RNA–Protein interactions for RNA: ENST00000479897.5

TRAPPC12-218, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 454 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-218ENST00000479897 RNF138Q8WVD3 245 aa11.57□□□□□ -0.56
TRAPPC12-218ENST00000479897 APOBEC4Q8WW27 367 aaKnown RBP11.57□□□□□ -0.56
TRAPPC12-218ENST00000479897 DIO2Q92813 273 aa11.57□□□□□ -0.56
TRAPPC12-218ENST00000479897 RMND5BQ96G75 393 aaPredicted RBP11.57□□□□□ -0.56
TRAPPC12-218ENST00000479897 TMEM19Q96HH6 336 aa11.57□□□□□ -0.56
TRAPPC12-218ENST00000479897 SDF2Q99470 211 aa11.57□□□□□ -0.56
TRAPPC12-218ENST00000479897 KCTD14Q9BQ13 255 aaPredicted RBP11.57□□□□□ -0.56
TRAPPC12-218ENST00000479897 G6PC3Q9BUM1 346 aa11.57□□□□□ -0.56
TRAPPC12-218ENST00000479897 RNF32Q9H0A6 362 aa11.57□□□□□ -0.56
TRAPPC12-218ENST00000479897 SLC38A1Q9H2H9 487 aa11.57□□□□□ -0.56
TRAPPC12-218ENST00000479897 MUC13Q9H3R2 512 aa11.57□□□□□ -0.56
TRAPPC12-218ENST00000479897 TRIM45Q9H8W5 580 aaPredicted RBP11.57□□□□□ -0.56
TRAPPC12-218ENST00000479897 CPNE5Q9HCH3 593 aa11.57□□□□□ -0.56
TRAPPC12-218ENST00000479897 SUCOQ9UBS9 1254 aaKnown RBP11.57□□□□□ -0.56
TRAPPC12-218ENST00000479897 ANGPT4Q9Y264 503 aa11.57□□□□□ -0.56
TRAPPC12-218ENST00000479897 PCDHGA9Q9Y5G4 932 aaKnown RBP11.57□□□□□ -0.56
TRAPPC12-218ENST00000479897 PCDHGA10Q9Y5H3 936 aa11.57□□□□□ -0.56
TRAPPC12-218ENST00000479897 NPFFR2Q9Y5X5 522 aa11.57□□□□□ -0.56
TRAPPC12-218ENST00000479897 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.57□□□□□ -0.56
TRAPPC12-218ENST00000479897 CACNA1GO43497 2377 aa11.57□□□□□ -0.56
TRAPPC12-218ENST00000479897 OR6C70A6NIJ9 312 aa11.56□□□□□ -0.56
TRAPPC12-218ENST00000479897 MAN1A2O60476 641 aa11.56□□□□□ -0.56
TRAPPC12-218ENST00000479897 ZNF354AO60765 605 aaPredicted RBP11.56□□□□□ -0.56
TRAPPC12-218ENST00000479897 STX11O75558 287 aa11.56□□□□□ -0.56
TRAPPC12-218ENST00000479897 IGKV1D-16P01601 117 aa11.56□□□□□ -0.56
TRAPPC12-218ENST00000479897 ITGB2P05107 769 aa11.56□□□□□ -0.56
TRAPPC12-218ENST00000479897 NGFRP08138 427 aa11.56□□□□□ -0.56
TRAPPC12-218ENST00000479897 CHRM4P08173 479 aa11.56□□□□□ -0.56
TRAPPC12-218ENST00000479897 NR2F1P10589 423 aa11.56□□□□□ -0.56
TRAPPC12-218ENST00000479897 SSR4P51571 173 aa11.56□□□□□ -0.56
TRAPPC12-218ENST00000479897 HPCAP84074 193 aa11.56□□□□□ -0.56
TRAPPC12-218ENST00000479897 CDK6Q00534 326 aa11.56□□□□□ -0.56
TRAPPC12-218ENST00000479897 SYPL1Q16563 259 aa11.56□□□□□ -0.56
TRAPPC12-218ENST00000479897 NTRK2Q16620 822 aa11.56□□□□□ -0.56
TRAPPC12-218ENST00000479897 INTS11Q5TA45 600 aaKnown RBP11.56□□□□□ -0.56
TRAPPC12-218ENST00000479897 AGAP7PQ5VUJ5 663 aa11.56□□□□□ -0.56
TRAPPC12-218ENST00000479897 REEP3Q6NUK4 255 aa11.56□□□□□ -0.56
TRAPPC12-218ENST00000479897 TMEM81Q6P7N7 255 aa11.56□□□□□ -0.56
TRAPPC12-218ENST00000479897 OPN5Q6U736 354 aa11.56□□□□□ -0.56
TRAPPC12-218ENST00000479897 IGFL2Q6UWQ7 119 aa11.56□□□□□ -0.56
TRAPPC12-218ENST00000479897 FRRS1Q6ZNA5 592 aa11.56□□□□□ -0.56
TRAPPC12-218ENST00000479897 ANKFN1Q8N957 763 aa11.56□□□□□ -0.56
TRAPPC12-218ENST00000479897 BBS10Q8TAM1 723 aa11.56□□□□□ -0.56
TRAPPC12-218ENST00000479897 MAL2Q969L2 176 aa11.56□□□□□ -0.56
TRAPPC12-218ENST00000479897 TMBIM1Q969X1 311 aa11.56□□□□□ -0.56
TRAPPC12-218ENST00000479897 MCUR1Q96AQ8 359 aa11.56□□□□□ -0.56
TRAPPC12-218ENST00000479897 SPACA9Q96E40 222 aaPredicted RBP11.56□□□□□ -0.56
TRAPPC12-218ENST00000479897 OMA1Q96E52 524 aa11.56□□□□□ -0.56
TRAPPC12-218ENST00000479897 AGAP4Q96P64 663 aa11.56□□□□□ -0.56
TRAPPC12-218ENST00000479897 LMF1Q96S06 567 aa11.56□□□□□ -0.56
TRAPPC12-218ENST00000479897 THTPAQ9BU02 230 aa11.56□□□□□ -0.56
TRAPPC12-218ENST00000479897 CDCP1Q9H5V8 836 aa11.56□□□□□ -0.56
TRAPPC12-218ENST00000479897 ZNF552Q9H707 407 aaPredicted RBP11.56□□□□□ -0.56
TRAPPC12-218ENST00000479897 RUBCNLQ9H714 662 aa11.56□□□□□ -0.56
TRAPPC12-218ENST00000479897 GPR83Q9NYM4 423 aa11.56□□□□□ -0.56
TRAPPC12-218ENST00000479897 ABI3Q9P2A4 366 aa11.56□□□□□ -0.56
TRAPPC12-218ENST00000479897 TPRP12270 2363 aaKnown RBP11.55□□□□□ -0.56
TRAPPC12-218ENST00000479897 A0A0G2JPF8 293 aa11.55□□□□□ -0.56
TRAPPC12-218ENST00000479897 A8MUI8 341 aa11.55□□□□□ -0.56
TRAPPC12-218ENST00000479897 HNRNPCL2B2RXH8 293 aa11.55□□□□□ -0.56
TRAPPC12-218ENST00000479897 HNRNPCL3B7ZW38 293 aa11.55□□□□□ -0.56
TRAPPC12-218ENST00000479897 C5orf58C9J3I9 102 aa11.55□□□□□ -0.56
TRAPPC12-218ENST00000479897 NPIPB9F8W1W9 429 aa11.55□□□□□ -0.56
TRAPPC12-218ENST00000479897 SLC28A2O43868 658 aa11.55□□□□□ -0.56
TRAPPC12-218ENST00000479897 ZIC2O95409 532 aaPredicted RBP11.55□□□□□ -0.56
TRAPPC12-218ENST00000479897 H6PDO95479 791 aa11.55□□□□□ -0.56
TRAPPC12-218ENST00000479897 HNRNPCL4P0DMR1 293 aa11.55□□□□□ -0.56
TRAPPC12-218ENST00000479897 ETS2P15036 469 aa11.55□□□□□ -0.56
TRAPPC12-218ENST00000479897 GGT1P19440 569 aa11.55□□□□□ -0.56
TRAPPC12-218ENST00000479897 RPS4Y1P22090 263 aaKnown RBP11.55□□□□□ -0.56
TRAPPC12-218ENST00000479897 ME2P23368 584 aa11.55□□□□□ -0.56
TRAPPC12-218ENST00000479897 IL12BP29460 328 aa11.55□□□□□ -0.56
TRAPPC12-218ENST00000479897 KRT20P35900 424 aa11.55□□□□□ -0.56
TRAPPC12-218ENST00000479897 PGM1P36871 562 aa11.55□□□□□ -0.56
TRAPPC12-218ENST00000479897 SOX3P41225 446 aa11.55□□□□□ -0.56
TRAPPC12-218ENST00000479897 MFAP5Q13361 173 aa11.55□□□□□ -0.56
TRAPPC12-218ENST00000479897 EFR3AQ14156 821 aa11.55□□□□□ -0.56
TRAPPC12-218ENST00000479897 ZNF791Q3KP31 576 aaPredicted RBP11.55□□□□□ -0.56
TRAPPC12-218ENST00000479897 ABHD17BQ5VST6 288 aa11.55□□□□□ -0.56
TRAPPC12-218ENST00000479897 B3GNTL1Q67FW5 361 aaPredicted RBP11.55□□□□□ -0.56
TRAPPC12-218ENST00000479897 FCRLBQ6BAA4 426 aa11.55□□□□□ -0.56
TRAPPC12-218ENST00000479897 TYW3Q6IPR3 259 aaKnown RBP11.55□□□□□ -0.56
TRAPPC12-218ENST00000479897 BORAQ6PGQ7 559 aa11.55□□□□□ -0.56
TRAPPC12-218ENST00000479897 ISLR2Q6UXK2 745 aa11.55□□□□□ -0.56
TRAPPC12-218ENST00000479897 C16orf47Q6ZP98 133 aaPredicted RBP11.55□□□□□ -0.56
TRAPPC12-218ENST00000479897 CCDC80Q76M96 950 aa11.55□□□□□ -0.56
TRAPPC12-218ENST00000479897 ULK2Q8IYT8 1036 aa11.55□□□□□ -0.56
TRAPPC12-218ENST00000479897 BEST3Q8N1M1 668 aa11.55□□□□□ -0.56
TRAPPC12-218ENST00000479897 ZNF619Q8N2I2 560 aa11.55□□□□□ -0.56
TRAPPC12-218ENST00000479897 FBXW8Q8N3Y1 598 aa11.55□□□□□ -0.56
TRAPPC12-218ENST00000479897 NFKBIDQ8NI38 313 aa11.55□□□□□ -0.56
TRAPPC12-218ENST00000479897 ASB15Q8WXK1 588 aa11.55□□□□□ -0.56
TRAPPC12-218ENST00000479897 TTC9Q92623 222 aa11.55□□□□□ -0.56
TRAPPC12-218ENST00000479897 ASB9Q96DX5 294 aa11.55□□□□□ -0.56
TRAPPC12-218ENST00000479897 SECISBP2Q96T21 854 aaKnown RBP11.55□□□□□ -0.56
TRAPPC12-218ENST00000479897 SMAD5Q99717 465 aaKnown RBP11.55□□□□□ -0.56
TRAPPC12-218ENST00000479897 TREX2Q9BQ50 279 aaPredicted RBP11.55□□□□□ -0.56
TRAPPC12-218ENST00000479897 LIN28AQ9H9Z2 209 aaKnown RBP11.55□□□□□ -0.56
TRAPPC12-218ENST00000479897 MAGEL2Q9UJ55 1249 aa11.55□□□□□ -0.56
TRAPPC12-218ENST00000479897 USP22Q9UPT9 525 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms