RNA–Protein interactions for RNA: ENST00000489687.1

CNOT9-207, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 3

Gene CNOT9, Length 288 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-207ENST00000489687 ZFAND1Q8TCF1 268 aa5.42□□□□□ -1.54
CNOT9-207ENST00000489687 FAR1Q8WVX9 515 aa5.42□□□□□ -1.54
CNOT9-207ENST00000489687 PIK3R3Q92569 461 aa5.42□□□□□ -1.54
CNOT9-207ENST00000489687 RPL3LQ92901 407 aaKnown RBP5.42□□□□□ -1.54
CNOT9-207ENST00000489687 EXT2Q93063 718 aa5.42□□□□□ -1.54
CNOT9-207ENST00000489687 PTP4A1Q93096 173 aa5.42□□□□□ -1.54
CNOT9-207ENST00000489687 NEIL2Q969S2 332 aa5.42□□□□□ -1.54
CNOT9-207ENST00000489687 PPWD1Q96BP3 646 aaKnown RBP5.42□□□□□ -1.54
CNOT9-207ENST00000489687 FBXL8Q96CD0 374 aa5.42□□□□□ -1.54
CNOT9-207ENST00000489687 CLPTM1LQ96KA5 538 aa5.42□□□□□ -1.54
CNOT9-207ENST00000489687 MOGAT1Q96PD6 335 aa5.42□□□□□ -1.54
CNOT9-207ENST00000489687 SIGLEC12Q96PQ1 595 aa5.42□□□□□ -1.54
CNOT9-207ENST00000489687 BARD1Q99728 777 aaKnown RBP5.42□□□□□ -1.54
CNOT9-207ENST00000489687 GAL3ST1Q99999 423 aa5.42□□□□□ -1.54
CNOT9-207ENST00000489687 TMEM246Q9BRR3 403 aa5.42□□□□□ -1.54
CNOT9-207ENST00000489687 PELOQ9BRX2 385 aaKnown RBP5.42□□□□□ -1.54
CNOT9-207ENST00000489687 SGPP1Q9BX95 441 aa5.42□□□□□ -1.54
CNOT9-207ENST00000489687 BHLHE41Q9C0J9 482 aaPredicted RBP5.42□□□□□ -1.54
CNOT9-207ENST00000489687 ZNF700Q9H0M5 742 aa5.42□□□□□ -1.54
CNOT9-207ENST00000489687 PPA2Q9H2U2 334 aa5.42□□□□□ -1.54
CNOT9-207ENST00000489687 MMP27Q9H306 513 aa5.42□□□□□ -1.54
CNOT9-207ENST00000489687 CAB39LQ9H9S4 337 aa5.42□□□□□ -1.54
CNOT9-207ENST00000489687 EFCAB1Q9HAE3 211 aa5.42□□□□□ -1.54
CNOT9-207ENST00000489687 ENAMQ9NRM1 1142 aa5.42□□□□□ -1.54
CNOT9-207ENST00000489687 AGPAT4Q9NRZ5 378 aa5.42□□□□□ -1.54
CNOT9-207ENST00000489687 LANCL2Q9NS86 450 aa5.42□□□□□ -1.54
CNOT9-207ENST00000489687 MED9Q9NWA0 146 aa5.42□□□□□ -1.54
CNOT9-207ENST00000489687 TAS2R13Q9NYV9 303 aa5.42□□□□□ -1.54
CNOT9-207ENST00000489687 GPRC5BQ9NZH0 403 aa5.42□□□□□ -1.54
CNOT9-207ENST00000489687 PTTG3PQ9NZH4 202 aa5.42□□□□□ -1.54
CNOT9-207ENST00000489687 KLHL21Q9UJP4 597 aa5.42□□□□□ -1.54
CNOT9-207ENST00000489687 FOXD3Q9UJU5 478 aaPredicted RBP5.42□□□□□ -1.54
CNOT9-207ENST00000489687 USP22Q9UPT9 525 aa5.42□□□□□ -1.54
CNOT9-207ENST00000489687 TRAPPC4Q9Y296 219 aa5.42□□□□□ -1.54
CNOT9-207ENST00000489687 TMEM5Q9Y2B1 443 aa5.42□□□□□ -1.54
CNOT9-207ENST00000489687 PLLPQ9Y342 182 aa5.42□□□□□ -1.54
CNOT9-207ENST00000489687 RBMX2Q9Y388 322 aaKnown RBP5.42□□□□□ -1.54
CNOT9-207ENST00000489687 HIVEP1P15822 2718 aa5.42□□□□□ -1.54
CNOT9-207ENST00000489687 ANKHD1Q8IWZ3 2542 aaKnown RBP5.42□□□□□ -1.54
CNOT9-207ENST00000489687 GTF3C1Q12789 2109 aa5.42□□□□□ -1.54
CNOT9-207ENST00000489687 INTS1Q8N201 2190 aaKnown RBP5.42□□□□□ -1.54
CNOT9-207ENST00000489687 ZFHX3Q15911 3703 aa5.41□□□□□ -1.54
CNOT9-207ENST00000489687 LOC102723996A0A087X1L8 192 aa5.41□□□□□ -1.54
CNOT9-207ENST00000489687 TRAV17A0A0B4J275 112 aa5.41□□□□□ -1.54
CNOT9-207ENST00000489687 TRGV8A0A0C4DH27 118 aa5.41□□□□□ -1.54
CNOT9-207ENST00000489687 MYOCOSA0A1B0GUC4 107 aa5.41□□□□□ -1.54
CNOT9-207ENST00000489687 FAM95CA0A1B0GW59 222 aa5.41□□□□□ -1.54
CNOT9-207ENST00000489687 A0A1W2PQ72 361 aa5.41□□□□□ -1.54
CNOT9-207ENST00000489687 OR5H15A6NDH6 313 aa5.41□□□□□ -1.54
CNOT9-207ENST00000489687 ZNF98A6NK75 572 aa5.41□□□□□ -1.54
CNOT9-207ENST00000489687 A8MUA0 341 aa5.41□□□□□ -1.54
CNOT9-207ENST00000489687 LEUTXA8MZ59 168 aa5.41□□□□□ -1.54
CNOT9-207ENST00000489687 PRSS44E7EML9 344 aa5.41□□□□□ -1.54
CNOT9-207ENST00000489687 EREGO14944 169 aa5.41□□□□□ -1.54
CNOT9-207ENST00000489687 PHGDHO43175 533 aaKnown RBP5.41□□□□□ -1.54
CNOT9-207ENST00000489687 SEC14L5O43304 696 aa5.41□□□□□ -1.54
CNOT9-207ENST00000489687 PEX14O75381 377 aa5.41□□□□□ -1.54
CNOT9-207ENST00000489687 UGT2B17O75795 530 aa5.41□□□□□ -1.54
CNOT9-207ENST00000489687 CCNKO75909 580 aa5.41□□□□□ -1.54
CNOT9-207ENST00000489687 OR7A10O76100 309 aa5.41□□□□□ -1.54
CNOT9-207ENST00000489687 NSA2O95478 260 aaKnown RBP5.41□□□□□ -1.54
CNOT9-207ENST00000489687 NADKO95544 446 aaPredicted RBP5.41□□□□□ -1.54
CNOT9-207ENST00000489687 C8GP07360 202 aa5.41□□□□□ -1.54
CNOT9-207ENST00000489687 SNRPB2P08579 225 aaKnown RBP5.41□□□□□ -1.54
CNOT9-207ENST00000489687 SLC35G6P0C7Q6 338 aa5.41□□□□□ -1.54
CNOT9-207ENST00000489687 VSIG8P0DPA2 414 aa5.41□□□□□ -1.54
CNOT9-207ENST00000489687 ICAM2P13598 275 aa5.41□□□□□ -1.54
CNOT9-207ENST00000489687 PRF1P14222 555 aa5.41□□□□□ -1.54
CNOT9-207ENST00000489687 NPPBP16860 134 aa5.41□□□□□ -1.54
CNOT9-207ENST00000489687 ZNF182P17025 639 aaPredicted RBP5.41□□□□□ -1.54
CNOT9-207ENST00000489687 ZNF37AP17032 561 aaPredicted RBP5.41□□□□□ -1.54
CNOT9-207ENST00000489687 CD33P20138 364 aa5.41□□□□□ -1.54
CNOT9-207ENST00000489687 RAB3AP20336 220 aa5.41□□□□□ -1.54
CNOT9-207ENST00000489687 ME2P23368 584 aa5.41□□□□□ -1.54
CNOT9-207ENST00000489687 GRNP28799 593 aaKnown RBP5.41□□□□□ -1.54
CNOT9-207ENST00000489687 PPP2R1BP30154 601 aa5.41□□□□□ -1.54
CNOT9-207ENST00000489687 KRT20P35900 424 aa5.41□□□□□ -1.54
CNOT9-207ENST00000489687 SERPINB5P36952 375 aa5.41□□□□□ -1.54
CNOT9-207ENST00000489687 RFC3P40938 356 aa5.41□□□□□ -1.54
CNOT9-207ENST00000489687 GDF5P43026 501 aa5.41□□□□□ -1.54
CNOT9-207ENST00000489687 CENPAP49450 140 aa5.41□□□□□ -1.54
CNOT9-207ENST00000489687 CCR8P51685 355 aa5.41□□□□□ -1.54
CNOT9-207ENST00000489687 UGT2B15P54855 530 aa5.41□□□□□ -1.54
CNOT9-207ENST00000489687 DEFA1P59665 94 aa5.41□□□□□ -1.54
CNOT9-207ENST00000489687 DEFA3P59666 94 aa5.41□□□□□ -1.54
CNOT9-207ENST00000489687 IL2P60568 153 aa5.41□□□□□ -1.54
CNOT9-207ENST00000489687 GPR85P60893 370 aa5.41□□□□□ -1.54
CNOT9-207ENST00000489687 VBP1P61758 197 aa5.41□□□□□ -1.54
CNOT9-207ENST00000489687 HSF1Q00613 529 aa5.41□□□□□ -1.54
CNOT9-207ENST00000489687 REEP5Q00765 189 aa5.41□□□□□ -1.54
CNOT9-207ENST00000489687 FLI1Q01543 452 aaPredicted RBP5.41□□□□□ -1.54
CNOT9-207ENST00000489687 SF3A3Q12874 501 aaKnown RBP eCLIP5.41□□□□□ -1.54
CNOT9-207ENST00000489687 MRPL28Q13084 256 aaKnown RBP5.41□□□□□ -1.54
CNOT9-207ENST00000489687 PDIA2Q13087 525 aaKnown RBP5.41□□□□□ -1.54
CNOT9-207ENST00000489687 FADDQ13158 208 aa5.41□□□□□ -1.54
CNOT9-207ENST00000489687 TOP3AQ13472 1001 aaPredicted RBP5.41□□□□□ -1.54
CNOT9-207ENST00000489687 FLOT2Q14254 428 aa5.41□□□□□ -1.54
CNOT9-207ENST00000489687 TSNQ15631 228 aaKnown RBP5.41□□□□□ -1.54
CNOT9-207ENST00000489687 NDUFA9Q16795 377 aa5.41□□□□□ -1.54
CNOT9-207ENST00000489687 PPP1R3AQ16821 1122 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms