RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 SCO2O43819 266 aa11.53□□□□□ -0.56
UBR4-213ENST00000483922 CD5LO43866 347 aa11.53□□□□□ -0.56
UBR4-213ENST00000483922 ABCB7O75027 752 aa11.53□□□□□ -0.56
UBR4-213ENST00000483922 KLHL2O95198 593 aa11.53□□□□□ -0.56
UBR4-213ENST00000483922 NTN1O95631 604 aa11.53□□□□□ -0.56
UBR4-213ENST00000483922 IGHV4-39P01824 125 aa11.53□□□□□ -0.56
UBR4-213ENST00000483922 ALDOAP04075 364 aaKnown RBP11.53□□□□□ -0.56
UBR4-213ENST00000483922 TCP1P17987 556 aaKnown RBP11.53□□□□□ -0.56
UBR4-213ENST00000483922 TSPAN8P19075 237 aa11.53□□□□□ -0.56
UBR4-213ENST00000483922 EVI2BP34910 448 aa11.53□□□□□ -0.56
UBR4-213ENST00000483922 CDKN1AP38936 164 aa11.53□□□□□ -0.56
UBR4-213ENST00000483922 RAE1P78406 368 aaKnown RBP11.53□□□□□ -0.56
UBR4-213ENST00000483922 PSG6Q00889 435 aa11.53□□□□□ -0.56
UBR4-213ENST00000483922 GUCY2DQ02846 1103 aa11.53□□□□□ -0.56
UBR4-213ENST00000483922 VEZF1Q14119 521 aa11.53□□□□□ -0.56
UBR4-213ENST00000483922 TECRLQ5HYJ1 363 aa11.53□□□□□ -0.56
UBR4-213ENST00000483922 C6orf163Q5TEZ5 329 aa11.53□□□□□ -0.56
UBR4-213ENST00000483922 MROH9Q5TGP6 573 aa11.53□□□□□ -0.56
UBR4-213ENST00000483922 RAET1LQ5VY80 246 aa11.53□□□□□ -0.56
UBR4-213ENST00000483922 MFSD12Q6NUT3 480 aa11.53□□□□□ -0.56
UBR4-213ENST00000483922 CHMP1BQ7LBR1 199 aa11.53□□□□□ -0.56
UBR4-213ENST00000483922 WFDC8Q8IUA0 241 aa11.53□□□□□ -0.56
UBR4-213ENST00000483922 PTGR2Q8N8N7 351 aaPredicted RBP11.53□□□□□ -0.56
UBR4-213ENST00000483922 OR7G2Q8NG99 324 aa11.53□□□□□ -0.56
UBR4-213ENST00000483922 OR4F6Q8NGB9 312 aa11.53□□□□□ -0.56
UBR4-213ENST00000483922 OR4K17Q8NGC6 315 aa11.53□□□□□ -0.56
UBR4-213ENST00000483922 HBEGFQ99075 208 aa11.53□□□□□ -0.56
UBR4-213ENST00000483922 KLHDC3Q9BQ90 382 aa11.53□□□□□ -0.56
UBR4-213ENST00000483922 SLCO5A1Q9H2Y9 848 aa11.53□□□□□ -0.56
UBR4-213ENST00000483922 CXorf56Q9H5V9 222 aa11.53□□□□□ -0.56
UBR4-213ENST00000483922 PCTPQ9UKL6 214 aa11.53□□□□□ -0.56
UBR4-213ENST00000483922 SLC12A4Q9UP95 1085 aa11.53□□□□□ -0.56
UBR4-213ENST00000483922 EIF3HO15372 352 aaKnown RBP eCLIP11.52□□□□□ -0.57
UBR4-213ENST00000483922 PHF1O43189 567 aaPredicted RBP11.52□□□□□ -0.57
UBR4-213ENST00000483922 TMCC2O75069 709 aa11.52□□□□□ -0.57
UBR4-213ENST00000483922 SS18L1O75177 396 aaPredicted RBP11.52□□□□□ -0.57
UBR4-213ENST00000483922 CD8AP01732 235 aa11.52□□□□□ -0.57
UBR4-213ENST00000483922 OPN1LWP04000 364 aa11.52□□□□□ -0.57
UBR4-213ENST00000483922 CHN1P15882 459 aa11.52□□□□□ -0.57
UBR4-213ENST00000483922 ALDH9A1P49189 494 aa11.52□□□□□ -0.57
UBR4-213ENST00000483922 EFR3AQ14156 821 aa11.52□□□□□ -0.57
UBR4-213ENST00000483922 TSC22D1Q15714 1073 aa11.52□□□□□ -0.57
UBR4-213ENST00000483922 FAM83EQ2M2I3 478 aa11.52□□□□□ -0.57
UBR4-213ENST00000483922 TCHHL1Q5QJ38 904 aaPredicted RBP11.52□□□□□ -0.57
UBR4-213ENST00000483922 ADAM5Q6NVV9 412 aa11.52□□□□□ -0.57
UBR4-213ENST00000483922 LETMD1Q6P1Q0 360 aa11.52□□□□□ -0.57
UBR4-213ENST00000483922 SEZ6L2Q6UXD5 910 aa11.52□□□□□ -0.57
UBR4-213ENST00000483922 PAGE2Q7Z2X7 111 aa11.52□□□□□ -0.57
UBR4-213ENST00000483922 MARCH3Q86UD3 253 aa11.52□□□□□ -0.57
UBR4-213ENST00000483922 SLC44A2Q8IWA5 706 aaPredicted RBP11.52□□□□□ -0.57
UBR4-213ENST00000483922 C1orf52Q8N6N3 182 aaKnown RBP11.52□□□□□ -0.57
UBR4-213ENST00000483922 UHMK1Q8TAS1 419 aaKnown RBP11.52□□□□□ -0.57
UBR4-213ENST00000483922 PHF21BQ96EK2 531 aa11.52□□□□□ -0.57
UBR4-213ENST00000483922 C1GALT1C1Q96EU7 318 aa11.52□□□□□ -0.57
UBR4-213ENST00000483922 ADGRG7Q96K78 797 aa11.52□□□□□ -0.57
UBR4-213ENST00000483922 ERP44Q9BS26 406 aa11.52□□□□□ -0.57
UBR4-213ENST00000483922 ACTR6Q9GZN1 396 aa11.52□□□□□ -0.57
UBR4-213ENST00000483922 AHSPQ9NZD4 102 aa11.52□□□□□ -0.57
UBR4-213ENST00000483922 PPP4R1LQ9P1A2 415 aa11.52□□□□□ -0.57
UBR4-213ENST00000483922 WHRNQ9P202 907 aa11.52□□□□□ -0.57
UBR4-213ENST00000483922 RNF14Q9UBS8 474 aa11.52□□□□□ -0.57
UBR4-213ENST00000483922 GDF2Q9UK05 429 aaPredicted RBP11.52□□□□□ -0.57
UBR4-213ENST00000483922 UTS2RQ9UKP6 389 aa11.52□□□□□ -0.57
UBR4-213ENST00000483922 TNPO3Q9Y5L0 923 aaKnown RBP11.52□□□□□ -0.57
UBR4-213ENST00000483922 MAGED1Q9Y5V3 778 aaPredicted RBP11.52□□□□□ -0.57
UBR4-213ENST00000483922 A0A096LPK6 155 aa11.51□□□□□ -0.57
UBR4-213ENST00000483922 TLX2O43763 284 aaPredicted RBP11.51□□□□□ -0.57
UBR4-213ENST00000483922 ADAM11O75078 769 aa11.51□□□□□ -0.57
UBR4-213ENST00000483922 GSTA2P09210 222 aa11.51□□□□□ -0.57
UBR4-213ENST00000483922 SBK3P0C264 359 aa11.51□□□□□ -0.57
UBR4-213ENST00000483922 CCNG1P51959 295 aa11.51□□□□□ -0.57
UBR4-213ENST00000483922 EEFSECP57772 596 aaKnown RBP11.51□□□□□ -0.57
UBR4-213ENST00000483922 RPS4XP62701 263 aaKnown RBP11.51□□□□□ -0.57
UBR4-213ENST00000483922 OCRLQ01968 901 aa11.51□□□□□ -0.57
UBR4-213ENST00000483922 STX5Q13190 355 aa11.51□□□□□ -0.57
UBR4-213ENST00000483922 PGGHGQ32M88 737 aa11.51□□□□□ -0.57
UBR4-213ENST00000483922 KRTAP24-1Q3LI83 254 aa11.51□□□□□ -0.57
UBR4-213ENST00000483922 TTC19Q6DKK2 380 aaPredicted RBP11.51□□□□□ -0.57
UBR4-213ENST00000483922 METTL2BQ6P1Q9 378 aaKnown RBP11.51□□□□□ -0.57
UBR4-213ENST00000483922 GBP7Q8N8V2 638 aaPredicted RBP11.51□□□□□ -0.57
UBR4-213ENST00000483922 OR6K3Q8NGY3 331 aa11.51□□□□□ -0.57
UBR4-213ENST00000483922 TMEM158Q8WZ71 300 aa11.51□□□□□ -0.57
UBR4-213ENST00000483922 ATP6V1E2Q96A05 226 aa11.51□□□□□ -0.57
UBR4-213ENST00000483922 MRRFQ96E11 262 aaKnown RBP11.51□□□□□ -0.57
UBR4-213ENST00000483922 PSME2Q9UL46 239 aa11.51□□□□□ -0.57
UBR4-213ENST00000483922 LIPT1Q9Y234 373 aa11.51□□□□□ -0.57
UBR4-213ENST00000483922 ZNF780BQ9Y6R6 833 aa11.51□□□□□ -0.57
UBR4-213ENST00000483922 GMFGO60234 142 aa11.5□□□□□ -0.57
UBR4-213ENST00000483922 PLOD3O60568 738 aa11.5□□□□□ -0.57
UBR4-213ENST00000483922 GCM2O75603 506 aaPredicted RBP11.5□□□□□ -0.57
UBR4-213ENST00000483922 F12P00748 615 aaPredicted RBP11.5□□□□□ -0.57
UBR4-213ENST00000483922 C8BP07358 591 aa11.5□□□□□ -0.57
UBR4-213ENST00000483922 IL3P08700 152 aa11.5□□□□□ -0.57
UBR4-213ENST00000483922 PPP3CBP16298 524 aa11.5□□□□□ -0.57
UBR4-213ENST00000483922 PSMA4P25789 261 aaKnown RBP11.5□□□□□ -0.57
UBR4-213ENST00000483922 IL12BP29460 328 aa11.5□□□□□ -0.57
UBR4-213ENST00000483922 IDUAP35475 653 aa11.5□□□□□ -0.57
UBR4-213ENST00000483922 MAGEA4P43358 317 aa11.5□□□□□ -0.57
UBR4-213ENST00000483922 CDH13P55290 713 aa11.5□□□□□ -0.57
UBR4-213ENST00000483922 SRSF2Q01130 221 aaKnown RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms