RNA–Protein interactions for RNA: ENST00000481040.1

COPA-203, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 3

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-203ENST00000481040 PRICKLE1Q96MT3 831 aaPredicted RBP4.53□□□□□ -1.68
COPA-203ENST00000481040 RBM14Q96PK6 669 aaKnown RBP4.53□□□□□ -1.68
COPA-203ENST00000481040 ALKBH3Q96Q83 286 aaPredicted RBP4.53□□□□□ -1.68
COPA-203ENST00000481040 FEM1AQ9BSK4 669 aa4.53□□□□□ -1.68
COPA-203ENST00000481040 FUCA2Q9BTY2 467 aa4.53□□□□□ -1.68
COPA-203ENST00000481040 GPR174Q9BXC1 333 aa4.53□□□□□ -1.68
COPA-203ENST00000481040 CLSTN2Q9H4D0 955 aa4.53□□□□□ -1.68
COPA-203ENST00000481040 C6orf106Q9H6K1 298 aaPredicted RBP4.53□□□□□ -1.68
COPA-203ENST00000481040 MTHFD2LQ9H903 347 aaPredicted RBP4.53□□□□□ -1.68
COPA-203ENST00000481040 ZFP57Q9NU63 452 aa4.53□□□□□ -1.68
COPA-203ENST00000481040 MRPL39Q9NYK5 338 aaKnown RBP4.53□□□□□ -1.68
COPA-203ENST00000481040 THEGQ9P2T0 379 aa4.53□□□□□ -1.68
COPA-203ENST00000481040 EIF3KQ9UBQ5 218 aaKnown RBP4.53□□□□□ -1.68
COPA-203ENST00000481040 LNPEPQ9UIQ6 1025 aa4.53□□□□□ -1.68
COPA-203ENST00000481040 EXOSC1Q9Y3B2 195 aaKnown RBP4.53□□□□□ -1.68
COPA-203ENST00000481040 COL3A1P02461 1466 aaPredicted RBP4.52□□□□□ -1.69
COPA-203ENST00000481040 IGHV4-4A0A075B6R2 117 aa4.52□□□□□ -1.69
COPA-203ENST00000481040 A0A0G2JLW4 131 aa4.52□□□□□ -1.69
COPA-203ENST00000481040 IQCMA0A1B0GVH7 501 aa4.52□□□□□ -1.69
COPA-203ENST00000481040 A0A1B0GVL5 298 aa4.52□□□□□ -1.69
COPA-203ENST00000481040 BTBD17A6NE02 478 aa4.52□□□□□ -1.69
COPA-203ENST00000481040 SMIM1B2RUZ4 78 aa4.52□□□□□ -1.69
COPA-203ENST00000481040 K7ERI5 159 aa4.52□□□□□ -1.69
COPA-203ENST00000481040 OR7A17O14581 309 aa4.52□□□□□ -1.69
COPA-203ENST00000481040 EFNA2O43921 213 aa4.52□□□□□ -1.69
COPA-203ENST00000481040 CEACAM4O75871 244 aa4.52□□□□□ -1.69
COPA-203ENST00000481040 SORBS2O94875 1100 aaKnown RBP4.52□□□□□ -1.69
COPA-203ENST00000481040 PGK1P00558 417 aa4.52□□□□□ -1.69
COPA-203ENST00000481040 ERVK-10P10266 1014 aa4.52□□□□□ -1.69
COPA-203ENST00000481040 POU2F1P14859 743 aa4.52□□□□□ -1.69
COPA-203ENST00000481040 XRCC1P18887 633 aaPredicted RBP4.52□□□□□ -1.69
COPA-203ENST00000481040 PGCP20142 388 aa4.52□□□□□ -1.69
COPA-203ENST00000481040 CDKN2AP42771 156 aaKnown RBP4.52□□□□□ -1.69
COPA-203ENST00000481040 SYKP43405 635 aa4.52□□□□□ -1.69
COPA-203ENST00000481040 AP3M2P53677 418 aa4.52□□□□□ -1.69
COPA-203ENST00000481040 PEX3P56589 373 aa4.52□□□□□ -1.69
COPA-203ENST00000481040 RPS27AP62979 156 aaKnown RBP4.52□□□□□ -1.69
COPA-203ENST00000481040 NTHL1P78549 312 aa4.52□□□□□ -1.69
COPA-203ENST00000481040 IFT88Q13099 833 aa4.52□□□□□ -1.69
COPA-203ENST00000481040 DPYSL2Q16555 572 aa4.52□□□□□ -1.69
COPA-203ENST00000481040 HADHQ16836 314 aaKnown RBP4.52□□□□□ -1.69
COPA-203ENST00000481040 LRRC66Q68CR7 880 aa4.52□□□□□ -1.69
COPA-203ENST00000481040 NADSYN1Q6IA69 706 aa4.52□□□□□ -1.69
COPA-203ENST00000481040 GCNT7Q6ZNI0 430 aa4.52□□□□□ -1.69
COPA-203ENST00000481040 C9orf139Q6ZV77 190 aa4.52□□□□□ -1.69
COPA-203ENST00000481040 CYS1Q717R9 158 aa4.52□□□□□ -1.69
COPA-203ENST00000481040 BIVMQ86UB2 503 aa4.52□□□□□ -1.69
COPA-203ENST00000481040 HOGA1Q86XE5 327 aa4.52□□□□□ -1.69
COPA-203ENST00000481040 LSMEM2Q8N112 164 aa4.52□□□□□ -1.69
COPA-203ENST00000481040 SPATA4Q8NEY3 305 aa4.52□□□□□ -1.69
COPA-203ENST00000481040 SLC22A8Q8TCC7 542 aa4.52□□□□□ -1.69
COPA-203ENST00000481040 TADA1Q96BN2 335 aa4.52□□□□□ -1.69
COPA-203ENST00000481040 AGAP3Q96P47 875 aa4.52□□□□□ -1.69
COPA-203ENST00000481040 CITED1Q99966 193 aa4.52□□□□□ -1.69
COPA-203ENST00000481040 BCL7BQ9BQE9 202 aa4.52□□□□□ -1.69
COPA-203ENST00000481040 PNNQ9H307 717 aaKnown RBP4.52□□□□□ -1.69
COPA-203ENST00000481040 LRRN3Q9H3W5 708 aa4.52□□□□□ -1.69
COPA-203ENST00000481040 FANCEQ9HB96 536 aa4.52□□□□□ -1.69
COPA-203ENST00000481040 ZNF71Q9NQZ8 489 aaPredicted RBP4.52□□□□□ -1.69
COPA-203ENST00000481040 CYTH4Q9UIA0 394 aa4.52□□□□□ -1.69
COPA-203ENST00000481040 ZNF639Q9UID6 485 aa4.52□□□□□ -1.69
COPA-203ENST00000481040 MEMO1Q9Y316 297 aa4.52□□□□□ -1.69
COPA-203ENST00000481040 MRPS18CQ9Y3D5 142 aaKnown RBP4.52□□□□□ -1.69
COPA-203ENST00000481040 MAD1L1Q9Y6D9 718 aa4.52□□□□□ -1.69
COPA-203ENST00000481040 DOCK7Q96N67 2140 aa4.52□□□□□ -1.69
COPA-203ENST00000481040 PNPLA6Q8IY17 1366 aa4.52□□□□□ -1.69
COPA-203ENST00000481040 TCP11X1B4DZS4 312 aa4.51□□□□□ -1.69
COPA-203ENST00000481040 NPIPA7E9PJI5 369 aa4.51□□□□□ -1.69
COPA-203ENST00000481040 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.51□□□□□ -1.69
COPA-203ENST00000481040 RNF13O43567 381 aa4.51□□□□□ -1.69
COPA-203ENST00000481040 DNAJB6O75190 326 aa4.51□□□□□ -1.69
COPA-203ENST00000481040 PDE5AO76074 875 aa4.51□□□□□ -1.69
COPA-203ENST00000481040 CRYAAP02489 173 aa4.51□□□□□ -1.69
COPA-203ENST00000481040 STAG3L3P0CL85 134 aa4.51□□□□□ -1.69
COPA-203ENST00000481040 NPIPA8P0DM63 369 aa4.51□□□□□ -1.69
COPA-203ENST00000481040 CYP2B6P20813 491 aa4.51□□□□□ -1.69
COPA-203ENST00000481040 UCP1P25874 307 aa4.51□□□□□ -1.69
COPA-203ENST00000481040 FCGR2CP31995 323 aa4.51□□□□□ -1.69
COPA-203ENST00000481040 BDKRB1P46663 353 aa4.51□□□□□ -1.69
COPA-203ENST00000481040 CRYBA2P53672 197 aa4.51□□□□□ -1.69
COPA-203ENST00000481040 HAND2P61296 217 aa4.51□□□□□ -1.69
COPA-203ENST00000481040 EIF2B1Q14232 305 aaKnown RBP4.51□□□□□ -1.69
COPA-203ENST00000481040 MTF1Q14872 753 aa4.51□□□□□ -1.69
COPA-203ENST00000481040 EMC2Q15006 297 aa4.51□□□□□ -1.69
COPA-203ENST00000481040 CYBRD1Q53TN4 286 aa4.51□□□□□ -1.69
COPA-203ENST00000481040 PDZK1Q5T2W1 519 aa4.51□□□□□ -1.69
COPA-203ENST00000481040 SLX4IPQ5VYV7 408 aa4.51□□□□□ -1.69
COPA-203ENST00000481040 WDR25Q64LD2 544 aaPredicted RBP4.51□□□□□ -1.69
COPA-203ENST00000481040 SCYL2Q6P3W7 929 aa4.51□□□□□ -1.69
COPA-203ENST00000481040 MOB2Q70IA6 237 aa4.51□□□□□ -1.69
COPA-203ENST00000481040 TSEN54Q7Z6J9 526 aaKnown RBP4.51□□□□□ -1.69
COPA-203ENST00000481040 OR1L4Q8NGR5 311 aa4.51□□□□□ -1.69
COPA-203ENST00000481040 KCNG3Q8TAE7 436 aa4.51□□□□□ -1.69
COPA-203ENST00000481040 CNIH3Q8TBE1 160 aa4.51□□□□□ -1.69
COPA-203ENST00000481040 M1APQ8TC57 530 aa4.51□□□□□ -1.69
COPA-203ENST00000481040 GIMAP1Q8WWP7 306 aa4.51□□□□□ -1.69
COPA-203ENST00000481040 C12orf66Q96MD2 445 aa4.51□□□□□ -1.69
COPA-203ENST00000481040 ZNF778Q96MU6 729 aa4.51□□□□□ -1.69
COPA-203ENST00000481040 CHP1Q99653 195 aa4.51□□□□□ -1.69
COPA-203ENST00000481040 C19orf43Q9BQ61 176 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 144.4 ms