RNA–Protein interactions for RNA: ENST00000484799.1

SMC4-215, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-215ENST00000484799 OR4F21O95013 312 aa3.03□□□□□ -1.92
SMC4-215ENST00000484799 IGHDP01880 384 aa3.03□□□□□ -1.92
SMC4-215ENST00000484799 OPN1MWP04001 364 aa3.03□□□□□ -1.92
SMC4-215ENST00000484799 CA3P07451 260 aa3.03□□□□□ -1.92
SMC4-215ENST00000484799 ASNSP08243 561 aa3.03□□□□□ -1.92
SMC4-215ENST00000484799 OPN1MW2P0DN77 364 aa3.03□□□□□ -1.92
SMC4-215ENST00000484799 OPN1MW3P0DN78 364 aa3.03□□□□□ -1.92
SMC4-215ENST00000484799 EPB41P11171 864 aaKnown RBP3.03□□□□□ -1.92
SMC4-215ENST00000484799 ZNF19P17023 458 aa3.03□□□□□ -1.92
SMC4-215ENST00000484799 HNRNPA2B1P22626 353 aaKnown RBP3.03□□□□□ -1.92
SMC4-215ENST00000484799 PSMA2P25787 234 aa3.03□□□□□ -1.92
SMC4-215ENST00000484799 MAT2AP31153 395 aaKnown RBP3.03□□□□□ -1.92
SMC4-215ENST00000484799 RGRP47804 291 aa3.03□□□□□ -1.92
SMC4-215ENST00000484799 NAAAQ02083 359 aa3.03□□□□□ -1.92
SMC4-215ENST00000484799 SLC17A1Q14916 467 aa3.03□□□□□ -1.92
SMC4-215ENST00000484799 CNPY1Q3B7I2 92 aa3.03□□□□□ -1.92
SMC4-215ENST00000484799 ANKRD55Q3KP44 614 aa3.03□□□□□ -1.92
SMC4-215ENST00000484799 NADK2Q4G0N4 442 aa3.03□□□□□ -1.92
SMC4-215ENST00000484799 WASH2PQ6VEQ5 465 aa3.03□□□□□ -1.92
SMC4-215ENST00000484799 SLC5A11Q8WWX8 675 aa3.03□□□□□ -1.92
SMC4-215ENST00000484799 RLN3Q8WXF3 142 aa3.03□□□□□ -1.92
SMC4-215ENST00000484799 N4BP2L2Q92802 583 aaPredicted RBP3.03□□□□□ -1.92
SMC4-215ENST00000484799 SLC25A36Q96CQ1 311 aa3.03□□□□□ -1.92
SMC4-215ENST00000484799 VSTM2LQ96N03 204 aa3.03□□□□□ -1.92
SMC4-215ENST00000484799 CPXM1Q96SM3 734 aa3.03□□□□□ -1.92
SMC4-215ENST00000484799 ERP44Q9BS26 406 aa3.03□□□□□ -1.92
SMC4-215ENST00000484799 NLNQ9BYT8 704 aa3.03□□□□□ -1.92
SMC4-215ENST00000484799 RMND5AQ9H871 391 aa3.03□□□□□ -1.92
SMC4-215ENST00000484799 SLC25A19Q9HC21 320 aa3.03□□□□□ -1.92
SMC4-215ENST00000484799 TRPV5Q9NQA5 729 aa3.03□□□□□ -1.92
SMC4-215ENST00000484799 STARD5Q9NSY2 213 aa3.03□□□□□ -1.92
SMC4-215ENST00000484799 KLRF1Q9NZS2 232 aa3.03□□□□□ -1.92
SMC4-215ENST00000484799 C6orf203Q9P0P8 240 aaPredicted RBP3.03□□□□□ -1.92
SMC4-215ENST00000484799 COX16Q9P0S2 106 aa3.03□□□□□ -1.92
SMC4-215ENST00000484799 FZR1Q9UM11 496 aa3.03□□□□□ -1.92
SMC4-215ENST00000484799 NIP7Q9Y221 180 aaKnown RBP eCLIP3.03□□□□□ -1.92
SMC4-215ENST00000484799 SLC9A8Q9Y2E8 581 aa3.03□□□□□ -1.92
SMC4-215ENST00000484799 FKBP7Q9Y680 259 aa3.03□□□□□ -1.92
SMC4-215ENST00000484799 SF3B1O75533 1304 aaKnown RBP eCLIP3.02□□□□□ -1.93
SMC4-215ENST00000484799 A0A0A6YYD4 124 aa3.02□□□□□ -1.93
SMC4-215ENST00000484799 RNF222A6NCQ9 220 aa3.02□□□□□ -1.93
SMC4-215ENST00000484799 A8MUI8 341 aa3.02□□□□□ -1.93
SMC4-215ENST00000484799 NPIPA2E9PIF3 369 aa3.02□□□□□ -1.93
SMC4-215ENST00000484799 NEDD8-MDP1E9PL57 170 aa3.02□□□□□ -1.93
SMC4-215ENST00000484799 CYB561D2O14569 222 aa3.02□□□□□ -1.93
SMC4-215ENST00000484799 EI24O14681 340 aa3.02□□□□□ -1.93
SMC4-215ENST00000484799 LANCL1O43813 399 aa3.02□□□□□ -1.93
SMC4-215ENST00000484799 SDC3O75056 442 aa3.02□□□□□ -1.93
SMC4-215ENST00000484799 SPAG6O75602 509 aa3.02□□□□□ -1.93
SMC4-215ENST00000484799 KBTBD11O94819 623 aa3.02□□□□□ -1.93
SMC4-215ENST00000484799 ANP32DO95626 131 aa3.02□□□□□ -1.93
SMC4-215ENST00000484799 PIGRP01833 764 aa3.02□□□□□ -1.93
SMC4-215ENST00000484799 ANXA4P09525 319 aaPredicted RBP3.02□□□□□ -1.93
SMC4-215ENST00000484799 ZCCHC18P0CG32 403 aa3.02□□□□□ -1.93
SMC4-215ENST00000484799 UQCRBP14927 111 aa3.02□□□□□ -1.93
SMC4-215ENST00000484799 TRIM23P36406 574 aa3.02□□□□□ -1.93
SMC4-215ENST00000484799 PTGFRP43088 359 aa3.02□□□□□ -1.93
SMC4-215ENST00000484799 MTIF2P46199 727 aaKnown RBP3.02□□□□□ -1.93
SMC4-215ENST00000484799 SLC1A6P48664 564 aa3.02□□□□□ -1.93
SMC4-215ENST00000484799 SGSHP51688 502 aa3.02□□□□□ -1.93
SMC4-215ENST00000484799 GBX2P52951 348 aaPredicted RBP3.02□□□□□ -1.93
SMC4-215ENST00000484799 ARFIP1P53367 373 aa3.02□□□□□ -1.93
SMC4-215ENST00000484799 IST1P53990 364 aa3.02□□□□□ -1.93
SMC4-215ENST00000484799 NOP14P78316 857 aaKnown RBP3.02□□□□□ -1.93
SMC4-215ENST00000484799 HMGN5P82970 282 aaKnown RBP3.02□□□□□ -1.93
SMC4-215ENST00000484799 SPIBQ01892 262 aa3.02□□□□□ -1.93
SMC4-215ENST00000484799 SRYQ05066 204 aa3.02□□□□□ -1.93
SMC4-215ENST00000484799 SNTB2Q13425 540 aaKnown RBP3.02□□□□□ -1.93
SMC4-215ENST00000484799 VWA2Q5GFL6 755 aa3.02□□□□□ -1.93
SMC4-215ENST00000484799 CFAP157Q5JU67 520 aa3.02□□□□□ -1.93
SMC4-215ENST00000484799 DCAF12Q5T6F0 453 aa3.02□□□□□ -1.93
SMC4-215ENST00000484799 NCR3LG1Q68D85 454 aa3.02□□□□□ -1.93
SMC4-215ENST00000484799 REP15Q6BDI9 236 aa3.02□□□□□ -1.93
SMC4-215ENST00000484799 SULT1C3Q6IMI6 304 aa3.02□□□□□ -1.93
SMC4-215ENST00000484799 NEPROQ6NW34 567 aa3.02□□□□□ -1.93
SMC4-215ENST00000484799 LEG1Q6P5S2 330 aa3.02□□□□□ -1.93
SMC4-215ENST00000484799 SLC39A4Q6P5W5 647 aa3.02□□□□□ -1.93
SMC4-215ENST00000484799 CBLN3Q6UW01 205 aa3.02□□□□□ -1.93
SMC4-215ENST00000484799 RGS9BPQ6ZS82 235 aa3.02□□□□□ -1.93
SMC4-215ENST00000484799 NET1Q7Z628 596 aaPredicted RBP3.02□□□□□ -1.93
SMC4-215ENST00000484799 ZDHHC21Q8IVQ6 265 aa3.02□□□□□ -1.93
SMC4-215ENST00000484799 MCHR2Q969V1 340 aa3.02□□□□□ -1.93
SMC4-215ENST00000484799 PPP1R16AQ96I34 528 aa3.02□□□□□ -1.93
SMC4-215ENST00000484799 SDHCQ99643 169 aaPredicted RBP3.02□□□□□ -1.93
SMC4-215ENST00000484799 HSD17B14Q9BPX1 270 aa3.02□□□□□ -1.93
SMC4-215ENST00000484799 MAPKAP1Q9BPZ7 522 aa3.02□□□□□ -1.93
SMC4-215ENST00000484799 RAB33BQ9H082 229 aa3.02□□□□□ -1.93
SMC4-215ENST00000484799 Q9HAA7 133 aa3.02□□□□□ -1.93
SMC4-215ENST00000484799 GDAP2Q9NXN4 497 aa3.02□□□□□ -1.93
SMC4-215ENST00000484799 PURGQ9UJV8 347 aaKnown RBP3.02□□□□□ -1.93
SMC4-215ENST00000484799 RNF6Q9Y252 685 aa3.02□□□□□ -1.93
SMC4-215ENST00000484799 KLHDC2Q9Y2U9 406 aa3.02□□□□□ -1.93
SMC4-215ENST00000484799 DHRS7Q9Y394 339 aa3.02□□□□□ -1.93
SMC4-215ENST00000484799 COL16A1Q07092 1604 aaPredicted RBP3.01□□□□□ -1.93
SMC4-215ENST00000484799 FBLL1A6NHQ2 334 aaKnown RBP3.01□□□□□ -1.93
SMC4-215ENST00000484799 WASHC1A8K0Z3 465 aa3.01□□□□□ -1.93
SMC4-215ENST00000484799 RNF212BA8MTL3 300 aa3.01□□□□□ -1.93
SMC4-215ENST00000484799 CLDN5O00501 218 aa3.01□□□□□ -1.93
SMC4-215ENST00000484799 ALOX15BO15296 676 aa3.01□□□□□ -1.93
SMC4-215ENST00000484799 LRRTM2O43300 516 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms