RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 SPATA6LQ8N4H0 392 aa5.36□□□□□ -1.55
CSDE1-207ENST00000483407 NAXEQ8NCW5 288 aa5.36□□□□□ -1.55
CSDE1-207ENST00000483407 OR7G3Q8NG95 312 aa5.36□□□□□ -1.55
CSDE1-207ENST00000483407 STAG3L4Q8TBR4 150 aa5.36□□□□□ -1.55
CSDE1-207ENST00000483407 PYROXD1Q8WU10 500 aa5.36□□□□□ -1.55
CSDE1-207ENST00000483407 RIT1Q92963 219 aa5.36□□□□□ -1.55
CSDE1-207ENST00000483407 EXT2Q93063 718 aa5.36□□□□□ -1.55
CSDE1-207ENST00000483407 REPS1Q96D71 796 aa5.36□□□□□ -1.55
CSDE1-207ENST00000483407 C18orf12Q96KH6 178 aa5.36□□□□□ -1.55
CSDE1-207ENST00000483407 RILPQ96NA2 401 aa5.36□□□□□ -1.55
CSDE1-207ENST00000483407 TRIB1Q96RU8 372 aa5.36□□□□□ -1.55
CSDE1-207ENST00000483407 DIRC2Q96SL1 478 aa5.36□□□□□ -1.55
CSDE1-207ENST00000483407 SECISBP2Q96T21 854 aaKnown RBP5.36□□□□□ -1.55
CSDE1-207ENST00000483407 CPNE1Q99829 537 aa5.36□□□□□ -1.55
CSDE1-207ENST00000483407 WDR83Q9BRX9 315 aaKnown RBP5.36□□□□□ -1.55
CSDE1-207ENST00000483407 KRTAP17-1Q9BYP8 105 aa5.36□□□□□ -1.55
CSDE1-207ENST00000483407 KRTAP4-5Q9BYR2 181 aa5.36□□□□□ -1.55
CSDE1-207ENST00000483407 WWTR1Q9GZV5 400 aa5.36□□□□□ -1.55
CSDE1-207ENST00000483407 OR51B5Q9H339 312 aa5.36□□□□□ -1.55
CSDE1-207ENST00000483407 CAB39LQ9H9S4 337 aa5.36□□□□□ -1.55
CSDE1-207ENST00000483407 PROK2Q9HC23 129 aa5.36□□□□□ -1.55
CSDE1-207ENST00000483407 GCM1Q9NP62 436 aa5.36□□□□□ -1.55
CSDE1-207ENST00000483407 LYARQ9NX58 379 aaKnown RBP5.36□□□□□ -1.55
CSDE1-207ENST00000483407 NUDT4Q9NZJ9 180 aa5.36□□□□□ -1.55
CSDE1-207ENST00000483407 OPTCQ9UBM4 332 aa5.36□□□□□ -1.55
CSDE1-207ENST00000483407 MTO1Q9Y2Z2 717 aaKnown RBP5.36□□□□□ -1.55
CSDE1-207ENST00000483407 ANGPTL3Q9Y5C1 460 aa5.36□□□□□ -1.55
CSDE1-207ENST00000483407 IKBKGQ9Y6K9 419 aa5.36□□□□□ -1.55
CSDE1-207ENST00000483407 ABCA4P78363 2273 aa5.36□□□□□ -1.55
CSDE1-207ENST00000483407 MBD3L4A6NDZ8 208 aaPredicted RBP5.35□□□□□ -1.55
CSDE1-207ENST00000483407 MBD3L3A6NE82 208 aaPredicted RBP5.35□□□□□ -1.55
CSDE1-207ENST00000483407 MBD3L5A6NJ08 208 aaPredicted RBP5.35□□□□□ -1.55
CSDE1-207ENST00000483407 SYCE1LA8MT33 242 aa5.35□□□□□ -1.55
CSDE1-207ENST00000483407 EFCAB8A8MWE9 144 aa5.35□□□□□ -1.55
CSDE1-207ENST00000483407 SUPT3HB4E1H0 165 aa5.35□□□□□ -1.55
CSDE1-207ENST00000483407 E7ESA3 106 aa5.35□□□□□ -1.55
CSDE1-207ENST00000483407 K7EPI3 171 aa5.35□□□□□ -1.55
CSDE1-207ENST00000483407 PLPP1O14494 284 aa5.35□□□□□ -1.55
CSDE1-207ENST00000483407 CASKO14936 926 aa5.35□□□□□ -1.55
CSDE1-207ENST00000483407 ARHGEF9O43307 516 aa5.35□□□□□ -1.55
CSDE1-207ENST00000483407 ZSCAN12O43309 604 aa5.35□□□□□ -1.55
CSDE1-207ENST00000483407 SUPT3HO75486 399 aa5.35□□□□□ -1.55
CSDE1-207ENST00000483407 LRATO95237 230 aa5.35□□□□□ -1.55
CSDE1-207ENST00000483407 WISP3O95389 354 aaPredicted RBP5.35□□□□□ -1.55
CSDE1-207ENST00000483407 ACSL3O95573 720 aa5.35□□□□□ -1.55
CSDE1-207ENST00000483407 GPR75O95800 540 aa5.35□□□□□ -1.55
CSDE1-207ENST00000483407 HPNP05981 417 aa5.35□□□□□ -1.55
CSDE1-207ENST00000483407 INHBBP09529 407 aa5.35□□□□□ -1.55
CSDE1-207ENST00000483407 LTA4HP09960 611 aaKnown RBP5.35□□□□□ -1.55
CSDE1-207ENST00000483407 SLC35E2BP0CK96 405 aa5.35□□□□□ -1.55
CSDE1-207ENST00000483407 SLC35E2P0CK97 266 aa5.35□□□□□ -1.55
CSDE1-207ENST00000483407 TMIGD3P0DMS9 266 aaPredicted RBP5.35□□□□□ -1.55
CSDE1-207ENST00000483407 NR2F6P10588 404 aa5.35□□□□□ -1.55
CSDE1-207ENST00000483407 CYP4B1P13584 511 aa5.35□□□□□ -1.55
CSDE1-207ENST00000483407 EPORP19235 508 aa5.35□□□□□ -1.55
CSDE1-207ENST00000483407 GP5P40197 560 aa5.35□□□□□ -1.55
CSDE1-207ENST00000483407 PIK3CBP42338 1070 aa5.35□□□□□ -1.55
CSDE1-207ENST00000483407 CPA2P48052 419 aa5.35□□□□□ -1.55
CSDE1-207ENST00000483407 HNRNPH2P55795 449 aaKnown RBP5.35□□□□□ -1.55
CSDE1-207ENST00000483407 WNT3P56703 355 aa5.35□□□□□ -1.55
CSDE1-207ENST00000483407 FBXW4P57775 412 aa5.35□□□□□ -1.55
CSDE1-207ENST00000483407 RAB10P61026 200 aa5.35□□□□□ -1.55
CSDE1-207ENST00000483407 DCAF7P61962 342 aa5.35□□□□□ -1.55
CSDE1-207ENST00000483407 TOP3AQ13472 1001 aaPredicted RBP5.35□□□□□ -1.55
CSDE1-207ENST00000483407 E2F2Q14209 437 aa5.35□□□□□ -1.55
CSDE1-207ENST00000483407 FASTKD3Q14CZ7 662 aaKnown RBP5.35□□□□□ -1.55
CSDE1-207ENST00000483407 C19orf54Q5BKX5 351 aa5.35□□□□□ -1.55
CSDE1-207ENST00000483407 NHSL2Q5HYW2 709 aa5.35□□□□□ -1.55
CSDE1-207ENST00000483407 SHEQ5VZ18 495 aa5.35□□□□□ -1.55
CSDE1-207ENST00000483407 GRHL2Q6ISB3 625 aa5.35□□□□□ -1.55
CSDE1-207ENST00000483407 DGAT2L6Q6ZPD8 337 aa5.35□□□□□ -1.55
CSDE1-207ENST00000483407 RAPH1Q70E73 1250 aa5.35□□□□□ -1.55
CSDE1-207ENST00000483407 TBC1D1Q86TI0 1168 aaPredicted RBP5.35□□□□□ -1.55
CSDE1-207ENST00000483407 WFDC11Q8NEX6 87 aa5.35□□□□□ -1.55
CSDE1-207ENST00000483407 HUS1BQ8NHY5 278 aa5.35□□□□□ -1.55
CSDE1-207ENST00000483407 MBD3L2Q8NHZ7 208 aaPredicted RBP5.35□□□□□ -1.55
CSDE1-207ENST00000483407 LINC01560Q8TB33 94 aa5.35□□□□□ -1.55
CSDE1-207ENST00000483407 SPPL2AQ8TCT8 520 aa5.35□□□□□ -1.55
CSDE1-207ENST00000483407 DOK4Q8TEW6 326 aa5.35□□□□□ -1.55
CSDE1-207ENST00000483407 ABTB1Q969K4 478 aaPredicted RBP5.35□□□□□ -1.55
CSDE1-207ENST00000483407 ZBTB8AQ96BR9 441 aa5.35□□□□□ -1.55
CSDE1-207ENST00000483407 DTNBP1Q96EV8 351 aa5.35□□□□□ -1.55
CSDE1-207ENST00000483407 ZFP3Q96NJ6 502 aa5.35□□□□□ -1.55
CSDE1-207ENST00000483407 DACH2Q96NX9 599 aa5.35□□□□□ -1.55
CSDE1-207ENST00000483407 GNRHR2Q96P88 292 aa5.35□□□□□ -1.55
CSDE1-207ENST00000483407 MTERF1Q99551 399 aaKnown RBP5.35□□□□□ -1.55
CSDE1-207ENST00000483407 GPR22Q99680 433 aa5.35□□□□□ -1.55
CSDE1-207ENST00000483407 RBBP8Q99708 897 aa5.35□□□□□ -1.55
CSDE1-207ENST00000483407 RBM24Q9BX46 236 aaKnown RBP5.35□□□□□ -1.55
CSDE1-207ENST00000483407 SORBS1Q9BX66 1292 aaKnown RBP5.35□□□□□ -1.55
CSDE1-207ENST00000483407 ANGPTL4Q9BY76 406 aa5.35□□□□□ -1.55
CSDE1-207ENST00000483407 TRIM31Q9BZY9 425 aa5.35□□□□□ -1.55
CSDE1-207ENST00000483407 UBQLN3Q9H347 655 aa5.35□□□□□ -1.55
CSDE1-207ENST00000483407 ALG9Q9H6U8 611 aa5.35□□□□□ -1.55
CSDE1-207ENST00000483407 METTL7AQ9H8H3 244 aa5.35□□□□□ -1.55
CSDE1-207ENST00000483407 PLEKHF2Q9H8W4 249 aa5.35□□□□□ -1.55
CSDE1-207ENST00000483407 ACTR8Q9H981 624 aa5.35□□□□□ -1.55
CSDE1-207ENST00000483407 CALHM2Q9HA72 323 aa5.35□□□□□ -1.55
CSDE1-207ENST00000483407 NMRAL1Q9HBL8 299 aa5.35□□□□□ -1.55
CSDE1-207ENST00000483407 BEX4Q9NWD9 120 aaPredicted RBP5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms