47
EXOSC3-207ENST00000490516 MAT2BQ9NZL9 334 aa12.1□□□□□ -0.47
EXOSC3-207ENST00000490516 MCTS1Q9ULC4 181 aaKnown RBP12.1□□□□□ -0.47
EXOSC3-207ENST00000490516 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.1□□□□□ -0.47
EXOSC3-207ENST00000490516 GOLGA6L22H0YM25 854 aa12.09□□□□□ -0.47
EXOSC3-207ENST00000490516 CCNT2O60583 730 aaKnown RBP12.09□□□□□ -0.47
EXOSC3-207ENST00000490516 NME6O75414 186 aaPredicted RBP12.09□□□□□ -0.47
EXOSC3-207ENST00000490516 SYNGR4O95473 234 aa12.09□□□□□ -0.47
EXOSC3-207ENST00000490516 PORP16435 677 aaPredicted RBP12.09□□□□□ -0.47
EXOSC3-207ENST00000490516 EMDP50402 254 aa12.09□□□□□ -0.47
EXOSC3-207ENST00000490516 STX5Q13190 355 aa12.09□□□□□ -0.47
EXOSC3-207ENST00000490516 ITGADQ13349 1161 aa12.09□□□□□ -0.47
EXOSC3-207ENST00000490516 E2F2Q14209 437 aa12.09□□□□□ -0.47
EXOSC3-207ENST00000490516 GANABQ14697 944 aaKnown RBP12.09□□□□□ -0.47
EXOSC3-207ENST00000490516 LGSNQ5TDP6 509 aa12.09□□□□□ -0.47
EXOSC3-207ENST00000490516 SLC22A25Q6T423 547 aa12.09□□□□□ -0.47
EXOSC3-207ENST00000490516 SHISA2Q6UWI4 295 aa12.09□□□□□ -0.47
EXOSC3-207ENST00000490516 LARP4Q71RC2 724 aaKnown RBP eCLIP12.09□□□□□ -0.47
EXOSC3-207ENST00000490516 NKAPQ8N5F7 415 aaKnown RBP12.09□□□□□ -0.47
EXOSC3-207ENST00000490516 CEP112Q8N8E3 955 aa12.09□□□□□ -0.47
EXOSC3-207ENST00000490516 MCUQ8NE86 351 aa12.09□□□□□ -0.47
EXOSC3-207ENST00000490516 OR2W6PQ8NHA6 318 aa12.09□□□□□ -0.47
EXOSC3-207ENST00000490516 HUS1BQ8NHY5 278 aa12.09□□□□□ -0.47
EXOSC3-207ENST00000490516 UBE2E3Q969T4 207 aa12.09□□□□□ -0.47
EXOSC3-207ENST00000490516 MTERF1Q99551 399 aaKnown RBP12.09□□□□□ -0.47
EXOSC3-207ENST00000490516 CENPKQ9BS16 269 aa12.09□□□□□ -0.47
EXOSC3-207ENST00000490516 RTN4RQ9BZR6 473 aa12.09□□□□□ -0.47
EXOSC3-207ENST00000490516 BPESC1Q9GZL8 116 aa12.09□□□□□ -0.47
EXOSC3-207ENST00000490516 DDX31Q9H8H2 851 aaKnown RBP12.09□□□□□ -0.47
EXOSC3-207ENST00000490516 ZNF639Q9UID6 485 aa12.09□□□□□ -0.47
EXOSC3-207ENST00000490516 GPR55Q9Y2T6 319 aaPredicted RBP12.09□□□□□ -0.47
EXOSC3-207ENST00000490516 GOLGA8QA0A0J9YX86 632 aa12.08□□□□□ -0.48
EXOSC3-207ENST00000490516 GOLGA8OA6NCC3 632 aa12.08□□□□□ -0.48
EXOSC3-207ENST00000490516 GOLGA8NF8WBI6 632 aa12.08□□□□□ -0.48
EXOSC3-207ENST00000490516 TRIM77I1YAP6 450 aa12.08□□□□□ -0.48
EXOSC3-207ENST00000490516 GOLGA8RI6L899 631 aa12.08□□□□□ -0.48
EXOSC3-207ENST00000490516 LYZL6O75951 148 aa12.08□□□□□ -0.48
EXOSC3-207ENST00000490516 IL12BP29460 328 aa12.08□□□□□ -0.48
EXOSC3-207ENST00000490516 SERPINB1P30740 379 aa12.08□□□□□ -0.48
EXOSC3-207ENST00000490516 CORO7P57737 925 aa12.08□□□□□ -0.48
EXOSC3-207ENST00000490516 MAP4K2Q12851 820 aa12.08□□□□□ -0.48
EXOSC3-207ENST00000490516 EFR3AQ14156 821 aa12.08□□□□□ -0.48
EXOSC3-207ENST00000490516 TRMT12Q53H54 448 aaKnown RBP12.08□□□□□ -0.48
EXOSC3-207ENST00000490516 TEDDM1Q5T9Z0 273 aa12.08□□□□□ -0.48
EXOSC3-207ENST00000490516 GALNT7Q86SF2 657 aa12.08□□□□□ -0.48
EXOSC3-207ENST00000490516 EXOC3L1Q86VI1 746 aa12.08□□□□□ -0.48
EXOSC3-207ENST00000490516 TCAIMQ8N3R3 496 aa12.08□□□□□ -0.48
EXOSC3-207ENST00000490516 ZNF418Q8TF45 676 aaPredicted RBP12.08□□□□□ -0.48
EXOSC3-207ENST00000490516 EFHD2Q96C19 240 aaPredicted RBP12.08□□□□□ -0.48
EXOSC3-207ENST00000490516 C1GALT1C1Q96EU7 318 aa12.08□□□□□ -0.48
EXOSC3-207ENST00000490516 RADILQ96JH8 1075 aa12.08□□□□□ -0.48
EXOSC3-207ENST00000490516 ADGRG7Q96K78 797 aa12.08□□□□□ -0.48
EXOSC3-207ENST00000490516 CAPN6Q9Y6Q1 641 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms