RNA–Protein interactions for RNA: ENST00000482251.2

CPSF4-212, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-212ENST00000482251 PPCDCQ96CD2 204 aa9.51□□□□□ -0.89
CPSF4-212ENST00000482251 ELP4Q96EB1 424 aa9.51□□□□□ -0.89
CPSF4-212ENST00000482251 RMND5BQ96G75 393 aaPredicted RBP9.51□□□□□ -0.89
CPSF4-212ENST00000482251 CCT7Q99832 543 aa9.51□□□□□ -0.89
CPSF4-212ENST00000482251 SH3GL2Q99962 352 aa9.51□□□□□ -0.89
CPSF4-212ENST00000482251 C1orf50Q9BV19 199 aa9.51□□□□□ -0.89
CPSF4-212ENST00000482251 RTN4RQ9BZR6 473 aa9.51□□□□□ -0.89
CPSF4-212ENST00000482251 Q9N2J8 555 aa9.51□□□□□ -0.89
CPSF4-212ENST00000482251 CRIM1Q9NZV1 1036 aa9.51□□□□□ -0.89
CPSF4-212ENST00000482251 SH3BP4Q9P0V3 963 aa9.51□□□□□ -0.89
CPSF4-212ENST00000482251 LGALS13Q9UHV8 139 aa9.51□□□□□ -0.89
CPSF4-212ENST00000482251 CBLCQ9ULV8 474 aa9.51□□□□□ -0.89
CPSF4-212ENST00000482251 DNAJC15Q9Y5T4 150 aa9.51□□□□□ -0.89
CPSF4-212ENST00000482251 MBD3L4A6NDZ8 208 aaPredicted RBP9.5□□□□□ -0.89
CPSF4-212ENST00000482251 MBD3L3A6NE82 208 aaPredicted RBP9.5□□□□□ -0.89
CPSF4-212ENST00000482251 MBD3L5A6NJ08 208 aaPredicted RBP9.5□□□□□ -0.89
CPSF4-212ENST00000482251 CLCA1A8K7I4 914 aa9.5□□□□□ -0.89
CPSF4-212ENST00000482251 PLOD2O00469 737 aa9.5□□□□□ -0.89
CPSF4-212ENST00000482251 PSMG1O95456 288 aa9.5□□□□□ -0.89
CPSF4-212ENST00000482251 TMIGD3P0DMS9 266 aaPredicted RBP9.5□□□□□ -0.89
CPSF4-212ENST00000482251 POU3F2P20265 443 aaPredicted RBP9.5□□□□□ -0.89
CPSF4-212ENST00000482251 PRPH2P23942 346 aa9.5□□□□□ -0.89
CPSF4-212ENST00000482251 DPP4P27487 766 aa9.5□□□□□ -0.89
CPSF4-212ENST00000482251 SRD5A2P31213 254 aa9.5□□□□□ -0.89
CPSF4-212ENST00000482251 CEACAM8P31997 349 aaPredicted RBP9.5□□□□□ -0.89
CPSF4-212ENST00000482251 ARRB2P32121 409 aa9.5□□□□□ -0.89
CPSF4-212ENST00000482251 TIMP3P35625 211 aa9.5□□□□□ -0.89
CPSF4-212ENST00000482251 PNLIPRP2P54317 469 aa9.5□□□□□ -0.89
CPSF4-212ENST00000482251 GFRA1P56159 465 aa9.5□□□□□ -0.89
CPSF4-212ENST00000482251 FOXF2Q12947 444 aa9.5□□□□□ -0.89
CPSF4-212ENST00000482251 GAB1Q13480 694 aa9.5□□□□□ -0.89
CPSF4-212ENST00000482251 DECR1Q16698 335 aa9.5□□□□□ -0.89
CPSF4-212ENST00000482251 ENPP6Q6UWR7 440 aa9.5□□□□□ -0.89
CPSF4-212ENST00000482251 EXOC3L1Q86VI1 746 aa9.5□□□□□ -0.89
CPSF4-212ENST00000482251 MBD3L2Q8NHZ7 208 aaPredicted RBP9.5□□□□□ -0.89
CPSF4-212ENST00000482251 PKNOX2Q96KN3 472 aa9.5□□□□□ -0.89
CPSF4-212ENST00000482251 GPATCH1Q9BRR8 931 aaKnown RBP9.5□□□□□ -0.89
CPSF4-212ENST00000482251 YIPF4Q9BSR8 244 aa9.5□□□□□ -0.89
CPSF4-212ENST00000482251 TRMOQ9BU70 441 aa9.5□□□□□ -0.89
CPSF4-212ENST00000482251 G6PC3Q9BUM1 346 aa9.5□□□□□ -0.89
CPSF4-212ENST00000482251 DSN1Q9H410 356 aa9.5□□□□□ -0.89
CPSF4-212ENST00000482251 REEP4Q9H6H4 257 aa9.5□□□□□ -0.89
CPSF4-212ENST00000482251 TAS2R7Q9NYW3 318 aa9.5□□□□□ -0.89
CPSF4-212ENST00000482251 MED11Q9P086 117 aa9.5□□□□□ -0.89
CPSF4-212ENST00000482251 KCNN3Q9UGI6 736 aa9.5□□□□□ -0.89
CPSF4-212ENST00000482251 DOCK7Q96N67 2140 aa9.5□□□□□ -0.89
CPSF4-212ENST00000482251 CCDC168Q8NDH2 2452 aa9.49□□□□□ -0.89
CPSF4-212ENST00000482251 TACC2O95359 2948 aa9.49□□□□□ -0.89
CPSF4-212ENST00000482251 CD8B2A6NJW9 211 aa9.49□□□□□ -0.89
CPSF4-212ENST00000482251 SHISA8B8ZZ34 492 aa9.49□□□□□ -0.89
CPSF4-212ENST00000482251 H0YC42 278 aa9.49□□□□□ -0.89
CPSF4-212ENST00000482251 H3BML4 177 aa9.49□□□□□ -0.89
CPSF4-212ENST00000482251 SEC14L5O43304 696 aa9.49□□□□□ -0.89
CPSF4-212ENST00000482251 NPHS1O60500 1241 aa9.49□□□□□ -0.89
CPSF4-212ENST00000482251 PEX11AO75192 247 aa9.49□□□□□ -0.89
CPSF4-212ENST00000482251 SLITRK5O94991 958 aa9.49□□□□□ -0.89
CPSF4-212ENST00000482251 SLU7O95391 586 aaKnown RBP9.49□□□□□ -0.89
CPSF4-212ENST00000482251 IGKV1D-16P01601 117 aa9.49□□□□□ -0.89
CPSF4-212ENST00000482251 HK1P19367 917 aa9.49□□□□□ -0.89
CPSF4-212ENST00000482251 GABRA3P34903 492 aa9.49□□□□□ -0.89
CPSF4-212ENST00000482251 KIR2DL3P43628 341 aa9.49□□□□□ -0.89
CPSF4-212ENST00000482251 LHX2P50458 406 aa9.49□□□□□ -0.89
CPSF4-212ENST00000482251 TPD52P55327 224 aaPredicted RBP9.49□□□□□ -0.89
CPSF4-212ENST00000482251 CLDN18P56856 261 aa9.49□□□□□ -0.89
CPSF4-212ENST00000482251 MRPS22P82650 360 aaKnown RBP9.49□□□□□ -0.89
CPSF4-212ENST00000482251 GRAMD1BQ3KR37 738 aa9.49□□□□□ -0.89
CPSF4-212ENST00000482251 CYP27C1Q4G0S4 372 aa9.49□□□□□ -0.89
CPSF4-212ENST00000482251 CES4AQ5XG92 561 aa9.49□□□□□ -0.89
CPSF4-212ENST00000482251 AAGABQ6PD74 315 aa9.49□□□□□ -0.89
CPSF4-212ENST00000482251 FIGNL1Q6PIW4 674 aa9.49□□□□□ -0.89
CPSF4-212ENST00000482251 POMZP3Q6PJE2 187 aa9.49□□□□□ -0.89
CPSF4-212ENST00000482251 LUZP2Q86TE4 346 aa9.49□□□□□ -0.89
CPSF4-212ENST00000482251 MARCH3Q86UD3 253 aa9.49□□□□□ -0.89
CPSF4-212ENST00000482251 GRAMD2AQ8IUY3 354 aa9.49□□□□□ -0.89
CPSF4-212ENST00000482251 GATSQ8NAP1 163 aa9.49□□□□□ -0.89
CPSF4-212ENST00000482251 OR2M3Q8NG83 312 aa9.49□□□□□ -0.89
CPSF4-212ENST00000482251 OR7A2PQ8NGA2 310 aa9.49□□□□□ -0.89
CPSF4-212ENST00000482251 ZFP28Q8NHY6 868 aa9.49□□□□□ -0.89
CPSF4-212ENST00000482251 GPR151Q8TDV0 419 aa9.49□□□□□ -0.89
CPSF4-212ENST00000482251 NUDT8Q8WV74 236 aa9.49□□□□□ -0.89
CPSF4-212ENST00000482251 RNF138Q8WVD3 245 aa9.49□□□□□ -0.89
CPSF4-212ENST00000482251 SMPDL3BQ92485 455 aa9.49□□□□□ -0.89
CPSF4-212ENST00000482251 SLC9A6Q92581 669 aa9.49□□□□□ -0.89
CPSF4-212ENST00000482251 JADE3Q92613 823 aa9.49□□□□□ -0.89
CPSF4-212ENST00000482251 RNASE6Q93091 150 aaKnown RBP9.49□□□□□ -0.89
CPSF4-212ENST00000482251 INTS12Q96CB8 462 aaKnown RBP9.49□□□□□ -0.89
CPSF4-212ENST00000482251 ZBED6CLQ96FA7 236 aaPredicted RBP9.49□□□□□ -0.89
CPSF4-212ENST00000482251 FCRL1Q96LA6 429 aa9.49□□□□□ -0.89
CPSF4-212ENST00000482251 PPP1R36Q96LQ0 422 aa9.49□□□□□ -0.89
CPSF4-212ENST00000482251 MS4A4EQ96PG1 132 aa9.49□□□□□ -0.89
CPSF4-212ENST00000482251 LMF2Q9BU23 707 aaKnown RBP9.49□□□□□ -0.89
CPSF4-212ENST00000482251 CLCF1Q9UBD9 225 aa9.49□□□□□ -0.89
CPSF4-212ENST00000482251 TRAF6Q9Y4K3 522 aa9.49□□□□□ -0.89
CPSF4-212ENST00000482251 ANKRD17O75179 2603 aaKnown RBP9.49□□□□□ -0.89
CPSF4-212ENST00000482251 WDR91A4D1P6 747 aa9.48□□□□□ -0.89
CPSF4-212ENST00000482251 NPIPB8E9PQR5 432 aa9.48□□□□□ -0.89
CPSF4-212ENST00000482251 SCAMP2O15127 329 aaKnown RBP9.48□□□□□ -0.89
CPSF4-212ENST00000482251 FADS1O60427 444 aa9.48□□□□□ -0.89
CPSF4-212ENST00000482251 ZIC3O60481 467 aa9.48□□□□□ -0.89
CPSF4-212ENST00000482251 LYPLA1O75608 230 aaPredicted RBP9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms