RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 SERPINA13PQ6UXR4 307 aa10□□□□□ -0.81
CCDC171-208ENST00000486641 TPGS1Q6ZTW0 290 aa10□□□□□ -0.81
CCDC171-208ENST00000486641 FOXJ1Q92949 421 aa10□□□□□ -0.81
CCDC171-208ENST00000486641 CLP1Q92989 425 aaKnown RBP10□□□□□ -0.81
CCDC171-208ENST00000486641 KCTD12Q96CX2 325 aaKnown RBP10□□□□□ -0.81
CCDC171-208ENST00000486641 ART5Q96L15 291 aa10□□□□□ -0.81
CCDC171-208ENST00000486641 FNDC11Q9BVV2 318 aa10□□□□□ -0.81
CCDC171-208ENST00000486641 ACTR6Q9GZN1 396 aa10□□□□□ -0.81
CCDC171-208ENST00000486641 CTPS2Q9NRF8 586 aa10□□□□□ -0.81
CCDC171-208ENST00000486641 MAN2C1Q9NTJ4 1040 aa10□□□□□ -0.81
CCDC171-208ENST00000486641 CFAP97Q9P2B7 532 aa10□□□□□ -0.81
CCDC171-208ENST00000486641 NOD1Q9Y239 953 aa10□□□□□ -0.81
CCDC171-208ENST00000486641 TRPV2Q9Y5S1 764 aa10□□□□□ -0.81
CCDC171-208ENST00000486641 ARPC4-TTLL3A0A0A6YYG9 625 aa10□□□□□ -0.81
CCDC171-208ENST00000486641 A0A1W2PRQ8 180 aa10□□□□□ -0.81
CCDC171-208ENST00000486641 TRABD2BA6NFA1 517 aa10□□□□□ -0.81
CCDC171-208ENST00000486641 ANKDD1BA6NHY2 528 aa10□□□□□ -0.81
CCDC171-208ENST00000486641 TMEM88BA6NKF7 163 aa10□□□□□ -0.81
CCDC171-208ENST00000486641 PEX14O75381 377 aa10□□□□□ -0.81
CCDC171-208ENST00000486641 GJB5O95377 273 aa10□□□□□ -0.81
CCDC171-208ENST00000486641 CH25HO95992 272 aa10□□□□□ -0.81
CCDC171-208ENST00000486641 ACP5P13686 325 aa10□□□□□ -0.81
CCDC171-208ENST00000486641 GALP22466 123 aa10□□□□□ -0.81
CCDC171-208ENST00000486641 UQCRC2P22695 453 aa10□□□□□ -0.81
CCDC171-208ENST00000486641 HOXA1P49639 335 aaPredicted RBP10□□□□□ -0.81
CCDC171-208ENST00000486641 MMP15P51511 669 aa10□□□□□ -0.81
CCDC171-208ENST00000486641 SP140Q13342 867 aa10□□□□□ -0.81
CCDC171-208ENST00000486641 CAMK1Q14012 370 aa10□□□□□ -0.81
CCDC171-208ENST00000486641 NDUFA9Q16795 377 aa10□□□□□ -0.81
CCDC171-208ENST00000486641 SLC25A35Q3KQZ1 300 aa10□□□□□ -0.81
CCDC171-208ENST00000486641 CCSMST1Q4G0I0 132 aa10□□□□□ -0.81
CCDC171-208ENST00000486641 CLEC12AQ5QGZ9 265 aa10□□□□□ -0.81
CCDC171-208ENST00000486641 HIST2H2AA3Q6FI13 130 aa10□□□□□ -0.81
CCDC171-208ENST00000486641 FAM71E1Q6IPT2 247 aa10□□□□□ -0.81
CCDC171-208ENST00000486641 ZNF322Q6U7Q0 402 aaPredicted RBP10□□□□□ -0.81
CCDC171-208ENST00000486641 PRSS45Q7RTY3 260 aa10□□□□□ -0.81
CCDC171-208ENST00000486641 HSD17B13Q7Z5P4 300 aaPredicted RBP10□□□□□ -0.81
CCDC171-208ENST00000486641 ASPGQ86U10 573 aa10□□□□□ -0.81
CCDC171-208ENST00000486641 MORN4Q8NDC4 146 aa10□□□□□ -0.81
CCDC171-208ENST00000486641 OR51Q1Q8NH59 317 aa10□□□□□ -0.81
CCDC171-208ENST00000486641 SCARB1Q8WTV0 552 aa10□□□□□ -0.81
CCDC171-208ENST00000486641 MRPS24Q96EL2 167 aaKnown RBP10□□□□□ -0.81
CCDC171-208ENST00000486641 AHCYL2Q96HN2 611 aaKnown RBP10□□□□□ -0.81
CCDC171-208ENST00000486641 SLC6A16Q9GZN6 736 aa10□□□□□ -0.81
CCDC171-208ENST00000486641 GPBP1L1Q9HC44 474 aaPredicted RBP10□□□□□ -0.81
CCDC171-208ENST00000486641 A4GALTQ9NPC4 353 aa10□□□□□ -0.81
CCDC171-208ENST00000486641 FANCFQ9NPI8 374 aa10□□□□□ -0.81
CCDC171-208ENST00000486641 NPDC1Q9NQX5 325 aaPredicted RBP10□□□□□ -0.81
CCDC171-208ENST00000486641 CA10Q9NS85 328 aa10□□□□□ -0.81
CCDC171-208ENST00000486641 FAM8A1Q9UBU6 413 aa10□□□□□ -0.81
CCDC171-208ENST00000486641 PRKAB1Q9Y478 270 aa10□□□□□ -0.81
CCDC171-208ENST00000486641 PCDHGA9Q9Y5G4 932 aaKnown RBP10□□□□□ -0.81
CCDC171-208ENST00000486641 CEP350Q5VT06 3117 aa9.99□□□□□ -0.81
CCDC171-208ENST00000486641 TP53BP1Q12888 1972 aaPredicted RBP9.99□□□□□ -0.81
CCDC171-208ENST00000486641 OR6C65A6NJZ3 312 aa9.99□□□□□ -0.81
CCDC171-208ENST00000486641 CHURC1-FNTBB4DL54 471 aa9.99□□□□□ -0.81
CCDC171-208ENST00000486641 ANHXE9PGG2 379 aa9.99□□□□□ -0.81
CCDC171-208ENST00000486641 B3GALNT1O75752 331 aa9.99□□□□□ -0.81
CCDC171-208ENST00000486641 GATBO75879 557 aaKnown RBP9.99□□□□□ -0.81
CCDC171-208ENST00000486641 TGFB1P01137 390 aa9.99□□□□□ -0.81
CCDC171-208ENST00000486641 RNF144AP50876 292 aaPredicted RBP9.99□□□□□ -0.81
CCDC171-208ENST00000486641 E2F1Q01094 437 aa9.99□□□□□ -0.81
CCDC171-208ENST00000486641 AGTRAPQ6RW13 159 aa9.99□□□□□ -0.81
CCDC171-208ENST00000486641 IKBIPQ70UQ0 350 aa9.99□□□□□ -0.81
CCDC171-208ENST00000486641 MRGPREQ86SM8 312 aa9.99□□□□□ -0.81
CCDC171-208ENST00000486641 ZNF280BQ86YH2 543 aa9.99□□□□□ -0.81
CCDC171-208ENST00000486641 LRRC56Q8IYG6 542 aaPredicted RBP9.99□□□□□ -0.81
CCDC171-208ENST00000486641 CBARPQ8N350 705 aaPredicted RBP9.99□□□□□ -0.81
CCDC171-208ENST00000486641 ZNF454Q8N9F8 522 aa9.99□□□□□ -0.81
CCDC171-208ENST00000486641 KCT2Q8NC54 265 aa9.99□□□□□ -0.81
CCDC171-208ENST00000486641 OR11G2Q8NGC1 345 aa9.99□□□□□ -0.81
CCDC171-208ENST00000486641 OR52N1Q8NH53 320 aa9.99□□□□□ -0.81
CCDC171-208ENST00000486641 OR1S1Q8NH92 325 aa9.99□□□□□ -0.81
CCDC171-208ENST00000486641 TEX47Q8TBZ9 253 aa9.99□□□□□ -0.81
CCDC171-208ENST00000486641 UROC1Q96N76 676 aa9.99□□□□□ -0.81
CCDC171-208ENST00000486641 PARK7Q99497 189 aaKnown RBP9.99□□□□□ -0.81
CCDC171-208ENST00000486641 SEPT5Q99719 369 aaPredicted RBP9.99□□□□□ -0.81
CCDC171-208ENST00000486641 FAIM2Q9BWQ8 316 aa9.99□□□□□ -0.81
CCDC171-208ENST00000486641 OR51B5Q9H339 312 aa9.99□□□□□ -0.81
CCDC171-208ENST00000486641 WDR26Q9H7D7 661 aa9.99□□□□□ -0.81
CCDC171-208ENST00000486641 GKN1Q9NS71 199 aa9.99□□□□□ -0.81
CCDC171-208ENST00000486641 MRPL15Q9P015 296 aaKnown RBP9.99□□□□□ -0.81
CCDC171-208ENST00000486641 MGAT4CQ9UBM8 478 aa9.99□□□□□ -0.81
CCDC171-208ENST00000486641 SEC14L3Q9UDX4 400 aa9.99□□□□□ -0.81
CCDC171-208ENST00000486641 EXOGQ9Y2C4 368 aaKnown RBP9.99□□□□□ -0.81
CCDC171-208ENST00000486641 A0A0G2JK05 382 aa9.99□□□□□ -0.81
CCDC171-208ENST00000486641 NPIPB15A6NHN6 443 aaPredicted RBP9.99□□□□□ -0.81
CCDC171-208ENST00000486641 ARHGEF33A8MVX0 844 aa9.99□□□□□ -0.81
CCDC171-208ENST00000486641 MID1O15344 667 aa9.99□□□□□ -0.81
CCDC171-208ENST00000486641 KDM4BO94953 1096 aa9.99□□□□□ -0.81
CCDC171-208ENST00000486641 TGM6O95932 706 aa9.99□□□□□ -0.81
CCDC171-208ENST00000486641 KLK1P06870 262 aa9.99□□□□□ -0.81
CCDC171-208ENST00000486641 ZDHHC11BP0C7U3 371 aa9.99□□□□□ -0.81
CCDC171-208ENST00000486641 GJA1P17302 382 aa9.99□□□□□ -0.81
CCDC171-208ENST00000486641 CALCRP30988 508 aa9.99□□□□□ -0.81
CCDC171-208ENST00000486641 ATP5C1P36542 298 aaKnown RBP9.99□□□□□ -0.81
CCDC171-208ENST00000486641 MAPK9P45984 424 aa9.99□□□□□ -0.81
CCDC171-208ENST00000486641 MAZP56270 477 aaKnown RBP9.99□□□□□ -0.81
CCDC171-208ENST00000486641 SHC2P98077 582 aa9.99□□□□□ -0.81
CCDC171-208ENST00000486641 MLLT1Q03111 559 aaPredicted RBP9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms