RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 RFX3P48380 749 aa16.81■□□□□ 0.28
CLK1-211ENST00000481641 B3GALT5-AS1P59052 145 aa16.81■□□□□ 0.28
CLK1-211ENST00000481641 KIAA0040Q15053 153 aa16.81■□□□□ 0.28
CLK1-211ENST00000481641 ZNF551Q7Z340 670 aaPredicted RBP16.81■□□□□ 0.28
CLK1-211ENST00000481641 LUZP2Q86TE4 346 aa16.81■□□□□ 0.28
CLK1-211ENST00000481641 TDRPQ86YL5 185 aa16.81■□□□□ 0.28
CLK1-211ENST00000481641 C10orf107Q8IVU9 208 aa16.81■□□□□ 0.28
CLK1-211ENST00000481641 FAM76AQ8TAV0 307 aa16.81■□□□□ 0.28
CLK1-211ENST00000481641 ELP4Q96EB1 424 aa16.81■□□□□ 0.28
CLK1-211ENST00000481641 DDX18Q9NVP1 670 aaKnown RBP16.81■□□□□ 0.28
CLK1-211ENST00000481641 PPP4R1LQ9P1A2 415 aa16.81■□□□□ 0.28
CLK1-211ENST00000481641 CLCF1Q9UBD9 225 aa16.81■□□□□ 0.28
CLK1-211ENST00000481641 ST6GALNAC2Q9UJ37 374 aa16.81■□□□□ 0.28
CLK1-211ENST00000481641 PLEKHA6Q9Y2H5 1048 aa16.81■□□□□ 0.28
CLK1-211ENST00000481641 GXYLT2A0PJZ3 443 aa16.8■□□□□ 0.28
CLK1-211ENST00000481641 RCBTB2O95199 551 aa16.8■□□□□ 0.28
CLK1-211ENST00000481641 PSMG1O95456 288 aa16.8■□□□□ 0.28
CLK1-211ENST00000481641 TGM6O95932 706 aa16.8■□□□□ 0.28
CLK1-211ENST00000481641 ZNF708P17019 499 aa16.8■□□□□ 0.28
CLK1-211ENST00000481641 NAA20P61599 178 aa16.8■□□□□ 0.28
CLK1-211ENST00000481641 CYP27C1Q4G0S4 372 aa16.8■□□□□ 0.28
CLK1-211ENST00000481641 LIPMQ5VYY2 423 aa16.8■□□□□ 0.28
CLK1-211ENST00000481641 AAGABQ6PD74 315 aa16.8■□□□□ 0.28
CLK1-211ENST00000481641 OR2L13Q8N349 312 aa16.8■□□□□ 0.28
CLK1-211ENST00000481641 FADS6Q8N9I5 356 aa16.8■□□□□ 0.28
CLK1-211ENST00000481641 OR2M3Q8NG83 312 aa16.8■□□□□ 0.28
CLK1-211ENST00000481641 OR5M1Q8NGP8 315 aa16.8■□□□□ 0.28
CLK1-211ENST00000481641 OR2T11Q8NH01 316 aa16.8■□□□□ 0.28
CLK1-211ENST00000481641 WNT2BQ93097 391 aa16.8■□□□□ 0.28
CLK1-211ENST00000481641 CIDECQ96AQ7 238 aaPredicted RBP16.8■□□□□ 0.28
CLK1-211ENST00000481641 TM9SF2Q99805 663 aa16.8■□□□□ 0.28
CLK1-211ENST00000481641 GATA5Q9BWX5 397 aaPredicted RBP16.8■□□□□ 0.28
CLK1-211ENST00000481641 RBM24Q9BX46 236 aaKnown RBP16.8■□□□□ 0.28
CLK1-211ENST00000481641 MRPS18CQ9Y3D5 142 aaKnown RBP16.8■□□□□ 0.28
CLK1-211ENST00000481641 H0YC42 278 aa16.79■□□□□ 0.28
CLK1-211ENST00000481641 H3BQF6 201 aa16.79■□□□□ 0.28
CLK1-211ENST00000481641 AKAP10O43572 662 aa16.79■□□□□ 0.28
CLK1-211ENST00000481641 EPXP11678 715 aa16.79■□□□□ 0.28
CLK1-211ENST00000481641 HK1P19367 917 aa16.79■□□□□ 0.28
CLK1-211ENST00000481641 CHMP24386 653 aa16.79■□□□□ 0.28
CLK1-211ENST00000481641 TPD52P55327 224 aaPredicted RBP16.79■□□□□ 0.28
CLK1-211ENST00000481641 DSCR4P56555 118 aaPredicted RBP16.79■□□□□ 0.28
CLK1-211ENST00000481641 PSPHP78330 225 aa16.79■□□□□ 0.28
CLK1-211ENST00000481641 MRPS22P82650 360 aaKnown RBP16.79■□□□□ 0.28
CLK1-211ENST00000481641 SLC18A2Q05940 514 aa16.79■□□□□ 0.28
CLK1-211ENST00000481641 HSPB3Q12988 150 aa16.79■□□□□ 0.28
CLK1-211ENST00000481641 PCLAFQ15004 111 aa16.79■□□□□ 0.28
CLK1-211ENST00000481641 DAZAP2Q15038 168 aaPredicted RBP16.79■□□□□ 0.28
CLK1-211ENST00000481641 ZNF385BQ569K4 471 aa16.79■□□□□ 0.28
CLK1-211ENST00000481641 Q6ZSR9 355 aa16.79■□□□□ 0.28
CLK1-211ENST00000481641 IKBIPQ70UQ0 350 aa16.79■□□□□ 0.28
CLK1-211ENST00000481641 MARCH3Q86UD3 253 aa16.79■□□□□ 0.28
CLK1-211ENST00000481641 KIF18BQ86Y91 864 aa16.79■□□□□ 0.28
CLK1-211ENST00000481641 GRAMD2AQ8IUY3 354 aa16.79■□□□□ 0.28
CLK1-211ENST00000481641 UBQLNLQ8IYU4 475 aa16.79■□□□□ 0.28
CLK1-211ENST00000481641 OR2W6PQ8NHA6 318 aa16.79■□□□□ 0.28
CLK1-211ENST00000481641 GOT1L1Q8NHS2 421 aaPredicted RBP16.79■□□□□ 0.28
CLK1-211ENST00000481641 CLHC1Q8NHS4 586 aa16.79■□□□□ 0.28
CLK1-211ENST00000481641 RMND5BQ96G75 393 aaPredicted RBP16.79■□□□□ 0.28
CLK1-211ENST00000481641 UCN2Q96RP3 112 aa16.79■□□□□ 0.28
CLK1-211ENST00000481641 SFXN3Q9BWM7 321 aa16.79■□□□□ 0.28
CLK1-211ENST00000481641 TUBB1Q9H4B7 451 aa16.79■□□□□ 0.28
CLK1-211ENST00000481641 LRTM1Q9HBL6 345 aa16.79■□□□□ 0.28
CLK1-211ENST00000481641 Q9N2J8 555 aa16.79■□□□□ 0.28
CLK1-211ENST00000481641 EQTNQ9NQ60 294 aa16.79■□□□□ 0.28
CLK1-211ENST00000481641 C1orf109Q9NX04 203 aa16.79■□□□□ 0.28
CLK1-211ENST00000481641 GALNT8Q9NY28 637 aa16.79■□□□□ 0.28
CLK1-211ENST00000481641 TLDC2A0PJX2 215 aa16.78■□□□□ 0.28
CLK1-211ENST00000481641 SLC28A1O00337 649 aa16.78■□□□□ 0.28
CLK1-211ENST00000481641 AZIN1O14977 448 aa16.78■□□□□ 0.28
CLK1-211ENST00000481641 GMFGO60234 142 aa16.78■□□□□ 0.28
CLK1-211ENST00000481641 IGKV1D-16P01601 117 aa16.78■□□□□ 0.28
CLK1-211ENST00000481641 LINC00032P0C843 101 aa16.78■□□□□ 0.28
CLK1-211ENST00000481641 GABRA3P34903 492 aa16.78■□□□□ 0.28
CLK1-211ENST00000481641 CLDN15P56746 228 aa16.78■□□□□ 0.28
CLK1-211ENST00000481641 RIPPLY3P57055 190 aa16.78■□□□□ 0.28
CLK1-211ENST00000481641 DECR1Q16698 335 aa16.78■□□□□ 0.28
CLK1-211ENST00000481641 RAET1LQ5VY80 246 aa16.78■□□□□ 0.28
CLK1-211ENST00000481641 FBXW10Q5XX13 1052 aa16.78■□□□□ 0.28
CLK1-211ENST00000481641 GALNT10Q86SR1 603 aa16.78■□□□□ 0.28
CLK1-211ENST00000481641 CNPY4Q8N129 248 aa16.78■□□□□ 0.28
CLK1-211ENST00000481641 EIF1ADQ8N9N8 165 aaKnown RBP16.78■□□□□ 0.28
CLK1-211ENST00000481641 DUSP19Q8WTR2 217 aa16.78■□□□□ 0.28
CLK1-211ENST00000481641 PIK3R3Q92569 461 aa16.78■□□□□ 0.28
CLK1-211ENST00000481641 TSSK3Q96PN8 268 aa16.78■□□□□ 0.28
CLK1-211ENST00000481641 LMF2Q9BU23 707 aaKnown RBP16.78■□□□□ 0.28
CLK1-211ENST00000481641 BAIAP2L1Q9UHR4 511 aa16.78■□□□□ 0.28
CLK1-211ENST00000481641 WBP11Q9Y2W2 641 aaKnown RBP16.78■□□□□ 0.28
CLK1-211ENST00000481641 PDPK1O15530 556 aa16.77■□□□□ 0.28
CLK1-211ENST00000481641 RGS14O43566 566 aa16.77■□□□□ 0.28
CLK1-211ENST00000481641 HCRTR2O43614 444 aa16.77■□□□□ 0.28
CLK1-211ENST00000481641 SLITRK5O94991 958 aa16.77■□□□□ 0.28
CLK1-211ENST00000481641 UTS2O95399 124 aa16.77■□□□□ 0.28
CLK1-211ENST00000481641 IL33O95760 270 aa16.77■□□□□ 0.28
CLK1-211ENST00000481641 SDC1P18827 310 aa16.77■□□□□ 0.28
CLK1-211ENST00000481641 EFNA1P20827 205 aaPredicted RBP16.77■□□□□ 0.28
CLK1-211ENST00000481641 PRPH2P23942 346 aa16.77■□□□□ 0.28
CLK1-211ENST00000481641 CPA2P48052 419 aa16.77■□□□□ 0.28
CLK1-211ENST00000481641 SUCLG1P53597 346 aaKnown RBP16.77■□□□□ 0.28
CLK1-211ENST00000481641 ZNHIT3Q15649 155 aaPredicted RBP16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms