RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 MRPS18CQ9Y3D5 142 aaKnown RBP22.24■■□□□ 1.15
LIME1-206ENST00000487026 CCL27Q9Y4X3 112 aa22.24■■□□□ 1.15
LIME1-206ENST00000487026 FADS1O60427 444 aa22.23■■□□□ 1.15
LIME1-206ENST00000487026 RSL1D1O76021 490 aaKnown RBP22.23■■□□□ 1.15
LIME1-206ENST00000487026 UROSP10746 265 aa22.23■■□□□ 1.15
LIME1-206ENST00000487026 ZNF708P17019 499 aa22.23■■□□□ 1.15
LIME1-206ENST00000487026 NTSP30990 170 aa22.23■■□□□ 1.15
LIME1-206ENST00000487026 RFX3P48380 749 aa22.23■■□□□ 1.15
LIME1-206ENST00000487026 B3GALT5-AS1P59052 145 aa22.23■■□□□ 1.15
LIME1-206ENST00000487026 MRPS22P82650 360 aaKnown RBP22.23■■□□□ 1.15
LIME1-206ENST00000487026 STX5Q13190 355 aa22.23■■□□□ 1.15
LIME1-206ENST00000487026 ANKRD26P1Q6NSI1 321 aa22.23■■□□□ 1.15
LIME1-206ENST00000487026 FAM76AQ8TAV0 307 aa22.23■■□□□ 1.15
LIME1-206ENST00000487026 EPS8L3Q8TE67 593 aaKnown RBP22.23■■□□□ 1.15
LIME1-206ENST00000487026 ELP4Q96EB1 424 aa22.23■■□□□ 1.15
LIME1-206ENST00000487026 UCN2Q96RP3 112 aa22.23■■□□□ 1.15
LIME1-206ENST00000487026 RBM24Q9BX46 236 aaKnown RBP22.23■■□□□ 1.15
LIME1-206ENST00000487026 RTN4RQ9BZR6 473 aa22.23■■□□□ 1.15
LIME1-206ENST00000487026 DDX18Q9NVP1 670 aaKnown RBP22.23■■□□□ 1.15
LIME1-206ENST00000487026 COPEO14579 308 aa22.22■■□□□ 1.15
LIME1-206ENST00000487026 TGM6O95932 706 aa22.22■■□□□ 1.15
LIME1-206ENST00000487026 CHMP24386 653 aa22.22■■□□□ 1.15
LIME1-206ENST00000487026 DSCR4P56555 118 aaPredicted RBP22.22■■□□□ 1.15
LIME1-206ENST00000487026 NAA20P61599 178 aa22.22■■□□□ 1.15
LIME1-206ENST00000487026 KIAA0040Q15053 153 aa22.22■■□□□ 1.15
LIME1-206ENST00000487026 CYP27C1Q4G0S4 372 aa22.22■■□□□ 1.15
LIME1-206ENST00000487026 FBXW10Q5XX13 1052 aa22.22■■□□□ 1.15
LIME1-206ENST00000487026 ZNF551Q7Z340 670 aaPredicted RBP22.22■■□□□ 1.15
LIME1-206ENST00000487026 UBQLNLQ8IYU4 475 aa22.22■■□□□ 1.15
LIME1-206ENST00000487026 CNPY4Q8N129 248 aa22.22■■□□□ 1.15
LIME1-206ENST00000487026 C4orf33Q8N1A6 199 aa22.22■■□□□ 1.15
LIME1-206ENST00000487026 OR2L13Q8N349 312 aa22.22■■□□□ 1.15
LIME1-206ENST00000487026 NINJ1Q92982 152 aa22.22■■□□□ 1.15
LIME1-206ENST00000487026 FOXC2Q99958 501 aa22.22■■□□□ 1.15
LIME1-206ENST00000487026 SFXN3Q9BWM7 321 aa22.22■■□□□ 1.15
LIME1-206ENST00000487026 WBP11Q9Y2W2 641 aaKnown RBP22.22■■□□□ 1.15
LIME1-206ENST00000487026 FIS1Q9Y3D6 152 aa22.22■■□□□ 1.15
LIME1-206ENST00000487026 H3BQF6 201 aa22.21■■□□□ 1.15
LIME1-206ENST00000487026 PSMG1O95456 288 aa22.21■■□□□ 1.15
LIME1-206ENST00000487026 KRT4P19013 534 aa22.21■■□□□ 1.15
LIME1-206ENST00000487026 HK1P19367 917 aa22.21■■□□□ 1.15
LIME1-206ENST00000487026 DECR1Q16698 335 aa22.21■■□□□ 1.15
LIME1-206ENST00000487026 MARCH3Q86UD3 253 aa22.21■■□□□ 1.15
LIME1-206ENST00000487026 TDRPQ86YL5 185 aa22.21■■□□□ 1.15
LIME1-206ENST00000487026 GRAMD2AQ8IUY3 354 aa22.21■■□□□ 1.15
LIME1-206ENST00000487026 C10orf107Q8IVU9 208 aa22.21■■□□□ 1.15
LIME1-206ENST00000487026 FADS6Q8N9I5 356 aa22.21■■□□□ 1.15
LIME1-206ENST00000487026 OR2M3Q8NG83 312 aa22.21■■□□□ 1.15
LIME1-206ENST00000487026 OR5M1Q8NGP8 315 aa22.21■■□□□ 1.15
LIME1-206ENST00000487026 ZFP3Q96NJ6 502 aa22.21■■□□□ 1.15
LIME1-206ENST00000487026 GALNT8Q9NY28 637 aa22.21■■□□□ 1.15
LIME1-206ENST00000487026 MED12LQ86YW9 2145 aa22.21■■□□□ 1.15
LIME1-206ENST00000487026 ZNF469Q96JG9 3925 aaPredicted RBP22.2■■□□□ 1.14
LIME1-206ENST00000487026 GXYLT2A0PJZ3 443 aa22.2■■□□□ 1.14
LIME1-206ENST00000487026 SLITRK5O94991 958 aa22.2■■□□□ 1.14
LIME1-206ENST00000487026 DNASE1P24855 282 aa22.2■■□□□ 1.14
LIME1-206ENST00000487026 CPA2P48052 419 aa22.2■■□□□ 1.14
LIME1-206ENST00000487026 SORDQ00796 357 aa22.2■■□□□ 1.14
LIME1-206ENST00000487026 LIPMQ5VYY2 423 aa22.2■■□□□ 1.14
LIME1-206ENST00000487026 IKBIPQ70UQ0 350 aa22.2■■□□□ 1.14
LIME1-206ENST00000487026 DUSP19Q8WTR2 217 aa22.2■■□□□ 1.14
LIME1-206ENST00000487026 CIDECQ96AQ7 238 aaPredicted RBP22.2■■□□□ 1.14
LIME1-206ENST00000487026 DTNBP1Q96EV8 351 aa22.2■■□□□ 1.14
LIME1-206ENST00000487026 CXXC4Q9H2H0 198 aa22.2■■□□□ 1.14
LIME1-206ENST00000487026 LRTM1Q9HBL6 345 aa22.2■■□□□ 1.14
LIME1-206ENST00000487026 Q9N2J8 555 aa22.2■■□□□ 1.14
LIME1-206ENST00000487026 EQTNQ9NQ60 294 aa22.2■■□□□ 1.14
LIME1-206ENST00000487026 H0YC42 278 aa22.19■■□□□ 1.14
LIME1-206ENST00000487026 AKAP10O43572 662 aa22.19■■□□□ 1.14
LIME1-206ENST00000487026 IL33O95760 270 aa22.19■■□□□ 1.14
LIME1-206ENST00000487026 GABRA3P34903 492 aa22.19■■□□□ 1.14
LIME1-206ENST00000487026 TPD52P55327 224 aaPredicted RBP22.19■■□□□ 1.14
LIME1-206ENST00000487026 CLDN15P56746 228 aa22.19■■□□□ 1.14
LIME1-206ENST00000487026 HSPB3Q12988 150 aa22.19■■□□□ 1.14
LIME1-206ENST00000487026 ZNHIT3Q15649 155 aaPredicted RBP22.19■■□□□ 1.14
LIME1-206ENST00000487026 RAET1LQ5VY80 246 aa22.19■■□□□ 1.14
LIME1-206ENST00000487026 Q6ZSR9 355 aa22.19■■□□□ 1.14
LIME1-206ENST00000487026 OR2T11Q8NH01 316 aa22.19■■□□□ 1.14
LIME1-206ENST00000487026 LMF2Q9BU23 707 aaKnown RBP22.19■■□□□ 1.14
LIME1-206ENST00000487026 GATA5Q9BWX5 397 aaPredicted RBP22.19■■□□□ 1.14
LIME1-206ENST00000487026 SDHAF3Q9NRP4 125 aa22.19■■□□□ 1.14
LIME1-206ENST00000487026 C1orf109Q9NX04 203 aa22.19■■□□□ 1.14
LIME1-206ENST00000487026 ZNF337Q9Y3M9 751 aa22.19■■□□□ 1.14
LIME1-206ENST00000487026 ABCA4P78363 2273 aa22.19■■□□□ 1.14
LIME1-206ENST00000487026 PCNX3Q9H6A9 2034 aa22.18■■□□□ 1.14
LIME1-206ENST00000487026 SLC28A1O00337 649 aa22.18■■□□□ 1.14
LIME1-206ENST00000487026 AZIN1O14977 448 aa22.18■■□□□ 1.14
LIME1-206ENST00000487026 RGS14O43566 566 aa22.18■■□□□ 1.14
LIME1-206ENST00000487026 GMFGO60234 142 aa22.18■■□□□ 1.14
LIME1-206ENST00000487026 DIAPH2O60879 1101 aa22.18■■□□□ 1.14
LIME1-206ENST00000487026 IGKV1D-16P01601 117 aa22.18■■□□□ 1.14
LIME1-206ENST00000487026 PEPDP12955 493 aa22.18■■□□□ 1.14
LIME1-206ENST00000487026 CD99P14209 185 aa22.18■■□□□ 1.14
LIME1-206ENST00000487026 SUCLG1P53597 346 aaKnown RBP22.18■■□□□ 1.14
LIME1-206ENST00000487026 SLC18A2Q05940 514 aa22.18■■□□□ 1.14
LIME1-206ENST00000487026 BCL2A1Q16548 175 aa22.18■■□□□ 1.14
LIME1-206ENST00000487026 CHMP1BQ7LBR1 199 aa22.18■■□□□ 1.14
LIME1-206ENST00000487026 P4HA3Q7Z4N8 544 aa22.18■■□□□ 1.14
LIME1-206ENST00000487026 EXOC3L1Q86VI1 746 aa22.18■■□□□ 1.14
LIME1-206ENST00000487026 EIF1ADQ8N9N8 165 aaKnown RBP22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms