RNA–Protein interactions for RNA: ENST00000487062.1

SF3A3-206, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-206ENST00000487062 JRKO75564 520 aa6.55□□□□□ -1.36
SF3A3-206ENST00000487062 CCNB2O95067 398 aa6.55□□□□□ -1.36
SF3A3-206ENST00000487062 OXSR1O95747 527 aaPredicted RBP6.55□□□□□ -1.36
SF3A3-206ENST00000487062 IL2RAP01589 272 aa6.55□□□□□ -1.36
SF3A3-206ENST00000487062 H1F0P07305 194 aaKnown RBP6.55□□□□□ -1.36
SF3A3-206ENST00000487062 ZNF806P0C7X5 589 aa6.55□□□□□ -1.36
SF3A3-206ENST00000487062 ITGAMP11215 1152 aa6.55□□□□□ -1.36
SF3A3-206ENST00000487062 FGF5P12034 268 aa6.55□□□□□ -1.36
SF3A3-206ENST00000487062 AGXTP21549 392 aa6.55□□□□□ -1.36
SF3A3-206ENST00000487062 PRKACGP22612 351 aa6.55□□□□□ -1.36
SF3A3-206ENST00000487062 SSTR4P31391 388 aa6.55□□□□□ -1.36
SF3A3-206ENST00000487062 TRHRP34981 398 aaPredicted RBP6.55□□□□□ -1.36
SF3A3-206ENST00000487062 RORAP35398 523 aa6.55□□□□□ -1.36
SF3A3-206ENST00000487062 YAP1P46937 504 aaKnown RBP6.55□□□□□ -1.36
SF3A3-206ENST00000487062 EMDP50402 254 aa6.55□□□□□ -1.36
SF3A3-206ENST00000487062 DAPP51397 102 aa6.55□□□□□ -1.36
SF3A3-206ENST00000487062 HMGA2P52926 109 aa6.55□□□□□ -1.36
SF3A3-206ENST00000487062 PDX1P52945 283 aa6.55□□□□□ -1.36
SF3A3-206ENST00000487062 PSMD4P55036 377 aaKnown RBP6.55□□□□□ -1.36
SF3A3-206ENST00000487062 DCDP81605 110 aaKnown RBP6.55□□□□□ -1.36
SF3A3-206ENST00000487062 IL1RL1Q01638 556 aa6.55□□□□□ -1.36
SF3A3-206ENST00000487062 RHAGQ02094 409 aa6.55□□□□□ -1.36
SF3A3-206ENST00000487062 DUSP8Q13202 625 aa6.55□□□□□ -1.36
SF3A3-206ENST00000487062 IL18R1Q13478 541 aa6.55□□□□□ -1.36
SF3A3-206ENST00000487062 BLMHQ13867 455 aa6.55□□□□□ -1.36
SF3A3-206ENST00000487062 PUM1Q14671 1186 aaKnown RBP eCLIP6.55□□□□□ -1.361e-11■□□□□ 9.9
SF3A3-206ENST00000487062 ELAVL1Q15717 326 aaKnown RBP6.55□□□□□ -1.36
SF3A3-206ENST00000487062 GPR68Q15743 365 aa6.55□□□□□ -1.36
SF3A3-206ENST00000487062 ZSWIM7Q19AV6 140 aa6.55□□□□□ -1.36
SF3A3-206ENST00000487062 MICAQ29983 383 aa6.55□□□□□ -1.36
SF3A3-206ENST00000487062 EXOC3L2Q2M3D2 409 aa6.55□□□□□ -1.36
SF3A3-206ENST00000487062 ZIK1Q3SY52 487 aaPredicted RBP6.55□□□□□ -1.36
SF3A3-206ENST00000487062 CYP27C1Q4G0S4 372 aa6.55□□□□□ -1.36
SF3A3-206ENST00000487062 NKAIN1Q4KMZ8 207 aa6.55□□□□□ -1.36
SF3A3-206ENST00000487062 LIN52Q52LA3 116 aa6.55□□□□□ -1.36
SF3A3-206ENST00000487062 COLEC12Q5KU26 742 aa6.55□□□□□ -1.36
SF3A3-206ENST00000487062 DCST1Q5T197 706 aa6.55□□□□□ -1.36
SF3A3-206ENST00000487062 PRAMEF17Q5VTA0 474 aa6.55□□□□□ -1.36
SF3A3-206ENST00000487062 KDM4DQ6B0I6 523 aa6.55□□□□□ -1.36
SF3A3-206ENST00000487062 TYW3Q6IPR3 259 aaKnown RBP6.55□□□□□ -1.36
SF3A3-206ENST00000487062 TCEAL6Q6IPX3 200 aa6.55□□□□□ -1.36
SF3A3-206ENST00000487062 TMEM154Q6P9G4 183 aa6.55□□□□□ -1.36
SF3A3-206ENST00000487062 TTC33Q6PID6 262 aaPredicted RBP6.55□□□□□ -1.36
SF3A3-206ENST00000487062 UGT2A3Q6UWM9 527 aa6.55□□□□□ -1.36
SF3A3-206ENST00000487062 DGAT2L6Q6ZPD8 337 aa6.55□□□□□ -1.36
SF3A3-206ENST00000487062 TSEN54Q7Z6J9 526 aaKnown RBP6.55□□□□□ -1.36
SF3A3-206ENST00000487062 ZNF605Q86T29 641 aa6.55□□□□□ -1.36
SF3A3-206ENST00000487062 C8orf59Q8N0T1 100 aaPredicted RBP6.55□□□□□ -1.36
SF3A3-206ENST00000487062 SHISA5Q8N114 240 aa6.55□□□□□ -1.36
SF3A3-206ENST00000487062 SIMC1Q8NDZ2 872 aa6.55□□□□□ -1.36
SF3A3-206ENST00000487062 SETD9Q8NE22 299 aa6.55□□□□□ -1.36
SF3A3-206ENST00000487062 PLPP5Q8NEB5 264 aa6.55□□□□□ -1.36
SF3A3-206ENST00000487062 OR10G2Q8NGC3 310 aa6.55□□□□□ -1.36
SF3A3-206ENST00000487062 DOK4Q8TEW6 326 aa6.55□□□□□ -1.36
SF3A3-206ENST00000487062 APOBEC4Q8WW27 367 aaKnown RBP6.55□□□□□ -1.36
SF3A3-206ENST00000487062 DAZLQ92904 295 aaKnown RBP6.55□□□□□ -1.36
SF3A3-206ENST00000487062 TCEAL3Q969E4 200 aa6.55□□□□□ -1.36
SF3A3-206ENST00000487062 FBXL20Q96IG2 436 aa6.55□□□□□ -1.36
SF3A3-206ENST00000487062 PRRC1Q96M27 445 aa6.55□□□□□ -1.36
SF3A3-206ENST00000487062 SLC46A1Q96NT5 459 aa6.55□□□□□ -1.36
SF3A3-206ENST00000487062 ALPK1Q96QP1 1244 aa6.55□□□□□ -1.36
SF3A3-206ENST00000487062 ARHGDIGQ99819 225 aa6.55□□□□□ -1.36
SF3A3-206ENST00000487062 PSD2Q9BQI7 771 aa6.55□□□□□ -1.36
SF3A3-206ENST00000487062 G6PC3Q9BUM1 346 aa6.55□□□□□ -1.36
SF3A3-206ENST00000487062 FNDC11Q9BVV2 318 aa6.55□□□□□ -1.36
SF3A3-206ENST00000487062 YTHDF1Q9BYJ9 559 aaKnown RBP6.55□□□□□ -1.36
SF3A3-206ENST00000487062 ZNF350Q9GZX5 532 aa6.55□□□□□ -1.36
SF3A3-206ENST00000487062 ACER3Q9NUN7 267 aa6.55□□□□□ -1.36
SF3A3-206ENST00000487062 FAM118AQ9NWS6 357 aa6.55□□□□□ -1.36
SF3A3-206ENST00000487062 KCND3Q9UK17 655 aa6.55□□□□□ -1.36
SF3A3-206ENST00000487062 MRTO4Q9UKD2 239 aaKnown RBP6.55□□□□□ -1.36
SF3A3-206ENST00000487062 ACAD8Q9UKU7 415 aa6.55□□□□□ -1.36
SF3A3-206ENST00000487062 MKLN1Q9UL63 735 aa6.55□□□□□ -1.36
SF3A3-206ENST00000487062 MKL2Q9ULH7 1088 aa6.55□□□□□ -1.36
SF3A3-206ENST00000487062 ZNF443Q9Y2A4 671 aaPredicted RBP6.55□□□□□ -1.36
SF3A3-206ENST00000487062 POFUT2Q9Y2G5 429 aa6.55□□□□□ -1.36
SF3A3-206ENST00000487062 HCN4Q9Y3Q4 1203 aa6.55□□□□□ -1.36
SF3A3-206ENST00000487062 OR10H1Q9Y4A9 318 aa6.55□□□□□ -1.36
SF3A3-206ENST00000487062 CLDN16Q9Y5I7 305 aa6.55□□□□□ -1.36
SF3A3-206ENST00000487062 MAGED1Q9Y5V3 778 aaPredicted RBP6.55□□□□□ -1.36
SF3A3-206ENST00000487062 ZDBF2Q9HCK1 2354 aa6.54□□□□□ -1.36
SF3A3-206ENST00000487062 IGLV3-12A0A075B6K2 115 aa6.54□□□□□ -1.36
SF3A3-206ENST00000487062 IGKV3D-11A0A0A0MRZ8 115 aa6.54□□□□□ -1.36
SF3A3-206ENST00000487062 LOC100130705A0A1B0GUX0 176 aa6.54□□□□□ -1.36
SF3A3-206ENST00000487062 GXYLT2A0PJZ3 443 aa6.54□□□□□ -1.36
SF3A3-206ENST00000487062 PRAMEF25A6NGN4 478 aa6.54□□□□□ -1.36
SF3A3-206ENST00000487062 AGAP5A6NIR3 686 aa6.54□□□□□ -1.36
SF3A3-206ENST00000487062 A8MUA0 341 aa6.54□□□□□ -1.36
SF3A3-206ENST00000487062 PRR33A8MZF0 331 aa6.54□□□□□ -1.36
SF3A3-206ENST00000487062 J3KTA2 159 aa6.54□□□□□ -1.36
SF3A3-206ENST00000487062 M0R3H8 397 aa6.54□□□□□ -1.36
SF3A3-206ENST00000487062 FAAHO00519 579 aa6.54□□□□□ -1.36
SF3A3-206ENST00000487062 SLC16A6O15403 523 aa6.54□□□□□ -1.36
SF3A3-206ENST00000487062 HYAL3O43820 417 aaPredicted RBP6.54□□□□□ -1.36
SF3A3-206ENST00000487062 KIAA0513O60268 411 aa6.54□□□□□ -1.36
SF3A3-206ENST00000487062 BRINP1O60477 761 aa6.54□□□□□ -1.36
SF3A3-206ENST00000487062 FCMRO60667 390 aa6.54□□□□□ -1.36
SF3A3-206ENST00000487062 CPNE3O75131 537 aaKnown RBP6.54□□□□□ -1.36
SF3A3-206ENST00000487062 NME6O75414 186 aaPredicted RBP6.54□□□□□ -1.36
SF3A3-206ENST00000487062 UGT2B17O75795 530 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms