RNA–Protein interactions for RNA: ENST00000480562.3

ABCF3-214, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 1 (best)

Gene ABCF3, Length 1,182 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-214ENST00000480562 GAB1Q13480 694 aa17.03■□□□□ 0.32
ABCF3-214ENST00000480562 FAM153CQ494X1 144 aa17.03■□□□□ 0.32
ABCF3-214ENST00000480562 FADS6Q8N9I5 356 aa17.03■□□□□ 0.32
ABCF3-214ENST00000480562 OR2M3Q8NG83 312 aa17.03■□□□□ 0.32
ABCF3-214ENST00000480562 ACMSDQ8TDX5 336 aa17.03■□□□□ 0.32
ABCF3-214ENST00000480562 DTNBP1Q96EV8 351 aa17.03■□□□□ 0.32
ABCF3-214ENST00000480562 STMN4Q9H169 189 aaPredicted RBP17.03■□□□□ 0.32
ABCF3-214ENST00000480562 DLL4Q9NR61 685 aa17.03■□□□□ 0.32
ABCF3-214ENST00000480562 SIRT5Q9NXA8 310 aa17.03■□□□□ 0.32
ABCF3-214ENST00000480562 MED11Q9P086 117 aa17.03■□□□□ 0.32
ABCF3-214ENST00000480562 PSMC3IPQ9P2W1 217 aaPredicted RBP17.03■□□□□ 0.32
ABCF3-214ENST00000480562 POLR3HQ9Y535 204 aaPredicted RBP17.03■□□□□ 0.32
ABCF3-214ENST00000480562 A0A087WV62 115 aa17.02■□□□□ 0.32
ABCF3-214ENST00000480562 SERTM1A2A2V5 107 aa17.02■□□□□ 0.32
ABCF3-214ENST00000480562 H0YC42 278 aa17.02■□□□□ 0.32
ABCF3-214ENST00000480562 FADS1O60427 444 aa17.02■□□□□ 0.32
ABCF3-214ENST00000480562 COQ9O75208 318 aa17.02■□□□□ 0.32
ABCF3-214ENST00000480562 GSTA1P08263 222 aa17.02■□□□□ 0.32
ABCF3-214ENST00000480562 HK1P19367 917 aa17.02■□□□□ 0.32
ABCF3-214ENST00000480562 GSTM5P46439 218 aa17.02■□□□□ 0.32
ABCF3-214ENST00000480562 DIO3P55073 304 aa17.02■□□□□ 0.32
ABCF3-214ENST00000480562 TPD52P55327 224 aaPredicted RBP17.02■□□□□ 0.32
ABCF3-214ENST00000480562 SLC29A2Q14542 456 aa17.02■□□□□ 0.32
ABCF3-214ENST00000480562 BCL2A1Q16548 175 aa17.02■□□□□ 0.32
ABCF3-214ENST00000480562 IMPG1Q17R60 797 aa17.02■□□□□ 0.32
ABCF3-214ENST00000480562 KRTAP21-3Q3LHN1 58 aa17.02■□□□□ 0.32
ABCF3-214ENST00000480562 RAET1LQ5VY80 246 aa17.02■□□□□ 0.32
ABCF3-214ENST00000480562 FAM71E1Q6IPT2 247 aa17.02■□□□□ 0.32
ABCF3-214ENST00000480562 CHMP1BQ7LBR1 199 aa17.02■□□□□ 0.32
ABCF3-214ENST00000480562 IFT20Q8IY31 132 aa17.02■□□□□ 0.32
ABCF3-214ENST00000480562 CNEP1R1Q8N9A8 125 aa17.02■□□□□ 0.32
ABCF3-214ENST00000480562 WFDC11Q8NEX6 87 aa17.02■□□□□ 0.32
ABCF3-214ENST00000480562 OR5M1Q8NGP8 315 aa17.02■□□□□ 0.32
ABCF3-214ENST00000480562 MZB1Q8WU39 189 aa17.02■□□□□ 0.32
ABCF3-214ENST00000480562 RTN4RQ9BZR6 473 aa17.02■□□□□ 0.32
ABCF3-214ENST00000480562 GLIPR2Q9H4G4 154 aa17.02■□□□□ 0.32
ABCF3-214ENST00000480562 MIEF1Q9NQG6 463 aa17.02■□□□□ 0.32
ABCF3-214ENST00000480562 C19orf53Q9UNZ5 99 aaPredicted RBP17.02■□□□□ 0.32
ABCF3-214ENST00000480562 NAV3Q8IVL0 2385 aa17.01■□□□□ 0.31
ABCF3-214ENST00000480562 A0A1W2PPM1 405 aa17.01■□□□□ 0.31
ABCF3-214ENST00000480562 SLC22A20A6NK97 555 aa17.01■□□□□ 0.31
ABCF3-214ENST00000480562 G3V2L1 256 aa17.01■□□□□ 0.31
ABCF3-214ENST00000480562 UPK1AO00322 258 aa17.01■□□□□ 0.31
ABCF3-214ENST00000480562 CASKO14936 926 aa17.01■□□□□ 0.31
ABCF3-214ENST00000480562 SMNDC1O75940 238 aaKnown RBP eCLIP17.01■□□□□ 0.31
ABCF3-214ENST00000480562 GOSR1O95249 250 aa17.01■□□□□ 0.31
ABCF3-214ENST00000480562 PEPDP12955 493 aa17.01■□□□□ 0.31
ABCF3-214ENST00000480562 HOXB4P17483 251 aaPredicted RBP17.01■□□□□ 0.31
ABCF3-214ENST00000480562 RFX3P48380 749 aa17.01■□□□□ 0.31
ABCF3-214ENST00000480562 SUCLG1P53597 346 aaKnown RBP17.01■□□□□ 0.31
ABCF3-214ENST00000480562 CLDN15P56746 228 aa17.01■□□□□ 0.31
ABCF3-214ENST00000480562 EEF1A1P68104 462 aaKnown RBP17.01■□□□□ 0.31
ABCF3-214ENST00000480562 FAM27E3Q08E93 113 aa17.01■□□□□ 0.31
ABCF3-214ENST00000480562 CYP27C1Q4G0S4 372 aa17.01■□□□□ 0.31
ABCF3-214ENST00000480562 EEF1A1P5Q5VTE0 462 aa17.01■□□□□ 0.31
ABCF3-214ENST00000480562 VWA1Q6PCB0 445 aa17.01■□□□□ 0.31
ABCF3-214ENST00000480562 ZYG11AQ6WRX3 759 aa17.01■□□□□ 0.31
ABCF3-214ENST00000480562 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.01■□□□□ 0.314e-7■■■■■ 32.3
ABCF3-214ENST00000480562 FIG4Q92562 907 aa17.01■□□□□ 0.31
ABCF3-214ENST00000480562 STARD4Q96DR4 205 aa17.01■□□□□ 0.31
ABCF3-214ENST00000480562 SHCBP1LQ9BZQ2 653 aa17.01■□□□□ 0.31
ABCF3-214ENST00000480562 TNFRSF12AQ9NP84 129 aa17.01■□□□□ 0.31
ABCF3-214ENST00000480562 MYNNQ9NPC7 610 aa17.01■□□□□ 0.31
ABCF3-214ENST00000480562 DDX18Q9NVP1 670 aaKnown RBP17.01■□□□□ 0.31
ABCF3-214ENST00000480562 DCDC2Q9UHG0 476 aa17.01■□□□□ 0.31
ABCF3-214ENST00000480562 GRID1Q9ULK0 1009 aa17.01■□□□□ 0.31
ABCF3-214ENST00000480562 ZNF337Q9Y3M9 751 aa17.01■□□□□ 0.31
ABCF3-214ENST00000480562 MSTNO14793 375 aa17■□□□□ 0.31
ABCF3-214ENST00000480562 SEC14L5O43304 696 aa17■□□□□ 0.31
ABCF3-214ENST00000480562 CRCPO75575 148 aa17■□□□□ 0.31
ABCF3-214ENST00000480562 MYL2P10916 166 aa17■□□□□ 0.31
ABCF3-214ENST00000480562 CD53P19397 219 aa17■□□□□ 0.31
ABCF3-214ENST00000480562 NTSP30990 170 aa17■□□□□ 0.31
ABCF3-214ENST00000480562 DECR1Q16698 335 aa17■□□□□ 0.31
ABCF3-214ENST00000480562 BTLAQ7Z6A9 289 aa17■□□□□ 0.31
ABCF3-214ENST00000480562 MARCH3Q86UD3 253 aa17■□□□□ 0.31
ABCF3-214ENST00000480562 MEIOBQ8N635 442 aa17■□□□□ 0.31
ABCF3-214ENST00000480562 DUSP19Q8WTR2 217 aa17■□□□□ 0.31
ABCF3-214ENST00000480562 SMPDL3BQ92485 455 aa17■□□□□ 0.31
ABCF3-214ENST00000480562 AMDHD1Q96NU7 426 aa17■□□□□ 0.31
ABCF3-214ENST00000480562 TXLNGYQ9BZA5 131 aa17■□□□□ 0.31
ABCF3-214ENST00000480562 TAS2R7Q9NYW3 318 aa17■□□□□ 0.31
ABCF3-214ENST00000480562 C6orf203Q9P0P8 240 aaPredicted RBP17■□□□□ 0.31
ABCF3-214ENST00000480562 NDRG3Q9UGV2 375 aa17■□□□□ 0.31
ABCF3-214ENST00000480562 TESMINQ9Y4I5 508 aa17■□□□□ 0.31
ABCF3-214ENST00000480562 PSMG1O95456 288 aa16.99■□□□□ 0.31
ABCF3-214ENST00000480562 IL33O95760 270 aa16.99■□□□□ 0.31
ABCF3-214ENST00000480562 FOSL1P15407 271 aa16.99■□□□□ 0.31
ABCF3-214ENST00000480562 SIRPAP78324 504 aa16.99■□□□□ 0.31
ABCF3-214ENST00000480562 OR2A2Q6IF42 318 aa16.99■□□□□ 0.31
ABCF3-214ENST00000480562 NOXRED1Q6NXP6 359 aa16.99■□□□□ 0.31
ABCF3-214ENST00000480562 TRIM46Q7Z4K8 759 aa16.99■□□□□ 0.31
ABCF3-214ENST00000480562 GSPT2Q8IYD1 628 aaKnown RBP16.99■□□□□ 0.31
ABCF3-214ENST00000480562 OR2L13Q8N349 312 aa16.99■□□□□ 0.31
ABCF3-214ENST00000480562 ELP4Q96EB1 424 aa16.99■□□□□ 0.31
ABCF3-214ENST00000480562 CCDC126Q96EE4 140 aa16.99■□□□□ 0.31
ABCF3-214ENST00000480562 PGM2Q96G03 612 aa16.99■□□□□ 0.31
ABCF3-214ENST00000480562 FAM111AQ96PZ2 611 aa16.99■□□□□ 0.31
ABCF3-214ENST00000480562 RHOXF2Q9BQY4 288 aa16.99■□□□□ 0.31
ABCF3-214ENST00000480562 PINK1Q9BXM7 581 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms