RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 COLEC10Q9Y6Z7 277 aa7.25□□□□□ -1.25
SNX13-208ENST00000482558 A0A087WWL8 130 aa7.24□□□□□ -1.25
SNX13-208ENST00000482558 TRBC2A0A5B9 178 aa7.24□□□□□ -1.25
SNX13-208ENST00000482558 FAM90A18PA6NE21 464 aa7.24□□□□□ -1.25
SNX13-208ENST00000482558 FAM90A16PA6NEW6 464 aa7.24□□□□□ -1.25
SNX13-208ENST00000482558 IGLON5A6NGN9 336 aa7.24□□□□□ -1.25
SNX13-208ENST00000482558 FAM90A9PA6NNJ1 464 aa7.24□□□□□ -1.25
SNX13-208ENST00000482558 FAM90A5PA8MXJ8 464 aa7.24□□□□□ -1.25
SNX13-208ENST00000482558 K7ESM1 405 aa7.24□□□□□ -1.25
SNX13-208ENST00000482558 RAB27BO00194 218 aa7.24□□□□□ -1.25
SNX13-208ENST00000482558 PROM1O43490 865 aa7.24□□□□□ -1.25
SNX13-208ENST00000482558 MPZL2O60487 215 aa7.24□□□□□ -1.25
SNX13-208ENST00000482558 TPPPO94811 219 aa7.24□□□□□ -1.25
SNX13-208ENST00000482558 ETHE1O95571 254 aa7.24□□□□□ -1.25
SNX13-208ENST00000482558 KLK1P06870 262 aa7.24□□□□□ -1.25
SNX13-208ENST00000482558 FAM90A15PP0C7V4 464 aa7.24□□□□□ -1.25
SNX13-208ENST00000482558 FAM90A14PP0C7W9 464 aa7.24□□□□□ -1.25
SNX13-208ENST00000482558 FAHP16930 419 aa7.24□□□□□ -1.25
SNX13-208ENST00000482558 CCNA2P20248 432 aa7.24□□□□□ -1.25
SNX13-208ENST00000482558 MST1P26927 711 aa7.24□□□□□ -1.25
SNX13-208ENST00000482558 SLC5A2P31639 672 aa7.24□□□□□ -1.25
SNX13-208ENST00000482558 DRD3P35462 400 aa7.24□□□□□ -1.25
SNX13-208ENST00000482558 AHRP35869 848 aa7.24□□□□□ -1.25
SNX13-208ENST00000482558 CLCNKAP51800 687 aa7.24□□□□□ -1.25
SNX13-208ENST00000482558 MAPK12P53778 367 aa7.24□□□□□ -1.25
SNX13-208ENST00000482558 STARD6P59095 220 aa7.24□□□□□ -1.25
SNX13-208ENST00000482558 TAS2R50P59544 299 aa7.24□□□□□ -1.25
SNX13-208ENST00000482558 HBA1P69905 142 aa7.24□□□□□ -1.25
SNX13-208ENST00000482558 CDK6Q00534 326 aa7.24□□□□□ -1.25
SNX13-208ENST00000482558 PRDX1Q06830 199 aaKnown RBP7.24□□□□□ -1.25
SNX13-208ENST00000482558 CAMK2DQ13557 499 aa7.24□□□□□ -1.25
SNX13-208ENST00000482558 TSTA3Q13630 321 aaPredicted RBP7.24□□□□□ -1.25
SNX13-208ENST00000482558 LASP1Q14847 261 aaKnown RBP7.24□□□□□ -1.25
SNX13-208ENST00000482558 ZIK1Q3SY52 487 aaPredicted RBP7.24□□□□□ -1.25
SNX13-208ENST00000482558 ZNF628Q5EBL2 1059 aa7.24□□□□□ -1.25
SNX13-208ENST00000482558 MLIPQ5VWP3 458 aa7.24□□□□□ -1.25
SNX13-208ENST00000482558 REEP3Q6NUK4 255 aa7.24□□□□□ -1.25
SNX13-208ENST00000482558 ANKRD54Q6NXT1 300 aa7.24□□□□□ -1.25
SNX13-208ENST00000482558 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.24□□□□□ -1.25
SNX13-208ENST00000482558 ADGRD2Q7Z7M1 963 aa7.24□□□□□ -1.25
SNX13-208ENST00000482558 CYP4Z1Q86W10 505 aa7.24□□□□□ -1.25
SNX13-208ENST00000482558 TUSC5Q8IXB3 177 aa7.24□□□□□ -1.25
SNX13-208ENST00000482558 OFCC1Q8IZS5 231 aa7.24□□□□□ -1.25
SNX13-208ENST00000482558 CLECL1Q8IZS7 167 aa7.24□□□□□ -1.25
SNX13-208ENST00000482558 HDDC3Q8N4P3 179 aa7.24□□□□□ -1.25
SNX13-208ENST00000482558 LINC00471Q8N535 108 aa7.24□□□□□ -1.25
SNX13-208ENST00000482558 SLC15A4Q8N697 577 aa7.24□□□□□ -1.25
SNX13-208ENST00000482558 C12orf76Q8N812 135 aaPredicted RBP7.24□□□□□ -1.25
SNX13-208ENST00000482558 TTC29Q8NA56 475 aaPredicted RBP7.24□□□□□ -1.25
SNX13-208ENST00000482558 ZBTB8BQ8NAP8 495 aaPredicted RBP7.24□□□□□ -1.25
SNX13-208ENST00000482558 TP53I13Q8NBR0 393 aaPredicted RBP7.24□□□□□ -1.25
SNX13-208ENST00000482558 OR2L8Q8NGY9 312 aa7.24□□□□□ -1.25
SNX13-208ENST00000482558 PSMA8Q8TAA3 256 aa7.24□□□□□ -1.25
SNX13-208ENST00000482558 GIPC3Q8TF64 312 aa7.24□□□□□ -1.25
SNX13-208ENST00000482558 NR4A3Q92570 626 aa7.24□□□□□ -1.25
SNX13-208ENST00000482558 FCGR1BQ92637 280 aa7.24□□□□□ -1.25
SNX13-208ENST00000482558 SLC22A18Q96BI1 424 aa7.24□□□□□ -1.25
SNX13-208ENST00000482558 MRPL38Q96DV4 380 aaKnown RBP7.24□□□□□ -1.25
SNX13-208ENST00000482558 NEURL3Q96EH8 262 aa7.24□□□□□ -1.25
SNX13-208ENST00000482558 TOE1Q96GM8 510 aaKnown RBP7.24□□□□□ -1.25
SNX13-208ENST00000482558 C7orf34Q96L11 122 aa7.24□□□□□ -1.25
SNX13-208ENST00000482558 NODALQ96S42 347 aa7.24□□□□□ -1.25
SNX13-208ENST00000482558 PITX2Q99697 317 aa7.24□□□□□ -1.25
SNX13-208ENST00000482558 SPATA5L1Q9BVQ7 753 aa7.24□□□□□ -1.25
SNX13-208ENST00000482558 MS4A8Q9BY19 250 aa7.24□□□□□ -1.25
SNX13-208ENST00000482558 GABARAPL3Q9BY60 117 aa7.24□□□□□ -1.25
SNX13-208ENST00000482558 AMBRA1Q9C0C7 1298 aa7.24□□□□□ -1.25
SNX13-208ENST00000482558 ZNF556Q9HAH1 456 aa7.24□□□□□ -1.25
SNX13-208ENST00000482558 IL21RQ9HBE5 538 aa7.24□□□□□ -1.25
SNX13-208ENST00000482558 PALMDQ9NP74 551 aa7.24□□□□□ -1.25
SNX13-208ENST00000482558 A4GALTQ9NPC4 353 aa7.24□□□□□ -1.25
SNX13-208ENST00000482558 SIRT3Q9NTG7 399 aaPredicted RBP7.24□□□□□ -1.25
SNX13-208ENST00000482558 TMEM184CQ9NVA4 438 aa7.24□□□□□ -1.25
SNX13-208ENST00000482558 PDP1Q9P0J1 537 aaPredicted RBP7.24□□□□□ -1.25
SNX13-208ENST00000482558 EXTL2Q9UBQ6 330 aa7.24□□□□□ -1.25
SNX13-208ENST00000482558 NDRG4Q9ULP0 352 aaKnown RBP7.24□□□□□ -1.25
SNX13-208ENST00000482558 SLC17A4Q9Y2C5 497 aa7.24□□□□□ -1.25
SNX13-208ENST00000482558 POFUT2Q9Y2G5 429 aa7.24□□□□□ -1.25
SNX13-208ENST00000482558 GMPPBQ9Y5P6 360 aa7.24□□□□□ -1.25
SNX13-208ENST00000482558 GLOD5A6NK44 160 aa7.23□□□□□ -1.25
SNX13-208ENST00000482558 C5orf58C9J3I9 102 aa7.23□□□□□ -1.25
SNX13-208ENST00000482558 TNFRSF11BO00300 401 aa7.23□□□□□ -1.25
SNX13-208ENST00000482558 SLC1A7O00341 560 aa7.23□□□□□ -1.25
SNX13-208ENST00000482558 PEX12O00623 359 aa7.23□□□□□ -1.25
SNX13-208ENST00000482558 MID1O15344 667 aa7.23□□□□□ -1.25
SNX13-208ENST00000482558 PLRG1O43660 514 aaKnown RBP7.23□□□□□ -1.25
SNX13-208ENST00000482558 SERPINB7O75635 380 aa7.23□□□□□ -1.25
SNX13-208ENST00000482558 ANGPTL1O95841 491 aa7.23□□□□□ -1.25
SNX13-208ENST00000482558 C6orf47O95873 294 aa7.23□□□□□ -1.25
SNX13-208ENST00000482558 OPN1MWP04001 364 aa7.23□□□□□ -1.25
SNX13-208ENST00000482558 PCCBP05166 539 aa7.23□□□□□ -1.25
SNX13-208ENST00000482558 OPN1MW2P0DN77 364 aa7.23□□□□□ -1.25
SNX13-208ENST00000482558 OPN1MW3P0DN78 364 aa7.23□□□□□ -1.25
SNX13-208ENST00000482558 ETS2P15036 469 aa7.23□□□□□ -1.25
SNX13-208ENST00000482558 PTAFRP25105 342 aa7.23□□□□□ -1.25
SNX13-208ENST00000482558 NTSR1P30989 418 aa7.23□□□□□ -1.25
SNX13-208ENST00000482558 FRKP42685 505 aaPredicted RBP7.23□□□□□ -1.25
SNX13-208ENST00000482558 HMGA2P52926 109 aa7.23□□□□□ -1.25
SNX13-208ENST00000482558 CDH15P55291 814 aa7.23□□□□□ -1.25
SNX13-208ENST00000482558 KIAA1024LP59773 190 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms