RNA–Protein interactions for RNA: ENST00000479602.5

DDX56-211, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-211ENST00000479602 ELAC2Q9BQ52 826 aaKnown RBP8.2□□□□□ -1.1
DDX56-211ENST00000479602 ACTRT3Q9BYD9 372 aa8.2□□□□□ -1.1
DDX56-211ENST00000479602 PAIP1Q9H074 479 aaKnown RBP8.2□□□□□ -1.1
DDX56-211ENST00000479602 SAP130Q9H0E3 1048 aa8.2□□□□□ -1.1
DDX56-211ENST00000479602 PIGUQ9H490 435 aa8.2□□□□□ -1.1
DDX56-211ENST00000479602 FOLH1BQ9HBA9 442 aa8.2□□□□□ -1.1
DDX56-211ENST00000479602 ABCG2Q9UNQ0 655 aa8.2□□□□□ -1.1
DDX56-211ENST00000479602 LIPT1Q9Y234 373 aa8.2□□□□□ -1.1
DDX56-211ENST00000479602 IGHV3-20A0A0C4DH32 117 aa8.19□□□□□ -1.1
DDX56-211ENST00000479602 HRKO00198 91 aa8.19□□□□□ -1.1
DDX56-211ENST00000479602 ANGPT2O15123 496 aa8.19□□□□□ -1.1
DDX56-211ENST00000479602 RRP9O43818 475 aaKnown RBP8.19□□□□□ -1.1
DDX56-211ENST00000479602 MAN1A2O60476 641 aa8.19□□□□□ -1.1
DDX56-211ENST00000479602 DNAJA2O60884 412 aa8.19□□□□□ -1.1
DDX56-211ENST00000479602 KCNH1O95259 989 aa8.19□□□□□ -1.1
DDX56-211ENST00000479602 RASAL1O95294 804 aa8.19□□□□□ -1.1
DDX56-211ENST00000479602 CRYABP02511 175 aaKnown RBP8.19□□□□□ -1.1
DDX56-211ENST00000479602 HMGN2P05204 90 aaKnown RBP8.19□□□□□ -1.1
DDX56-211ENST00000479602 TNNI3P19429 210 aa8.19□□□□□ -1.1
DDX56-211ENST00000479602 NCF2P19878 526 aaPredicted RBP8.19□□□□□ -1.1
DDX56-211ENST00000479602 ENDOUP21128 410 aaKnown RBP8.19□□□□□ -1.1
DDX56-211ENST00000479602 SSTR4P31391 388 aa8.19□□□□□ -1.1
DDX56-211ENST00000479602 PIGAP37287 484 aa8.19□□□□□ -1.1
DDX56-211ENST00000479602 CD96P40200 585 aa8.19□□□□□ -1.1
DDX56-211ENST00000479602 SSR4P51571 173 aa8.19□□□□□ -1.1
DDX56-211ENST00000479602 PNLIPRP2P54317 469 aa8.19□□□□□ -1.1
DDX56-211ENST00000479602 RPP38P78345 283 aaKnown RBP8.19□□□□□ -1.1
DDX56-211ENST00000479602 MRPS35P82673 323 aaKnown RBP8.19□□□□□ -1.1
DDX56-211ENST00000479602 ADORA2A-AS1P86434 159 aa8.19□□□□□ -1.1
DDX56-211ENST00000479602 ID2Q02363 134 aa8.19□□□□□ -1.1
DDX56-211ENST00000479602 GTF3C1Q12789 2109 aa8.19□□□□□ -1.1
DDX56-211ENST00000479602 GAB1Q13480 694 aa8.19□□□□□ -1.1
DDX56-211ENST00000479602 CDSNQ15517 529 aa8.19□□□□□ -1.1
DDX56-211ENST00000479602 TESK1Q15569 626 aa8.19□□□□□ -1.1
DDX56-211ENST00000479602 LTB4RQ15722 352 aa8.19□□□□□ -1.1
DDX56-211ENST00000479602 FXNQ16595 210 aa8.19□□□□□ -1.1
DDX56-211ENST00000479602 HYAL4Q2M3T9 481 aa8.19□□□□□ -1.1
DDX56-211ENST00000479602 ZNF750Q32MQ0 723 aa8.19□□□□□ -1.1
DDX56-211ENST00000479602 ZNF791Q3KP31 576 aaPredicted RBP8.19□□□□□ -1.1
DDX56-211ENST00000479602 AGKQ53H12 422 aa8.19□□□□□ -1.1
DDX56-211ENST00000479602 ABHD17BQ5VST6 288 aa8.19□□□□□ -1.1
DDX56-211ENST00000479602 FAAH2Q6GMR7 532 aa8.19□□□□□ -1.1
DDX56-211ENST00000479602 TMEM107Q6UX40 140 aa8.19□□□□□ -1.1
DDX56-211ENST00000479602 ANKRD46Q86W74 232 aa8.19□□□□□ -1.1
DDX56-211ENST00000479602 ZNF227Q86WZ6 799 aa8.19□□□□□ -1.1
DDX56-211ENST00000479602 MCEMP1Q8IX19 187 aa8.19□□□□□ -1.1
DDX56-211ENST00000479602 ZNF808Q8N4W9 903 aaPredicted RBP8.19□□□□□ -1.1
DDX56-211ENST00000479602 POGLUT1Q8NBL1 392 aa8.19□□□□□ -1.1
DDX56-211ENST00000479602 NUP43Q8NFH3 380 aa8.19□□□□□ -1.1
DDX56-211ENST00000479602 OR52R1Q8NGF1 315 aa8.19□□□□□ -1.1
DDX56-211ENST00000479602 OR52N2Q8NGI0 321 aa8.19□□□□□ -1.1
DDX56-211ENST00000479602 SLC35B4Q969S0 331 aa8.19□□□□□ -1.1
DDX56-211ENST00000479602 PPWD1Q96BP3 646 aaKnown RBP8.19□□□□□ -1.1
DDX56-211ENST00000479602 SPACA9Q96E40 222 aaPredicted RBP8.19□□□□□ -1.1
DDX56-211ENST00000479602 RASL10BQ96S79 203 aa8.19□□□□□ -1.1
DDX56-211ENST00000479602 SH3GL1Q99961 368 aa8.19□□□□□ -1.1
DDX56-211ENST00000479602 CNPPD1Q9BV87 410 aa8.19□□□□□ -1.1
DDX56-211ENST00000479602 TMEM38AQ9H6F2 299 aa8.19□□□□□ -1.1
DDX56-211ENST00000479602 Q9N2J8 555 aa8.19□□□□□ -1.1
DDX56-211ENST00000479602 ZCCHC3Q9NUD5 404 aaKnown RBP8.19□□□□□ -1.1
DDX56-211ENST00000479602 NDE1Q9NXR1 346 aa8.19□□□□□ -1.1
DDX56-211ENST00000479602 CNIH4Q9P003 139 aa8.19□□□□□ -1.1
DDX56-211ENST00000479602 CCDC167Q9P0B6 97 aa8.19□□□□□ -1.1
DDX56-211ENST00000479602 MRTO4Q9UKD2 239 aaKnown RBP8.19□□□□□ -1.1
DDX56-211ENST00000479602 DSPPQ9NZW4 1301 aa8.19□□□□□ -1.1
DDX56-211ENST00000479602 NIPBLQ6KC79 2804 aaeCLIP8.19□□□□□ -1.1
DDX56-211ENST00000479602 IGLV3-32A0A0A0MS00 114 aa8.18□□□□□ -1.1
DDX56-211ENST00000479602 RNF103-CHMP3A0A140T963 221 aa8.18□□□□□ -1.1
DDX56-211ENST00000479602 A0A1W2PQD3 144 aa8.18□□□□□ -1.1
DDX56-211ENST00000479602 PRSS44E7EML9 344 aa8.18□□□□□ -1.1
DDX56-211ENST00000479602 NPIPB9F8W1W9 429 aa8.18□□□□□ -1.1
DDX56-211ENST00000479602 ADAM10O14672 748 aa8.18□□□□□ -1.1
DDX56-211ENST00000479602 PRKNO60260 465 aaPredicted RBP8.18□□□□□ -1.1
DDX56-211ENST00000479602 TSPAN2O60636 221 aa8.18□□□□□ -1.1
DDX56-211ENST00000479602 HNRNPCL1O60812 293 aaKnown RBP8.18□□□□□ -1.1
DDX56-211ENST00000479602 ITGA10O75578 1167 aa8.18□□□□□ -1.1
DDX56-211ENST00000479602 PPM1BO75688 479 aa8.18□□□□□ -1.1
DDX56-211ENST00000479602 NEURL1O76050 574 aa8.18□□□□□ -1.1
DDX56-211ENST00000479602 UNC5CO95185 931 aa8.18□□□□□ -1.1
DDX56-211ENST00000479602 IL33O95760 270 aa8.18□□□□□ -1.1
DDX56-211ENST00000479602 F10P00742 488 aa8.18□□□□□ -1.1
DDX56-211ENST00000479602 ABCD3P28288 659 aa8.18□□□□□ -1.1
DDX56-211ENST00000479602 GPC1P35052 558 aa8.18□□□□□ -1.1
DDX56-211ENST00000479602 PTGER4P35408 488 aa8.18□□□□□ -1.1
DDX56-211ENST00000479602 ADH7P40394 386 aa8.18□□□□□ -1.1
DDX56-211ENST00000479602 CYB561P49447 251 aa8.18□□□□□ -1.1
DDX56-211ENST00000479602 KHKP50053 298 aa8.18□□□□□ -1.1
DDX56-211ENST00000479602 DGKQP52824 942 aa8.18□□□□□ -1.1
DDX56-211ENST00000479602 RBBP4Q09028 425 aa8.18□□□□□ -1.1
DDX56-211ENST00000479602 HSPB3Q12988 150 aa8.18□□□□□ -1.1
DDX56-211ENST00000479602 TP53BP2Q13625 1128 aa8.18□□□□□ -1.1
DDX56-211ENST00000479602 TUBA3CQ13748 450 aa8.18□□□□□ -1.1
DDX56-211ENST00000479602 CYLC2Q14093 348 aaPredicted RBP8.18□□□□□ -1.1
DDX56-211ENST00000479602 EFR3AQ14156 821 aa8.18□□□□□ -1.1
DDX56-211ENST00000479602 GNA13Q14344 377 aa8.18□□□□□ -1.1
DDX56-211ENST00000479602 ZSWIM7Q19AV6 140 aa8.18□□□□□ -1.1
DDX56-211ENST00000479602 PGS1Q32NB8 556 aa8.18□□□□□ -1.1
DDX56-211ENST00000479602 KRTCAP3Q53RY4 240 aa8.18□□□□□ -1.1
DDX56-211ENST00000479602 HLA-DQA1Q5Y7H0 255 aa8.18□□□□□ -1.1
DDX56-211ENST00000479602 ANKRD26P1Q6NSI1 321 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms