RNA–Protein interactions for RNA: ENST00000489230.1

COL4A5-206, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 5

Gene COL4A5, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-206ENST00000489230 PMM1Q92871 262 aa11.43□□□□□ -0.58
COL4A5-206ENST00000489230 VPS33AQ96AX1 596 aa11.43□□□□□ -0.58
COL4A5-206ENST00000489230 SNRNP40Q96DI7 357 aaKnown RBP11.43□□□□□ -0.58
COL4A5-206ENST00000489230 SLC35G5Q96KT7 338 aa11.43□□□□□ -0.58
COL4A5-206ENST00000489230 PSMG3-AS1Q96PY0 264 aa11.43□□□□□ -0.58
COL4A5-206ENST00000489230 BARD1Q99728 777 aaKnown RBP11.43□□□□□ -0.58
COL4A5-206ENST00000489230 ZNF385DQ9H6B1 395 aa11.43□□□□□ -0.58
COL4A5-206ENST00000489230 METTL7AQ9H8H3 244 aa11.43□□□□□ -0.58
COL4A5-206ENST00000489230 IL1RL2Q9HB29 575 aa11.43□□□□□ -0.58
COL4A5-206ENST00000489230 SERHLQ9NQF3 203 aa11.43□□□□□ -0.58
COL4A5-206ENST00000489230 SAR1AQ9NR31 198 aa11.43□□□□□ -0.58
COL4A5-206ENST00000489230 MAP10Q9P2G4 905 aa11.43□□□□□ -0.58
COL4A5-206ENST00000489230 LEF1Q9UJU2 399 aaPredicted RBP11.43□□□□□ -0.58
COL4A5-206ENST00000489230 BOKQ9UMX3 212 aaPredicted RBP11.43□□□□□ -0.58
COL4A5-206ENST00000489230 LIPT1Q9Y234 373 aa11.43□□□□□ -0.58
COL4A5-206ENST00000489230 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.43□□□□□ -0.58
COL4A5-206ENST00000489230 TNRC6AQ8NDV7 1962 aaKnown RBP11.42□□□□□ -0.58
COL4A5-206ENST00000489230 C9JVG2 144 aa11.42□□□□□ -0.58
COL4A5-206ENST00000489230 ACOT7O00154 380 aa11.42□□□□□ -0.58
COL4A5-206ENST00000489230 NR5A2O00482 541 aa11.42□□□□□ -0.58
COL4A5-206ENST00000489230 SNX3O60493 162 aa11.42□□□□□ -0.58
COL4A5-206ENST00000489230 KCNK2O95069 426 aa11.42□□□□□ -0.58
COL4A5-206ENST00000489230 NPPAP01160 153 aa11.42□□□□□ -0.58
COL4A5-206ENST00000489230 CCL3P10147 92 aa11.42□□□□□ -0.58
COL4A5-206ENST00000489230 MAN2A2P49641 1150 aa11.42□□□□□ -0.58
COL4A5-206ENST00000489230 KHKP50053 298 aa11.42□□□□□ -0.58
COL4A5-206ENST00000489230 MEOX1P50221 254 aa11.42□□□□□ -0.58
COL4A5-206ENST00000489230 ST13P50502 369 aaKnown RBP11.42□□□□□ -0.58
COL4A5-206ENST00000489230 KCNJ2P63252 427 aa11.42□□□□□ -0.58
COL4A5-206ENST00000489230 ALDH6A1Q02252 535 aaKnown RBP11.42□□□□□ -0.58
COL4A5-206ENST00000489230 PLGLB1Q02325 96 aa11.42□□□□□ -0.58
COL4A5-206ENST00000489230 GNA13Q14344 377 aa11.42□□□□□ -0.58
COL4A5-206ENST00000489230 DUSP5Q16690 384 aa11.42□□□□□ -0.58
COL4A5-206ENST00000489230 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.42□□□□□ -0.58
COL4A5-206ENST00000489230 SLC22A16Q86VW1 577 aa11.42□□□□□ -0.58
COL4A5-206ENST00000489230 OR2M7Q8NG81 312 aa11.42□□□□□ -0.58
COL4A5-206ENST00000489230 OR4N2Q8NGD1 307 aa11.42□□□□□ -0.58
COL4A5-206ENST00000489230 OR5AK3PQ8NH89 298 aa11.42□□□□□ -0.58
COL4A5-206ENST00000489230 GRHL3Q8TE85 626 aa11.42□□□□□ -0.58
COL4A5-206ENST00000489230 HGDQ93099 445 aa11.42□□□□□ -0.58
COL4A5-206ENST00000489230 OR7D2Q96RA2 312 aa11.42□□□□□ -0.58
COL4A5-206ENST00000489230 YIPF4Q9BSR8 244 aa11.42□□□□□ -0.58
COL4A5-206ENST00000489230 INPP5KQ9BT40 448 aa11.42□□□□□ -0.58
COL4A5-206ENST00000489230 DOHHQ9BU89 302 aa11.42□□□□□ -0.58
COL4A5-206ENST00000489230 FAM107BQ9H098 131 aa11.42□□□□□ -0.58
COL4A5-206ENST00000489230 ZFP64Q9NPA5 681 aa11.42□□□□□ -0.58
COL4A5-206ENST00000489230 SLC52A3Q9NQ40 469 aa11.42□□□□□ -0.58
COL4A5-206ENST00000489230 POLE3Q9NRF9 147 aa11.42□□□□□ -0.58
COL4A5-206ENST00000489230 UBQLN4Q9NRR5 601 aa11.42□□□□□ -0.58
COL4A5-206ENST00000489230 OLAHQ9NV23 265 aa11.42□□□□□ -0.58
COL4A5-206ENST00000489230 LUZP4Q9P127 313 aa11.42□□□□□ -0.58
COL4A5-206ENST00000489230 B4GALT7Q9UBV7 327 aa11.42□□□□□ -0.58
COL4A5-206ENST00000489230 ADAM21Q9UKJ8 722 aa11.42□□□□□ -0.58
COL4A5-206ENST00000489230 CNOT11Q9UKZ1 510 aaKnown RBP11.42□□□□□ -0.58
COL4A5-206ENST00000489230 ABCG2Q9UNQ0 655 aa11.42□□□□□ -0.58
COL4A5-206ENST00000489230 CORO2BQ9UQ03 480 aa11.42□□□□□ -0.58
COL4A5-206ENST00000489230 CPAMD8Q8IZJ3 1885 aa11.42□□□□□ -0.58
COL4A5-206ENST00000489230 TMEM247A6NEH6 219 aa11.41□□□□□ -0.58
COL4A5-206ENST00000489230 BBIP1A8MTZ0 92 aa11.41□□□□□ -0.58
COL4A5-206ENST00000489230 EVPLLA8MZ36 301 aa11.41□□□□□ -0.58
COL4A5-206ENST00000489230 ICOSLGO75144 302 aa11.41□□□□□ -0.58
COL4A5-206ENST00000489230 UGT2B11O75310 529 aa11.41□□□□□ -0.58
COL4A5-206ENST00000489230 NME6O75414 186 aaPredicted RBP11.41□□□□□ -0.58
COL4A5-206ENST00000489230 GSNP06396 782 aa11.41□□□□□ -0.58
COL4A5-206ENST00000489230 NGFRP08138 427 aa11.41□□□□□ -0.58
COL4A5-206ENST00000489230 ACP2P11117 423 aa11.41□□□□□ -0.58
COL4A5-206ENST00000489230 EDN3P14138 238 aa11.41□□□□□ -0.58
COL4A5-206ENST00000489230 HPGDP15428 266 aa11.41□□□□□ -0.58
COL4A5-206ENST00000489230 ELAVL4P26378 380 aaKnown RBP11.41□□□□□ -0.58
COL4A5-206ENST00000489230 MLLT10P55197 1068 aa11.41□□□□□ -0.58
COL4A5-206ENST00000489230 PPIAP62937 165 aaKnown RBP11.41□□□□□ -0.58
COL4A5-206ENST00000489230 SF3A3Q12874 501 aaKnown RBP eCLIP11.41□□□□□ -0.58
COL4A5-206ENST00000489230 KLF10Q13118 480 aa11.41□□□□□ -0.58
COL4A5-206ENST00000489230 HYAL4Q2M3T9 481 aa11.41□□□□□ -0.58
COL4A5-206ENST00000489230 ARHGAP11BQ3KRB8 267 aa11.41□□□□□ -0.58
COL4A5-206ENST00000489230 MMEL1Q495T6 779 aa11.41□□□□□ -0.58
COL4A5-206ENST00000489230 COQ5Q5HYK3 327 aa11.41□□□□□ -0.58
COL4A5-206ENST00000489230 LRIF1Q5T3J3 769 aa11.41□□□□□ -0.58
COL4A5-206ENST00000489230 AP1ARQ63HQ0 302 aa11.41□□□□□ -0.58
COL4A5-206ENST00000489230 SLC2A7Q6PXP3 512 aa11.41□□□□□ -0.58
COL4A5-206ENST00000489230 ANGPTL8Q6UXH0 198 aa11.41□□□□□ -0.58
COL4A5-206ENST00000489230 WDR53Q7Z5U6 358 aaPredicted RBP11.41□□□□□ -0.58
COL4A5-206ENST00000489230 PIGWQ7Z7B1 504 aa11.41□□□□□ -0.58
COL4A5-206ENST00000489230 DPP10Q8N608 796 aa11.41□□□□□ -0.58
COL4A5-206ENST00000489230 ZNF527Q8NB42 609 aa11.41□□□□□ -0.58
COL4A5-206ENST00000489230 PCYOX1LQ8NBM8 494 aa11.41□□□□□ -0.58
COL4A5-206ENST00000489230 RP9Q8TA86 221 aaKnown RBP11.41□□□□□ -0.58
COL4A5-206ENST00000489230 ZFP90Q8TF47 636 aa11.41□□□□□ -0.58
COL4A5-206ENST00000489230 XAGE5Q8WWM1 108 aa11.41□□□□□ -0.58
COL4A5-206ENST00000489230 OIT3Q8WWZ8 545 aa11.41□□□□□ -0.58
COL4A5-206ENST00000489230 PIK3R3Q92569 461 aa11.41□□□□□ -0.58
COL4A5-206ENST00000489230 MIB2Q96AX9 1013 aa11.41□□□□□ -0.58
COL4A5-206ENST00000489230 EFHD2Q96C19 240 aaPredicted RBP11.41□□□□□ -0.58
COL4A5-206ENST00000489230 RMND5BQ96G75 393 aaPredicted RBP11.41□□□□□ -0.58
COL4A5-206ENST00000489230 TMEM41AQ96HV5 264 aa11.41□□□□□ -0.58
COL4A5-206ENST00000489230 TAAR6Q96RI8 345 aa11.41□□□□□ -0.58
COL4A5-206ENST00000489230 SH3GL1Q99961 368 aa11.41□□□□□ -0.58
COL4A5-206ENST00000489230 HES7Q9BYE0 225 aa11.41□□□□□ -0.58
COL4A5-206ENST00000489230 TPT1P8Q9HAU6 139 aa11.41□□□□□ -0.58
COL4A5-206ENST00000489230 ASF1BQ9NVP2 202 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms