RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 IL9RQ01113 521 aa4.28□□□□□ -1.72
SF3B1-210ENST00000482158 UBE2V2Q15819 145 aa4.28□□□□□ -1.72
SF3B1-210ENST00000482158 CYBRD1Q53TN4 286 aa4.28□□□□□ -1.72
SF3B1-210ENST00000482158 WASH2PQ6VEQ5 465 aa4.28□□□□□ -1.72
SF3B1-210ENST00000482158 TMEM184AQ6ZMB5 413 aa4.28□□□□□ -1.72
SF3B1-210ENST00000482158 RHOXF1Q8NHV9 184 aa4.28□□□□□ -1.72
SF3B1-210ENST00000482158 VN1R17PQ8TDU5 208 aa4.28□□□□□ -1.72
SF3B1-210ENST00000482158 TM2D1Q9BX74 207 aa4.28□□□□□ -1.72
SF3B1-210ENST00000482158 TBC1D10AQ9BXI6 508 aa4.28□□□□□ -1.72
SF3B1-210ENST00000482158 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.28□□□□□ -1.72
SF3B1-210ENST00000482158 IGHV3-35A0A0C4DH35 117 aa4.27□□□□□ -1.73
SF3B1-210ENST00000482158 LRRC30A6NM36 301 aa4.27□□□□□ -1.73
SF3B1-210ENST00000482158 EFCAB7A8K855 629 aa4.27□□□□□ -1.73
SF3B1-210ENST00000482158 G3V3Y1 287 aa4.27□□□□□ -1.73
SF3B1-210ENST00000482158 SDHDO14521 159 aa4.27□□□□□ -1.73
SF3B1-210ENST00000482158 LCMT2O60294 686 aaKnown RBP4.27□□□□□ -1.73
SF3B1-210ENST00000482158 RAMP1O60894 148 aa4.27□□□□□ -1.73
SF3B1-210ENST00000482158 SLC2A10O95528 541 aa4.27□□□□□ -1.73
SF3B1-210ENST00000482158 GSTT2P0CG29 244 aa4.27□□□□□ -1.73
SF3B1-210ENST00000482158 GSTT2BP0CG30 244 aa4.27□□□□□ -1.73
SF3B1-210ENST00000482158 PAICSP22234 425 aaKnown RBP4.27□□□□□ -1.73
SF3B1-210ENST00000482158 DPP4P27487 766 aa4.27□□□□□ -1.73
SF3B1-210ENST00000482158 CYLC1P35663 651 aaPredicted RBP4.27□□□□□ -1.73
SF3B1-210ENST00000482158 PTGFRP43088 359 aa4.27□□□□□ -1.73
SF3B1-210ENST00000482158 MTTPP55157 894 aa4.27□□□□□ -1.73
SF3B1-210ENST00000482158 IL18R1Q13478 541 aa4.27□□□□□ -1.73
SF3B1-210ENST00000482158 LCE1EQ5T753 118 aa4.27□□□□□ -1.73
SF3B1-210ENST00000482158 LGSNQ5TDP6 509 aa4.27□□□□□ -1.73
SF3B1-210ENST00000482158 PAMR1Q6UXH9 720 aa4.27□□□□□ -1.73
SF3B1-210ENST00000482158 STAC2Q6ZMT1 411 aa4.27□□□□□ -1.73
SF3B1-210ENST00000482158 CATSPER4Q7RTX7 472 aa4.27□□□□□ -1.73
SF3B1-210ENST00000482158 ADCK1Q86TW2 530 aa4.27□□□□□ -1.73
SF3B1-210ENST00000482158 CBWD2Q8IUF1 395 aa4.27□□□□□ -1.73
SF3B1-210ENST00000482158 MISPQ8IVT2 679 aa4.27□□□□□ -1.73
SF3B1-210ENST00000482158 EFCAB13Q8IY85 973 aa4.27□□□□□ -1.73
SF3B1-210ENST00000482158 VSTM2LQ96N03 204 aa4.27□□□□□ -1.73
SF3B1-210ENST00000482158 LIN28AQ9H9Z2 209 aaKnown RBP4.27□□□□□ -1.73
SF3B1-210ENST00000482158 AGPAT5Q9NUQ2 364 aa4.27□□□□□ -1.73
SF3B1-210ENST00000482158 C1orf123Q9NWV4 160 aa4.27□□□□□ -1.73
SF3B1-210ENST00000482158 HPF1Q9NWY4 346 aa4.27□□□□□ -1.73
SF3B1-210ENST00000482158 SENP1Q9P0U3 644 aa4.27□□□□□ -1.73
SF3B1-210ENST00000482158 ANKMY1Q9P2S6 941 aa4.27□□□□□ -1.73
SF3B1-210ENST00000482158 Q9UF83 564 aa4.27□□□□□ -1.73
SF3B1-210ENST00000482158 SMAD5-AS1Q9Y6J3 95 aa4.27□□□□□ -1.73
SF3B1-210ENST00000482158 GRIN2DO15399 1336 aa4.26□□□□□ -1.73
SF3B1-210ENST00000482158 A0A1B0GUL7 405 aa4.26□□□□□ -1.73
SF3B1-210ENST00000482158 A8MX80 341 aa4.26□□□□□ -1.73
SF3B1-210ENST00000482158 FAM220BPB1ANY3 271 aa4.26□□□□□ -1.73
SF3B1-210ENST00000482158 K7EPI3 171 aa4.26□□□□□ -1.73
SF3B1-210ENST00000482158 SCGB2A1O75556 95 aa4.26□□□□□ -1.73
SF3B1-210ENST00000482158 DIRAS3O95661 229 aa4.26□□□□□ -1.73
SF3B1-210ENST00000482158 IGFBP1P08833 259 aaPredicted RBP4.26□□□□□ -1.73
SF3B1-210ENST00000482158 SLC35E2P0CK97 266 aa4.26□□□□□ -1.73
SF3B1-210ENST00000482158 XRCC1P18887 633 aaPredicted RBP4.26□□□□□ -1.73
SF3B1-210ENST00000482158 IL2RGP31785 369 aa4.26□□□□□ -1.73
SF3B1-210ENST00000482158 KRTAP10-5P60370 271 aa4.26□□□□□ -1.73
SF3B1-210ENST00000482158 SCGB2A2Q13296 93 aa4.26□□□□□ -1.73
SF3B1-210ENST00000482158 ZNF57Q68EA5 555 aaPredicted RBP4.26□□□□□ -1.73
SF3B1-210ENST00000482158 ARSKQ6UWY0 536 aa4.26□□□□□ -1.73
SF3B1-210ENST00000482158 BAIAP2L2Q6UXY1 529 aa4.26□□□□□ -1.73
SF3B1-210ENST00000482158 PARGQ86W56 976 aa4.26□□□□□ -1.73
SF3B1-210ENST00000482158 GCNT2Q8N0V5 402 aa4.26□□□□□ -1.73
SF3B1-210ENST00000482158 Q8N9G6 341 aaPredicted RBP4.26□□□□□ -1.73
SF3B1-210ENST00000482158 MRAPQ8TCY5 172 aa4.26□□□□□ -1.73
SF3B1-210ENST00000482158 ADAMTS16Q8TE57 1224 aa4.26□□□□□ -1.73
SF3B1-210ENST00000482158 GIPC3Q8TF64 312 aa4.26□□□□□ -1.73
SF3B1-210ENST00000482158 FICDQ9BVA6 458 aa4.26□□□□□ -1.73
SF3B1-210ENST00000482158 MRPL13Q9BYD1 178 aaKnown RBP4.26□□□□□ -1.73
SF3B1-210ENST00000482158 OPN3Q9H1Y3 402 aaPredicted RBP4.26□□□□□ -1.73
SF3B1-210ENST00000482158 LPAR2Q9HBW0 351 aa4.26□□□□□ -1.73
SF3B1-210ENST00000482158 RBM28Q9NW13 759 aaKnown RBP4.26□□□□□ -1.73
SF3B1-210ENST00000482158 RSPH14Q9UHP6 348 aa4.26□□□□□ -1.73
SF3B1-210ENST00000482158 ATP6V1HQ9UI12 483 aa4.26□□□□□ -1.73
SF3B1-210ENST00000482158 CCDC7Q96M83 1385 aa4.26□□□□□ -1.73
SF3B1-210ENST00000482158 ZSCAN5BA6NJL1 495 aa4.25□□□□□ -1.73
SF3B1-210ENST00000482158 PPIHO43447 177 aaKnown RBP4.25□□□□□ -1.73
SF3B1-210ENST00000482158 OR4F21O95013 312 aa4.25□□□□□ -1.73
SF3B1-210ENST00000482158 PGAM2P15259 253 aa4.25□□□□□ -1.73
SF3B1-210ENST00000482158 SDC1P18827 310 aa4.25□□□□□ -1.73
SF3B1-210ENST00000482158 CYP2F1P24903 491 aa4.25□□□□□ -1.73
SF3B1-210ENST00000482158 AXLP30530 894 aa4.25□□□□□ -1.73
SF3B1-210ENST00000482158 RPL4P36578 427 aaKnown RBP4.25□□□□□ -1.73
SF3B1-210ENST00000482158 DPYSL3Q14195 570 aa4.25□□□□□ -1.73
SF3B1-210ENST00000482158 TRIP10Q15642 601 aa4.25□□□□□ -1.73
SF3B1-210ENST00000482158 LINC01620Q4KN68 170 aa4.25□□□□□ -1.73
SF3B1-210ENST00000482158 UTF1Q5T230 341 aa4.25□□□□□ -1.73
SF3B1-210ENST00000482158 SLX4IPQ5VYV7 408 aa4.25□□□□□ -1.73
SF3B1-210ENST00000482158 VITQ6UXI7 678 aa4.25□□□□□ -1.73
SF3B1-210ENST00000482158 CYS1Q717R9 158 aa4.25□□□□□ -1.73
SF3B1-210ENST00000482158 UPRTQ96BW1 309 aa4.25□□□□□ -1.73
SF3B1-210ENST00000482158 PPP1R16AQ96I34 528 aa4.25□□□□□ -1.73
SF3B1-210ENST00000482158 CCT8L2Q96SF2 557 aa4.25□□□□□ -1.73
SF3B1-210ENST00000482158 TMEM121Q9BTD3 319 aa4.25□□□□□ -1.73
SF3B1-210ENST00000482158 IKZF5Q9H5V7 419 aa4.25□□□□□ -1.73
SF3B1-210ENST00000482158 CALHM2Q9HA72 323 aa4.25□□□□□ -1.73
SF3B1-210ENST00000482158 EXOSC3Q9NQT5 275 aaKnown RBP4.25□□□□□ -1.73
SF3B1-210ENST00000482158 ELOVL2Q9NXB9 296 aa4.25□□□□□ -1.73
SF3B1-210ENST00000482158 UTP6Q9NYH9 597 aaKnown RBP4.25□□□□□ -1.73
SF3B1-210ENST00000482158 SLC2A6Q9UGQ3 507 aa4.25□□□□□ -1.73
SF3B1-210ENST00000482158 B9D1Q9UPM9 204 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms