RNA–Protein interactions for RNA: ENST00000489045.5

COL9A3-213, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-213ENST00000489045 AKAP10O43572 662 aa20.88■□□□□ 0.93
COL9A3-213ENST00000489045 NPHS1O60500 1241 aa20.88■□□□□ 0.93
COL9A3-213ENST00000489045 ZWINTO95229 277 aa20.88■□□□□ 0.93
COL9A3-213ENST00000489045 TCEA1P23193 301 aaKnown RBP20.88■□□□□ 0.93
COL9A3-213ENST00000489045 GAB1Q13480 694 aa20.88■□□□□ 0.93
COL9A3-213ENST00000489045 ZNHIT3Q15649 155 aaPredicted RBP20.88■□□□□ 0.93
COL9A3-213ENST00000489045 DECR1Q16698 335 aa20.88■□□□□ 0.93
COL9A3-213ENST00000489045 GALNTL6Q49A17 601 aa20.88■□□□□ 0.93
COL9A3-213ENST00000489045 RFTN2Q52LD8 501 aaPredicted RBP20.88■□□□□ 0.93
COL9A3-213ENST00000489045 ZNF385BQ569K4 471 aa20.88■□□□□ 0.93
COL9A3-213ENST00000489045 DDIASQ8IXT1 998 aa20.88■□□□□ 0.93
COL9A3-213ENST00000489045 C9orf106Q8NAJ2 232 aa20.88■□□□□ 0.93
COL9A3-213ENST00000489045 OR4K17Q8NGC6 315 aa20.88■□□□□ 0.93
COL9A3-213ENST00000489045 CLHC1Q8NHS4 586 aa20.88■□□□□ 0.93
COL9A3-213ENST00000489045 AENQ8WTP8 325 aaKnown RBP20.88■□□□□ 0.93
COL9A3-213ENST00000489045 TWIST2Q8WVJ9 160 aa20.88■□□□□ 0.93
COL9A3-213ENST00000489045 CIDECQ96AQ7 238 aaPredicted RBP20.88■□□□□ 0.93
COL9A3-213ENST00000489045 ZNF764Q96H86 408 aaPredicted RBP20.88■□□□□ 0.93
COL9A3-213ENST00000489045 SFXN2Q96NB2 322 aa20.88■□□□□ 0.93
COL9A3-213ENST00000489045 LMF2Q9BU23 707 aaKnown RBP20.88■□□□□ 0.93
COL9A3-213ENST00000489045 FLRT3Q9NZU0 649 aa20.88■□□□□ 0.93
COL9A3-213ENST00000489045 PPP4R1LQ9P1A2 415 aa20.88■□□□□ 0.93
COL9A3-213ENST00000489045 FADS1O60427 444 aa20.87■□□□□ 0.93
COL9A3-213ENST00000489045 IFI6P09912 130 aa20.87■□□□□ 0.93
COL9A3-213ENST00000489045 CTSSP25774 331 aa20.87■□□□□ 0.93
COL9A3-213ENST00000489045 DPP4P27487 766 aa20.87■□□□□ 0.93
COL9A3-213ENST00000489045 GPC1P35052 558 aa20.87■□□□□ 0.93
COL9A3-213ENST00000489045 STARP49675 285 aa20.87■□□□□ 0.93
COL9A3-213ENST00000489045 LHX2P50458 406 aa20.87■□□□□ 0.93
COL9A3-213ENST00000489045 AGFG1P52594 562 aaKnown RBP20.87■□□□□ 0.93
COL9A3-213ENST00000489045 FBXL19-AS1Q494R0 122 aa20.87■□□□□ 0.93
COL9A3-213ENST00000489045 ARL13AQ5H913 290 aaPredicted RBP20.87■□□□□ 0.93
COL9A3-213ENST00000489045 AAGABQ6PD74 315 aa20.87■□□□□ 0.93
COL9A3-213ENST00000489045 ZZZ3Q8IYH5 903 aa20.87■□□□□ 0.93
COL9A3-213ENST00000489045 TCP10LQ8TDR4 215 aa20.87■□□□□ 0.93
COL9A3-213ENST00000489045 RNASE6Q93091 150 aaKnown RBP20.87■□□□□ 0.93
COL9A3-213ENST00000489045 PPCDCQ96CD2 204 aa20.87■□□□□ 0.93
COL9A3-213ENST00000489045 LRRC46Q96FV0 321 aa20.87■□□□□ 0.93
COL9A3-213ENST00000489045 REEP4Q9H6H4 257 aa20.87■□□□□ 0.93
COL9A3-213ENST00000489045 EQTNQ9NQ60 294 aa20.87■□□□□ 0.93
COL9A3-213ENST00000489045 BAIAP2L1Q9UHR4 511 aa20.87■□□□□ 0.93
COL9A3-213ENST00000489045 ABCG2Q9UNQ0 655 aa20.87■□□□□ 0.93
COL9A3-213ENST00000489045 RPH3AQ9Y2J0 694 aaPredicted RBP20.87■□□□□ 0.93
COL9A3-213ENST00000489045 TMED5Q9Y3A6 229 aa20.87■□□□□ 0.93
COL9A3-213ENST00000489045 MRPS18CQ9Y3D5 142 aaKnown RBP20.87■□□□□ 0.93
COL9A3-213ENST00000489045 TRAF6Q9Y4K3 522 aa20.87■□□□□ 0.93
COL9A3-213ENST00000489045 HRNRQ86YZ3 2850 aaPredicted RBP20.86■□□□□ 0.93
COL9A3-213ENST00000489045 TBX19O60806 448 aa20.86■□□□□ 0.93
COL9A3-213ENST00000489045 FGF4P08620 206 aa20.86■□□□□ 0.93
COL9A3-213ENST00000489045 POU3F2P20265 443 aaPredicted RBP20.86■□□□□ 0.93
COL9A3-213ENST00000489045 KIR2DL3P43628 341 aa20.86■□□□□ 0.93
COL9A3-213ENST00000489045 RFX3P48380 749 aa20.86■□□□□ 0.93
COL9A3-213ENST00000489045 DGKQP52824 942 aa20.86■□□□□ 0.93
COL9A3-213ENST00000489045 STX5Q13190 355 aa20.86■□□□□ 0.93
COL9A3-213ENST00000489045 UGT3A2Q3SY77 523 aa20.86■□□□□ 0.93
COL9A3-213ENST00000489045 ZCCHC23Q6ZST2 131 aa20.86■□□□□ 0.93
COL9A3-213ENST00000489045 FADS6Q8N9I5 356 aa20.86■□□□□ 0.93
COL9A3-213ENST00000489045 ZFP28Q8NHY6 868 aa20.86■□□□□ 0.93
COL9A3-213ENST00000489045 AGR3Q8TD06 166 aa20.86■□□□□ 0.93
COL9A3-213ENST00000489045 G6PC3Q9BUM1 346 aa20.86■□□□□ 0.93
COL9A3-213ENST00000489045 ROPN1BQ9BZX4 212 aaPredicted RBP20.86■□□□□ 0.93
COL9A3-213ENST00000489045 ROPN1Q9HAT0 212 aaPredicted RBP20.86■□□□□ 0.93
COL9A3-213ENST00000489045 EML4Q9HC35 981 aaKnown RBP20.86■□□□□ 0.93
COL9A3-213ENST00000489045 SH3BP4Q9P0V3 963 aa20.86■□□□□ 0.93
COL9A3-213ENST00000489045 MRTO4Q9UKD2 239 aaKnown RBP20.86■□□□□ 0.93
COL9A3-213ENST00000489045 CLCA1A8K7I4 914 aa20.85■□□□□ 0.93
COL9A3-213ENST00000489045 PIP5K1BO14986 540 aa20.85■□□□□ 0.93
COL9A3-213ENST00000489045 ZIC3O60481 467 aa20.85■□□□□ 0.93
COL9A3-213ENST00000489045 IL33O95760 270 aa20.85■□□□□ 0.93
COL9A3-213ENST00000489045 TMIGD3P0DMS9 266 aaPredicted RBP20.85■□□□□ 0.93
COL9A3-213ENST00000489045 PRPS2P11908 318 aa20.85■□□□□ 0.93
COL9A3-213ENST00000489045 GABRA3P34903 492 aa20.85■□□□□ 0.93
COL9A3-213ENST00000489045 OPRM1P35372 400 aa20.85■□□□□ 0.93
COL9A3-213ENST00000489045 PEX19P40855 299 aa20.85■□□□□ 0.93
COL9A3-213ENST00000489045 DSCR4P56555 118 aaPredicted RBP20.85■□□□□ 0.93
COL9A3-213ENST00000489045 CLDN18P56856 261 aa20.85■□□□□ 0.93
COL9A3-213ENST00000489045 PDE7AQ13946 482 aa20.85■□□□□ 0.93
COL9A3-213ENST00000489045 EMBQ6PCB8 327 aa20.85■□□□□ 0.93
COL9A3-213ENST00000489045 PLXDC2Q6UX71 529 aa20.85■□□□□ 0.93
COL9A3-213ENST00000489045 ADGRE4PQ86SQ3 457 aa20.85■□□□□ 0.93
COL9A3-213ENST00000489045 RTN4RQ9BZR6 473 aa20.85■□□□□ 0.93
COL9A3-213ENST00000489045 DSN1Q9H410 356 aa20.85■□□□□ 0.93
COL9A3-213ENST00000489045 FAM120CQ9NX05 1096 aaKnown RBP20.85■□□□□ 0.93
COL9A3-213ENST00000489045 CRIM1Q9NZV1 1036 aa20.85■□□□□ 0.93
COL9A3-213ENST00000489045 HIVEP1P15822 2718 aa20.84■□□□□ 0.93
COL9A3-213ENST00000489045 GXYLT2A0PJZ3 443 aa20.84■□□□□ 0.93
COL9A3-213ENST00000489045 EEF1E1-BLOC1S5C9J1V9 151 aa20.84■□□□□ 0.93
COL9A3-213ENST00000489045 EEF1E1O43324 174 aaKnown RBP20.84■□□□□ 0.93
COL9A3-213ENST00000489045 BCKDHAP12694 445 aa20.84■□□□□ 0.93
COL9A3-213ENST00000489045 CREB1P16220 341 aa20.84■□□□□ 0.93
COL9A3-213ENST00000489045 ZNF708P17019 499 aa20.84■□□□□ 0.93
COL9A3-213ENST00000489045 CHMP24386 653 aa20.84■□□□□ 0.93
COL9A3-213ENST00000489045 PSMD4P55036 377 aaKnown RBP20.84■□□□□ 0.93
COL9A3-213ENST00000489045 B3GALT5-AS1P59052 145 aa20.84■□□□□ 0.93
COL9A3-213ENST00000489045 HOMEZQ8IX15 550 aa20.84■□□□□ 0.93
COL9A3-213ENST00000489045 OR2M3Q8NG83 312 aa20.84■□□□□ 0.93
COL9A3-213ENST00000489045 PIK3R3Q92569 461 aa20.84■□□□□ 0.93
COL9A3-213ENST00000489045 CAVIN3Q969G5 261 aa20.84■□□□□ 0.93
COL9A3-213ENST00000489045 ZBED6CLQ96FA7 236 aaPredicted RBP20.84■□□□□ 0.93
COL9A3-213ENST00000489045 C3orf14Q9HBI5 128 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms