RNA–Protein interactions for RNA: ENST00000486016.1

GCFC2-209, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 3

Gene GCFC2, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-209ENST00000486016 ALDH3B2P48448 385 aa2.16□□□□□ -2.06
GCFC2-209ENST00000486016 SSTP61278 116 aa2.16□□□□□ -2.06
GCFC2-209ENST00000486016 RPS4XP62701 263 aaKnown RBP2.16□□□□□ -2.06
GCFC2-209ENST00000486016 CDKL1Q00532 357 aa2.16□□□□□ -2.06
GCFC2-209ENST00000486016 HERPUD1Q15011 391 aa2.16□□□□□ -2.06
GCFC2-209ENST00000486016 KYAT1Q16773 422 aa2.16□□□□□ -2.06
GCFC2-209ENST00000486016 DDI2Q5TDH0 399 aa2.16□□□□□ -2.06
GCFC2-209ENST00000486016 OR6B2Q6IFH4 312 aa2.16□□□□□ -2.06
GCFC2-209ENST00000486016 STEAP1BQ6NZ63 245 aa2.16□□□□□ -2.06
GCFC2-209ENST00000486016 NEK5Q6P3R8 708 aa2.16□□□□□ -2.06
GCFC2-209ENST00000486016 CNSTQ6PJW8 725 aa2.16□□□□□ -2.06
GCFC2-209ENST00000486016 MFSD7Q6UXD7 560 aa2.16□□□□□ -2.06
GCFC2-209ENST00000486016 TFAP2EQ6VUC0 442 aa2.16□□□□□ -2.06
GCFC2-209ENST00000486016 ADAMTSL5Q6ZMM2 481 aa2.16□□□□□ -2.06
GCFC2-209ENST00000486016 WDR88Q6ZMY6 472 aa2.16□□□□□ -2.06
GCFC2-209ENST00000486016 SYVN1Q86TM6 617 aa2.16□□□□□ -2.06
GCFC2-209ENST00000486016 HIST2H2ABQ8IUE6 130 aaPredicted RBP2.16□□□□□ -2.06
GCFC2-209ENST00000486016 LINC00518Q8N0U6 118 aa2.16□□□□□ -2.06
GCFC2-209ENST00000486016 LEMD2Q8NC56 503 aa2.16□□□□□ -2.06
GCFC2-209ENST00000486016 RDH11Q8TC12 318 aa2.16□□□□□ -2.06
GCFC2-209ENST00000486016 HIST1H2ACQ93077 130 aa2.16□□□□□ -2.06
GCFC2-209ENST00000486016 TMEM186Q96B77 213 aa2.16□□□□□ -2.06
GCFC2-209ENST00000486016 STARD4Q96DR4 205 aa2.16□□□□□ -2.06
GCFC2-209ENST00000486016 SLC25A38Q96DW6 304 aa2.16□□□□□ -2.06
GCFC2-209ENST00000486016 COQ7Q99807 217 aa2.16□□□□□ -2.06
GCFC2-209ENST00000486016 FAM173AQ9BQD7 235 aa2.16□□□□□ -2.06
GCFC2-209ENST00000486016 ERVK-18Q9QC07 812 aa2.16□□□□□ -2.06
GCFC2-209ENST00000486016 FLVCR1Q9Y5Y0 555 aa2.16□□□□□ -2.06
GCFC2-209ENST00000486016 CFAP73A6NFT4 308 aa2.15□□□□□ -2.07
GCFC2-209ENST00000486016 ARHGAP42A6NI28 874 aa2.15□□□□□ -2.07
GCFC2-209ENST00000486016 APRTP07741 180 aa2.15□□□□□ -2.07
GCFC2-209ENST00000486016 ALPIP09923 528 aa2.15□□□□□ -2.07
GCFC2-209ENST00000486016 CCDC192P0DO97 292 aa2.15□□□□□ -2.07
GCFC2-209ENST00000486016 ETS1P14921 441 aa2.15□□□□□ -2.07
GCFC2-209ENST00000486016 GNSP15586 552 aa2.15□□□□□ -2.07
GCFC2-209ENST00000486016 GAP43P17677 238 aa2.15□□□□□ -2.07
GCFC2-209ENST00000486016 AKT2P31751 481 aa2.15□□□□□ -2.07
GCFC2-209ENST00000486016 TRIM23P36406 574 aa2.15□□□□□ -2.07
GCFC2-209ENST00000486016 NPY2RP49146 381 aa2.15□□□□□ -2.07
GCFC2-209ENST00000486016 GAMTQ14353 236 aa2.15□□□□□ -2.07
GCFC2-209ENST00000486016 CD226Q15762 336 aa2.15□□□□□ -2.07
GCFC2-209ENST00000486016 CARTPTQ16568 116 aa2.15□□□□□ -2.07
GCFC2-209ENST00000486016 CLPPQ16740 277 aaPredicted RBP2.15□□□□□ -2.07
GCFC2-209ENST00000486016 ZNF528Q3MIS6 628 aa2.15□□□□□ -2.07
GCFC2-209ENST00000486016 GLYR1Q49A26 553 aaPredicted RBP2.15□□□□□ -2.07
GCFC2-209ENST00000486016 CCDC40Q4G0X9 1142 aa2.15□□□□□ -2.07
GCFC2-209ENST00000486016 PARP10Q53GL7 1025 aa2.15□□□□□ -2.07
GCFC2-209ENST00000486016 ASRGL1Q7L266 308 aa2.15□□□□□ -2.07
GCFC2-209ENST00000486016 GPR142Q7Z601 462 aa2.15□□□□□ -2.07
GCFC2-209ENST00000486016 TAF8Q7Z7C8 310 aa2.15□□□□□ -2.07
GCFC2-209ENST00000486016 YRDCQ86U90 279 aaKnown RBP2.15□□□□□ -2.07
GCFC2-209ENST00000486016 ELMOD2Q8IZ81 293 aa2.15□□□□□ -2.07
GCFC2-209ENST00000486016 MRPL43Q8N983 215 aaKnown RBP2.15□□□□□ -2.07
GCFC2-209ENST00000486016 TMEM45BQ96B21 275 aa2.15□□□□□ -2.07
GCFC2-209ENST00000486016 NSMCE2Q96MF7 247 aa2.15□□□□□ -2.07
GCFC2-209ENST00000486016 ACCSQ96QU6 501 aa2.15□□□□□ -2.07
GCFC2-209ENST00000486016 CBWD1Q9BRT8 395 aa2.15□□□□□ -2.07
GCFC2-209ENST00000486016 FTHL17Q9BXU8 183 aa2.15□□□□□ -2.07
GCFC2-209ENST00000486016 EHD1Q9H4M9 534 aa2.15□□□□□ -2.07
GCFC2-209ENST00000486016 DCTPP1Q9H773 170 aa2.15□□□□□ -2.07
GCFC2-209ENST00000486016 HOMER3Q9NSC5 361 aa2.15□□□□□ -2.07
GCFC2-209ENST00000486016 NINJ2Q9NZG7 142 aa2.15□□□□□ -2.07
GCFC2-209ENST00000486016 SPASTQ9UBP0 616 aa2.15□□□□□ -2.07
GCFC2-209ENST00000486016 EMCNQ9ULC0 261 aa2.15□□□□□ -2.07
GCFC2-209ENST00000486016 ENTPD4Q9Y227 616 aa2.15□□□□□ -2.07
GCFC2-209ENST00000486016 PDE10AQ9Y233 779 aa2.15□□□□□ -2.07
GCFC2-209ENST00000486016 NUDCQ9Y266 331 aa2.15□□□□□ -2.07
GCFC2-209ENST00000486016 KLHDC2Q9Y2U9 406 aa2.15□□□□□ -2.07
GCFC2-209ENST00000486016 PTPRUQ92729 1446 aa2.15□□□□□ -2.07
GCFC2-209ENST00000486016 ZMYM6O95789 1325 aa2.15□□□□□ -2.07
GCFC2-209ENST00000486016 RAD54L2Q9Y4B4 1467 aa2.14□□□□□ -2.07
GCFC2-209ENST00000486016 RNF103-CHMP3A0A140T963 221 aa2.14□□□□□ -2.07
GCFC2-209ENST00000486016 KRT87PA6NCN2 255 aa2.14□□□□□ -2.07
GCFC2-209ENST00000486016 ARPC1BO15143 372 aaKnown RBP2.14□□□□□ -2.07
GCFC2-209ENST00000486016 ADAM12O43184 909 aa2.14□□□□□ -2.07
GCFC2-209ENST00000486016 TYROBPO43914 113 aa2.14□□□□□ -2.07
GCFC2-209ENST00000486016 MT-ATP6P00846 226 aa2.14□□□□□ -2.07
GCFC2-209ENST00000486016 ZCCHC18P0CG32 403 aa2.14□□□□□ -2.07
GCFC2-209ENST00000486016 IGHV1-2P23083 117 aa2.14□□□□□ -2.07
GCFC2-209ENST00000486016 PRDX6P30041 224 aa2.14□□□□□ -2.07
GCFC2-209ENST00000486016 MAT2AP31153 395 aaKnown RBP2.14□□□□□ -2.07
GCFC2-209ENST00000486016 RABIFP47224 123 aa2.14□□□□□ -2.07
GCFC2-209ENST00000486016 SLC7A2P52569 658 aa2.14□□□□□ -2.07
GCFC2-209ENST00000486016 ATXN3P54252 364 aaPredicted RBP2.14□□□□□ -2.07
GCFC2-209ENST00000486016 IL1RL1Q01638 556 aa2.14□□□□□ -2.07
GCFC2-209ENST00000486016 BTG3Q14201 252 aaPredicted RBP2.14□□□□□ -2.07
GCFC2-209ENST00000486016 HAGHQ16775 308 aa2.14□□□□□ -2.07
GCFC2-209ENST00000486016 HKDC1Q2TB90 917 aa2.14□□□□□ -2.07
GCFC2-209ENST00000486016 TCHHL1Q5QJ38 904 aaPredicted RBP2.14□□□□□ -2.07
GCFC2-209ENST00000486016 LIPKQ5VXJ0 399 aa2.14□□□□□ -2.07
GCFC2-209ENST00000486016 HDDC3Q8N4P3 179 aa2.14□□□□□ -2.07
GCFC2-209ENST00000486016 LRRC17Q8N6Y2 441 aa2.14□□□□□ -2.07
GCFC2-209ENST00000486016 COLGALT1Q8NBJ5 622 aa2.14□□□□□ -2.07
GCFC2-209ENST00000486016 TMEM37Q8WXS4 190 aa2.14□□□□□ -2.07
GCFC2-209ENST00000486016 PHYHIPQ92561 330 aa2.14□□□□□ -2.07
GCFC2-209ENST00000486016 DEFB118Q96PH6 123 aa2.14□□□□□ -2.07
GCFC2-209ENST00000486016 NLNQ9BYT8 704 aa2.14□□□□□ -2.07
GCFC2-209ENST00000486016 ELOVL4Q9GZR5 314 aa2.14□□□□□ -2.07
GCFC2-209ENST00000486016 OPN3Q9H1Y3 402 aaPredicted RBP2.14□□□□□ -2.07
GCFC2-209ENST00000486016 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms