RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 SERPINI2O75830 405 aa2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 EML2O95834 649 aa2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 RAF1P04049 648 aa2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 IVLP07476 585 aa2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 ALPIP09923 528 aa2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 UBTFL6P0CB48 400 aaPredicted RBP2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 ETS2P15036 469 aa2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 MYOD1P15172 320 aa2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 HPGDP15428 266 aa2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 CD58P19256 250 aa2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 CYP2B6P20813 491 aa2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 PRKACBP22694 351 aa2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 ITGA3P26006 1051 aa2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 U2AF2P26368 475 aaKnown RBP eCLIP2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 C21orf33P30042 268 aaPredicted RBP2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 SSTR2P30874 369 aa2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 PRKAR2BP31323 418 aa2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 STX2P32856 288 aa2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 LONP1P36776 959 aaKnown RBP2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 EPS15P42566 896 aa2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 CASP4P49662 377 aa2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 BCAP31P51572 246 aa2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 NDST1P52848 882 aa2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 MAZP56270 477 aaKnown RBP2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 RPS15P62841 145 aaKnown RBP2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 CX3CL1P78423 397 aa2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 SLAQ13239 276 aa2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 PPIL2Q13356 520 aa2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 MAB21L1Q13394 359 aa2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 ITPK1Q13572 414 aa2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 CUL1Q13616 776 aa2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 TGFBIQ15582 683 aa2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 CHI3L2Q15782 390 aa2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 SYPL1Q16563 259 aa2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 CDKN3Q16667 212 aa2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 KRTAP24-1Q3LI83 254 aa2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 POM121L1PQ3SYA9 428 aa2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 ZNF672Q499Z4 452 aaPredicted RBP2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 SLC25A53Q5H9E4 307 aa2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 OR2A2Q6IF42 318 aa2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 CDC42EP5Q6NZY7 148 aa2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 TMEM64Q6YI46 380 aa2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 ANO5Q75V66 913 aa2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 BZW1Q7L1Q6 419 aaKnown RBP2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 RNF130Q86XS8 419 aa2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 RYBPQ8N488 228 aaPredicted RBP2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 OR1L4Q8NGR5 311 aa2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 GPR148Q8TDV2 347 aa2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 SCFD1Q8WVM8 642 aa2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 PIBF1Q8WXW3 757 aa2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 NRGNQ92686 78 aa2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 SLC25A36Q96CQ1 311 aa2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 HPDLQ96IR7 371 aa2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 TXNDC15Q96J42 360 aa2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 VSTM2LQ96N03 204 aa2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 NEDD4LQ96PU5 975 aa2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 CHP1Q99653 195 aa2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 MAP3K3Q99759 626 aa2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 LZTS2Q9BRK4 669 aa2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 WRAP53Q9BUR4 548 aaKnown RBP2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 ANKRD60Q9BZ19 345 aa2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 SHARPINQ9H0F6 387 aa2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 IKZF5Q9H5V7 419 aa2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 DHX33Q9H6R0 707 aaKnown RBP2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 C8orf33Q9H7E9 229 aaPredicted RBP2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 C10orf88Q9H8K7 445 aa2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 COG4Q9H9E3 785 aa2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 UBTD1Q9HAC8 227 aa2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 ZNF160Q9HCG1 818 aa2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 MTCH1Q9NZJ7 389 aa2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 DBF4Q9UBU7 674 aaPredicted RBP2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 MRTO4Q9UKD2 239 aaKnown RBP2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 ADAM28Q9UKQ2 775 aa2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 AGO1Q9UL18 857 aaKnown RBP2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 NCKAP1Q9Y2A7 1128 aa2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 CSDC2Q9Y534 153 aaKnown RBP2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 RIPK3Q9Y572 518 aa2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 KIF16BQ96L93 1317 aa2.82□□□□□ -1.96
DEPDC1-204ENST00000489862 FAM240BA0A1B0GVZ2 78 aa2.81□□□□□ -1.96
DEPDC1-204ENST00000489862 HSBP1L1C9JCN9 74 aa2.81□□□□□ -1.96
DEPDC1-204ENST00000489862 WWP2O00308 870 aa2.81□□□□□ -1.96
DEPDC1-204ENST00000489862 BTN3A3O00478 584 aa2.81□□□□□ -1.96
DEPDC1-204ENST00000489862 IMPA2O14732 288 aa2.81□□□□□ -1.96
DEPDC1-204ENST00000489862 FPGTO14772 594 aa2.81□□□□□ -1.96
DEPDC1-204ENST00000489862 CLN5O75503 358 aa2.81□□□□□ -1.96
DEPDC1-204ENST00000489862 NDUFA7O95182 113 aa2.81□□□□□ -1.96
DEPDC1-204ENST00000489862 LDLRP01130 860 aa2.81□□□□□ -1.96
DEPDC1-204ENST00000489862 MT-ND2P03891 347 aa2.81□□□□□ -1.96
DEPDC1-204ENST00000489862 ANXA4P09525 319 aaPredicted RBP2.81□□□□□ -1.96
DEPDC1-204ENST00000489862 DARSP14868 501 aaKnown RBP2.81□□□□□ -1.96
DEPDC1-204ENST00000489862 MX1P20591 662 aa2.81□□□□□ -1.96
DEPDC1-204ENST00000489862 CD1BP29016 333 aa2.81□□□□□ -1.96
DEPDC1-204ENST00000489862 NAMPTP43490 491 aa2.81□□□□□ -1.96
DEPDC1-204ENST00000489862 GPR4P46093 362 aa2.81□□□□□ -1.96
DEPDC1-204ENST00000489862 GLIPR1P48060 266 aa2.81□□□□□ -1.96
DEPDC1-204ENST00000489862 CCT3P49368 545 aaKnown RBP2.81□□□□□ -1.96
DEPDC1-204ENST00000489862 SLC26A2P50443 739 aa2.81□□□□□ -1.96
DEPDC1-204ENST00000489862 NDST2P52849 883 aa2.81□□□□□ -1.96
DEPDC1-204ENST00000489862 PLTPP55058 493 aa2.81□□□□□ -1.96
DEPDC1-204ENST00000489862 DLX5P56178 289 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms