RNA–Protein interactions for RNA: ENST00000489772.5

GGA1-222, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, human

TSL 2

Gene GGA1, Length 1,384 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GGA1-222	ENST00000489772	HDAC3	O15379	428 aa		10.12	□□□□□ -0.79
GGA1-222	ENST00000489772	WDR1	O75083	606 aa		10.12	□□□□□ -0.79
GGA1-222	ENST00000489772	IL33	O95760	270 aa		10.12	□□□□□ -0.79
GGA1-222	ENST00000489772	CYP4B1	P13584	511 aa		10.12	□□□□□ -0.79
GGA1-222	ENST00000489772	ENDOU	P21128	410 aa	Known RBP	10.12	□□□□□ -0.79
GGA1-222	ENST00000489772	ACVR2A	P27037	513 aa		10.12	□□□□□ -0.79
GGA1-222	ENST00000489772	EVI2B	P34910	448 aa		10.12	□□□□□ -0.79
GGA1-222	ENST00000489772	RFX3	P48380	749 aa		10.12	□□□□□ -0.79
GGA1-222	ENST00000489772	PRIM2	P49643	509 aa		10.12	□□□□□ -0.79
GGA1-222	ENST00000489772	DIO3	P55073	304 aa		10.12	□□□□□ -0.79
GGA1-222	ENST00000489772	PGS1	Q32NB8	556 aa		10.12	□□□□□ -0.79
GGA1-222	ENST00000489772	EMC4	Q5J8M3	183 aa		10.12	□□□□□ -0.79
GGA1-222	ENST00000489772	MFSD12	Q6NUT3	480 aa		10.12	□□□□□ -0.79
GGA1-222	ENST00000489772	ACAD11	Q709F0	780 aa		10.12	□□□□□ -0.79
GGA1-222	ENST00000489772	CAMKMT	Q7Z624	323 aa		10.12	□□□□□ -0.79
GGA1-222	ENST00000489772	PLCZ1	Q86YW0	608 aa		10.12	□□□□□ -0.79
GGA1-222	ENST00000489772	WDSUB1	Q8N9V3	476 aa		10.12	□□□□□ -0.79
GGA1-222	ENST00000489772	PSMA8	Q8TAA3	256 aa		10.12	□□□□□ -0.79
GGA1-222	ENST00000489772	NUDT8	Q8WV74	236 aa		10.12	□□□□□ -0.79
GGA1-222	ENST00000489772	PIK3R3	Q92569	461 aa		10.12	□□□□□ -0.79
GGA1-222	ENST00000489772	SLC9A6	Q92581	669 aa		10.12	□□□□□ -0.79
GGA1-222	ENST00000489772	HOXB13	Q92826	284 aa	Predicted RBP	10.12	□□□□□ -0.79
GGA1-222	ENST00000489772	FAM120B	Q96EK7	910 aa	Known RBP	10.12	□□□□□ -0.79
GGA1-222	ENST00000489772	ATP6V1G3	Q96LB4	118 aa		10.12	□□□□□ -0.79
GGA1-222	ENST00000489772	DPY30	Q9C005	99 aa		10.12	□□□□□ -0.79
GGA1-222	ENST00000489772	NEUROD4	Q9HD90	331 aa		10.12	□□□□□ -0.79
GGA1-222	ENST00000489772	SERHL	Q9NQF3	203 aa		10.12	□□□□□ -0.79
GGA1-222	ENST00000489772	SDHAF3	Q9NRP4	125 aa		10.12	□□□□□ -0.79
GGA1-222	ENST00000489772	SIRT3	Q9NTG7	399 aa	Predicted RBP	10.12	□□□□□ -0.79
GGA1-222	ENST00000489772	ALKBH4	Q9NXW9	302 aa		10.12	□□□□□ -0.79
GGA1-222	ENST00000489772	COQ3	Q9NZJ6	369 aa		10.12	□□□□□ -0.79
GGA1-222	ENST00000489772	MARCO	Q9UEW3	520 aa	Predicted RBP	10.12	□□□□□ -0.79
GGA1-222	ENST00000489772	ABCG2	Q9UNQ0	655 aa		10.12	□□□□□ -0.79
GGA1-222	ENST00000489772	PCDHGB3	Q9Y5G1	929 aa		10.12	□□□□□ -0.79
GGA1-222	ENST00000489772	HRH3	Q9Y5N1	445 aa		10.12	□□□□□ -0.79
GGA1-222	ENST00000489772	ZGRF1	Q86YA3	2104 aa		10.11	□□□□□ -0.79
GGA1-222	ENST00000489772	GIMAP1-GIMAP5	A0A087WTJ2	511 aa		10.11	□□□□□ -0.79
GGA1-222	ENST00000489772	KLF11	O14901	512 aa		10.11	□□□□□ -0.79
GGA1-222	ENST00000489772	CFLAR	O15519	480 aa		10.11	□□□□□ -0.79
GGA1-222	ENST00000489772	NKX2-2	O95096	273 aa		10.11	□□□□□ -0.79
GGA1-222	ENST00000489772	C6orf47	O95873	294 aa		10.11	□□□□□ -0.79
GGA1-222	ENST00000489772	HOXD4	P09016	255 aa	Predicted RBP	10.11	□□□□□ -0.79
GGA1-222	ENST00000489772	ALOX5	P09917	674 aa		10.11	□□□□□ -0.79
GGA1-222	ENST00000489772	KIT	P10721	976 aa		10.11	□□□□□ -0.79
GGA1-222	ENST00000489772	GABRA1	P14867	456 aa		10.11	□□□□□ -0.79
GGA1-222	ENST00000489772	COL8A1	P27658	744 aa		10.11	□□□□□ -0.79
GGA1-222	ENST00000489772	PTGER4	P35408	488 aa		10.11	□□□□□ -0.79
GGA1-222	ENST00000489772	MAP3K8	P41279	467 aa		10.11	□□□□□ -0.79
GGA1-222	ENST00000489772	CCT3	P49368	545 aa	Known RBP	10.11	□□□□□ -0.79
GGA1-222	ENST00000489772	OCRL	Q01968	901 aa		10.11	□□□□□ -0.79
GGA1-222	ENST00000489772	PMPCA	Q10713	525 aa		10.11	□□□□□ -0.79
GGA1-222	ENST00000489772	EIPR1	Q53HC9	387 aa		10.11	□□□□□ -0.79
GGA1-222	ENST00000489772	NHSL2	Q5HYW2	709 aa		10.11	□□□□□ -0.79
GGA1-222	ENST00000489772	HIST2H2BC	Q6DN03	193 aa		10.11	□□□□□ -0.79
GGA1-222	ENST00000489772	OGFOD2	Q6N063	350 aa		10.11	□□□□□ -0.79
GGA1-222	ENST00000489772	BHLHB9	Q6PI77	547 aa		10.11	□□□□□ -0.79
GGA1-222	ENST00000489772	B3GNT6	Q6ZMB0	384 aa		10.11	□□□□□ -0.79
GGA1-222	ENST00000489772	NCCRP1	Q6ZVX7	275 aa	Predicted RBP	10.11	□□□□□ -0.79
GGA1-222	ENST00000489772	VPS37A	Q8NEZ2	397 aa		10.11	□□□□□ -0.79
GGA1-222	ENST00000489772	OR56A1	Q8NGH5	318 aa		10.11	□□□□□ -0.79
GGA1-222	ENST00000489772	OR14L1P	Q8NHC6	308 aa		10.11	□□□□□ -0.79
GGA1-222	ENST00000489772	FBXO30	Q8TB52	745 aa		10.11	□□□□□ -0.79
GGA1-222	ENST00000489772	RNF138	Q8WVD3	245 aa		10.11	□□□□□ -0.79
GGA1-222	ENST00000489772	JADE3	Q92613	823 aa		10.11	□□□□□ -0.79
GGA1-222	ENST00000489772	RND1	Q92730	232 aa		10.11	□□□□□ -0.79
GGA1-222	ENST00000489772	MOAP1	Q96BY2	351 aa		10.11	□□□□□ -0.79
GGA1-222	ENST00000489772	GIMAP5	Q96F15	307 aa		10.11	□□□□□ -0.79
GGA1-222	ENST00000489772	CHMP6	Q96FZ7	201 aa		10.11	□□□□□ -0.79
GGA1-222	ENST00000489772	RMND5B	Q96G75	393 aa	Predicted RBP	10.11	□□□□□ -0.79
GGA1-222	ENST00000489772	C16orf58	Q96GQ5	468 aa		10.11	□□□□□ -0.79
GGA1-222	ENST00000489772	VIPAS39	Q9H9C1	493 aa		10.11	□□□□□ -0.79
GGA1-222	ENST00000489772	FAM120C	Q9NX05	1096 aa	Known RBP	10.11	□□□□□ -0.79
GGA1-222	ENST00000489772	PPP4R1L	Q9P1A2	415 aa		10.11	□□□□□ -0.79
GGA1-222	ENST00000489772	FAF1	Q9UNN5	650 aa	Predicted RBP	10.11	□□□□□ -0.79
GGA1-222	ENST00000489772	CENPE	Q02224	2701 aa		10.1	□□□□□ -0.79
GGA1-222	ENST00000489772	GXYLT2	A0PJZ3	443 aa		10.1	□□□□□ -0.79
GGA1-222	ENST00000489772	FAM47E-STBD1	D6RA91	191 aa		10.1	□□□□□ -0.79
GGA1-222	ENST00000489772	SCO2	O43819	266 aa		10.1	□□□□□ -0.79
GGA1-222	ENST00000489772	SOX30	O94993	753 aa		10.1	□□□□□ -0.79
GGA1-222	ENST00000489772	UTS2	O95399	124 aa		10.1	□□□□□ -0.79
GGA1-222	ENST00000489772	CLDN14	O95500	239 aa		10.1	□□□□□ -0.79
GGA1-222	ENST00000489772	HMGN2	P05204	90 aa	Known RBP	10.1	□□□□□ -0.79
GGA1-222	ENST00000489772	KRT16	P08779	473 aa		10.1	□□□□□ -0.79
GGA1-222	ENST00000489772	ACP2	P11117	423 aa		10.1	□□□□□ -0.79
GGA1-222	ENST00000489772	H2AFX	P16104	143 aa	Predicted RBP	10.1	□□□□□ -0.79
GGA1-222	ENST00000489772	HTR1E	P28566	365 aa		10.1	□□□□□ -0.79
GGA1-222	ENST00000489772	EPHA3	P29320	983 aa		10.1	□□□□□ -0.79
GGA1-222	ENST00000489772	KIR3DL1	P43629	444 aa		10.1	□□□□□ -0.79
GGA1-222	ENST00000489772	CLNS1A	P54105	237 aa	Known RBP	10.1	□□□□□ -0.79
GGA1-222	ENST00000489772	GAS1	P54826	345 aa		10.1	□□□□□ -0.79
GGA1-222	ENST00000489772	TP53BP2	Q13625	1128 aa		10.1	□□□□□ -0.79
GGA1-222	ENST00000489772	LASP1	Q14847	261 aa	Known RBP	10.1	□□□□□ -0.79
GGA1-222	ENST00000489772	SF3B4	Q15427	424 aa	Known RBP eCLIP	10.1	□□□□□ -0.79	4e-14	■■■■■ 47.2
GGA1-222	ENST00000489772	DUSP5	Q16690	384 aa		10.1	□□□□□ -0.79
GGA1-222	ENST00000489772	ZNF630	Q2M218	657 aa	Predicted RBP	10.1	□□□□□ -0.79
GGA1-222	ENST00000489772	WIPI1	Q5MNZ9	446 aa	Predicted RBP	10.1	□□□□□ -0.79
GGA1-222	ENST00000489772	C1orf185	Q5T7R7	199 aa		10.1	□□□□□ -0.79
GGA1-222	ENST00000489772	ANXA8L1	Q5VT79	327 aa		10.1	□□□□□ -0.79
GGA1-222	ENST00000489772	OR5M10	Q6IEU7	315 aa		10.1	□□□□□ -0.79
GGA1-222	ENST00000489772	SPATA19	Q7Z5L4	167 aa		10.1	□□□□□ -0.79

Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms