RNA–Protein interactions for RNA: ENST00000483338.1

COL4A5-205, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 3,622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-205ENST00000483338 CLN6Q9NWW5 311 aa7.37□□□□□ -1.23
COL4A5-205ENST00000483338 FLRT1Q9NZU1 646 aa7.37□□□□□ -1.23
COL4A5-205ENST00000483338 UXTQ9UBK9 157 aaPredicted RBP7.37□□□□□ -1.23
COL4A5-205ENST00000483338 ZMYM5Q9UJ78 669 aa7.37□□□□□ -1.23
COL4A5-205ENST00000483338 SPIN1Q9Y657 262 aaPredicted RBP7.37□□□□□ -1.23
COL4A5-205ENST00000483338 TMEM72A0PK05 275 aa7.37□□□□□ -1.23
COL4A5-205ENST00000483338 CARNS1A5YM72 827 aa7.37□□□□□ -1.23
COL4A5-205ENST00000483338 C2orf78A6NCI8 922 aa7.37□□□□□ -1.23
COL4A5-205ENST00000483338 IFRD1O00458 451 aaPredicted RBP7.37□□□□□ -1.23
COL4A5-205ENST00000483338 EIF4E2O60573 245 aaKnown RBP7.37□□□□□ -1.23
COL4A5-205ENST00000483338 WISP3O95389 354 aaPredicted RBP7.37□□□□□ -1.23
COL4A5-205ENST00000483338 IFNA2P01563 188 aa7.37□□□□□ -1.23
COL4A5-205ENST00000483338 THP07101 528 aa7.37□□□□□ -1.23
COL4A5-205ENST00000483338 ANXA8P13928 327 aa7.37□□□□□ -1.23
COL4A5-205ENST00000483338 NME1P15531 152 aaKnown RBP7.37□□□□□ -1.23
COL4A5-205ENST00000483338 AKAP5P24588 427 aa7.37□□□□□ -1.23
COL4A5-205ENST00000483338 ZNF157P51786 506 aaPredicted RBP7.37□□□□□ -1.23
COL4A5-205ENST00000483338 PURAQ00577 322 aaKnown RBP7.37□□□□□ -1.23
COL4A5-205ENST00000483338 GAB1Q13480 694 aa7.37□□□□□ -1.23
COL4A5-205ENST00000483338 DOC2AQ14183 400 aa7.37□□□□□ -1.23
COL4A5-205ENST00000483338 PTGES3Q15185 160 aaKnown RBP7.37□□□□□ -1.23
COL4A5-205ENST00000483338 ANXA8L1Q5VT79 327 aa7.37□□□□□ -1.23
COL4A5-205ENST00000483338 SLC30A6Q6NXT4 461 aa7.37□□□□□ -1.23
COL4A5-205ENST00000483338 PTCHD4Q6ZW05 846 aa7.37□□□□□ -1.23
COL4A5-205ENST00000483338 LAS2Q8IYD9 372 aa7.37□□□□□ -1.23
COL4A5-205ENST00000483338 SPICQ8N5J4 248 aa7.37□□□□□ -1.23
COL4A5-205ENST00000483338 MYLIPQ8WY64 445 aa7.37□□□□□ -1.23
COL4A5-205ENST00000483338 UBL7Q96S82 380 aaPredicted RBP7.37□□□□□ -1.23
COL4A5-205ENST00000483338 CPPED1Q9BRF8 314 aaPredicted RBP7.37□□□□□ -1.23
COL4A5-205ENST00000483338 MESP1Q9BRJ9 268 aa7.37□□□□□ -1.23
COL4A5-205ENST00000483338 OR51B6Q9H340 312 aa7.37□□□□□ -1.23
COL4A5-205ENST00000483338 WWOXQ9NZC7 414 aa7.37□□□□□ -1.23
COL4A5-205ENST00000483338 A8MVJ9 347 aa7.37□□□□□ -1.23
COL4A5-205ENST00000483338 PRR23D1E9PI22 279 aaPredicted RBP7.37□□□□□ -1.23
COL4A5-205ENST00000483338 M0QZ92 97 aa7.37□□□□□ -1.23
COL4A5-205ENST00000483338 BCAT2O15382 392 aaPredicted RBP7.37□□□□□ -1.23
COL4A5-205ENST00000483338 SOX15O60248 233 aa7.37□□□□□ -1.23
COL4A5-205ENST00000483338 CRTAPO75718 401 aaPredicted RBP7.37□□□□□ -1.23
COL4A5-205ENST00000483338 YIF1AO95070 293 aa7.37□□□□□ -1.23
COL4A5-205ENST00000483338 SOD1P00441 154 aa7.37□□□□□ -1.23
COL4A5-205ENST00000483338 C1QCP02747 245 aa7.37□□□□□ -1.23
COL4A5-205ENST00000483338 CD3GP09693 182 aa7.37□□□□□ -1.23
COL4A5-205ENST00000483338 SBK2P0C263 348 aa7.37□□□□□ -1.23
COL4A5-205ENST00000483338 PRR23D2P0DMB1 279 aaPredicted RBP7.37□□□□□ -1.23
COL4A5-205ENST00000483338 ZNF25P17030 456 aaPredicted RBP7.37□□□□□ -1.23
COL4A5-205ENST00000483338 BDKRB2P30411 391 aa7.37□□□□□ -1.23
COL4A5-205ENST00000483338 SLC6A4P31645 630 aa7.37□□□□□ -1.23
COL4A5-205ENST00000483338 PPM1AP35813 382 aa7.37□□□□□ -1.23
COL4A5-205ENST00000483338 CSNK1EP49674 416 aaKnown RBP7.37□□□□□ -1.23
COL4A5-205ENST00000483338 PNLIPRP2P54317 469 aa7.37□□□□□ -1.23
COL4A5-205ENST00000483338 SLC14A1Q13336 389 aa7.37□□□□□ -1.23
COL4A5-205ENST00000483338 PTGR1Q14914 329 aa7.37□□□□□ -1.23
COL4A5-205ENST00000483338 INPP5JQ15735 1006 aaPredicted RBP7.37□□□□□ -1.23
COL4A5-205ENST00000483338 SLC10A6Q3KNW5 377 aa7.37□□□□□ -1.23
COL4A5-205ENST00000483338 RNASE12Q5GAN4 147 aaKnown RBP7.37□□□□□ -1.23
COL4A5-205ENST00000483338 KRBOX4Q5JUW0 171 aa7.37□□□□□ -1.23
COL4A5-205ENST00000483338 HECTD2Q5U5R9 776 aa7.37□□□□□ -1.23
COL4A5-205ENST00000483338 OVOS1Q6IE37 1185 aa7.37□□□□□ -1.23
COL4A5-205ENST00000483338 MZT2AQ6P582 158 aa7.37□□□□□ -1.23
COL4A5-205ENST00000483338 TMEM71Q6P5X7 295 aa7.37□□□□□ -1.23
COL4A5-205ENST00000483338 RNF165Q6ZSG1 346 aa7.37□□□□□ -1.23
COL4A5-205ENST00000483338 UNC93AQ86WB7 457 aa7.37□□□□□ -1.23
COL4A5-205ENST00000483338 C15orf54Q8N8G6 183 aa7.37□□□□□ -1.23
COL4A5-205ENST00000483338 HASPINQ8TF76 798 aa7.37□□□□□ -1.23
COL4A5-205ENST00000483338 SLC39A7Q92504 469 aa7.37□□□□□ -1.23
COL4A5-205ENST00000483338 POP5Q969H6 163 aaKnown RBP7.37□□□□□ -1.23
COL4A5-205ENST00000483338 C12orf42Q96LP6 360 aa7.37□□□□□ -1.23
COL4A5-205ENST00000483338 IL4I1Q96RQ9 567 aa7.37□□□□□ -1.23
COL4A5-205ENST00000483338 CLCC1Q96S66 551 aa7.37□□□□□ -1.23
COL4A5-205ENST00000483338 MYOZ1Q9NP98 299 aaPredicted RBP7.37□□□□□ -1.23
COL4A5-205ENST00000483338 ISYNA1Q9NPH2 558 aa7.37□□□□□ -1.23
COL4A5-205ENST00000483338 CYSLTR2Q9NS75 346 aa7.37□□□□□ -1.23
COL4A5-205ENST00000483338 GOLT1BQ9Y3E0 138 aa7.37□□□□□ -1.23
COL4A5-205ENST00000483338 ACTL6AO96019 429 aa7.36□□□□□ -1.23
COL4A5-205ENST00000483338 CD2P06729 351 aa7.36□□□□□ -1.23
COL4A5-205ENST00000483338 EIF4EP06730 217 aaKnown RBP7.36□□□□□ -1.23
COL4A5-205ENST00000483338 ANXA2P07355 339 aaKnown RBP7.36□□□□□ -1.23
COL4A5-205ENST00000483338 IQCF3P0C7M6 154 aa7.36□□□□□ -1.23
COL4A5-205ENST00000483338 CD1DP15813 335 aa7.36□□□□□ -1.23
COL4A5-205ENST00000483338 MAP3K8P41279 467 aa7.36□□□□□ -1.23
COL4A5-205ENST00000483338 RAB5CP51148 216 aa7.36□□□□□ -1.23
COL4A5-205ENST00000483338 CDC42P60953 191 aa7.36□□□□□ -1.23
COL4A5-205ENST00000483338 PPIGQ13427 754 aaKnown RBP eCLIP7.36□□□□□ -1.232e-6■■■■□ 24.6
COL4A5-205ENST00000483338 GINS1Q14691 196 aa7.36□□□□□ -1.23
COL4A5-205ENST00000483338 TGIF1Q15583 401 aa7.36□□□□□ -1.23
COL4A5-205ENST00000483338 KCNA10Q16322 511 aa7.36□□□□□ -1.23
COL4A5-205ENST00000483338 SLC5A12Q1EHB4 618 aa7.36□□□□□ -1.23
COL4A5-205ENST00000483338 SPANXN4Q5MJ08 99 aa7.36□□□□□ -1.23
COL4A5-205ENST00000483338 ARHGAP40Q5TG30 622 aa7.36□□□□□ -1.23
COL4A5-205ENST00000483338 FBXO46Q6PJ61 603 aaPredicted RBP7.36□□□□□ -1.23
COL4A5-205ENST00000483338 RABEPKQ7Z6M1 372 aa7.36□□□□□ -1.23
COL4A5-205ENST00000483338 TOMM5Q8N4H5 51 aa7.36□□□□□ -1.23
COL4A5-205ENST00000483338 OSTF1Q92882 214 aa7.36□□□□□ -1.23
COL4A5-205ENST00000483338 C7orf34Q96L11 122 aa7.36□□□□□ -1.23
COL4A5-205ENST00000483338 FCRL5Q96RD9 977 aa7.36□□□□□ -1.23
COL4A5-205ENST00000483338 F2RL3Q96RI0 385 aa7.36□□□□□ -1.23
COL4A5-205ENST00000483338 CHST5Q9GZS9 411 aa7.36□□□□□ -1.23
COL4A5-205ENST00000483338 FZD3Q9NPG1 666 aa7.36□□□□□ -1.23
COL4A5-205ENST00000483338 PRDM7Q9NQW5 492 aa7.36□□□□□ -1.23
COL4A5-205ENST00000483338 NANSQ9NR45 359 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms