RNA–Protein interactions for RNA: ENST00000479177.1

USP48-208, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-208ENST00000479177 DDX18Q9NVP1 670 aaKnown RBP6.19□□□□□ -1.42
USP48-208ENST00000479177 FOXJ2Q9P0K8 574 aa6.19□□□□□ -1.42
USP48-208ENST00000479177 PTGFRNQ9P2B2 879 aa6.19□□□□□ -1.42
USP48-208ENST00000479177 IFT80Q9P2H3 777 aaPredicted RBP6.19□□□□□ -1.42
USP48-208ENST00000479177 ZNF639Q9UID6 485 aa6.19□□□□□ -1.42
USP48-208ENST00000479177 NXT1Q9UKK6 140 aaKnown RBP6.19□□□□□ -1.42
USP48-208ENST00000479177 C19orf53Q9UNZ5 99 aaPredicted RBP6.19□□□□□ -1.42
USP48-208ENST00000479177 POMPQ9Y244 141 aa6.19□□□□□ -1.42
USP48-208ENST00000479177 PCDHGA8Q9Y5G5 932 aa6.19□□□□□ -1.42
USP48-208ENST00000479177 SNX13Q9Y5W8 968 aa6.19□□□□□ -1.42
USP48-208ENST00000479177 ACACAQ13085 2346 aa6.19□□□□□ -1.42
USP48-208ENST00000479177 CHD8Q9HCK8 2581 aa6.18□□□□□ -1.42
USP48-208ENST00000479177 FAM149AA5PLN7 773 aa6.18□□□□□ -1.42
USP48-208ENST00000479177 IDSB3KWA1 339 aa6.18□□□□□ -1.42
USP48-208ENST00000479177 HRKO00198 91 aa6.18□□□□□ -1.42
USP48-208ENST00000479177 COQ9O75208 318 aa6.18□□□□□ -1.42
USP48-208ENST00000479177 KCNK5O95279 499 aa6.18□□□□□ -1.42
USP48-208ENST00000479177 CLPSP04118 112 aa6.18□□□□□ -1.42
USP48-208ENST00000479177 KLK3P07288 261 aaPredicted RBP6.18□□□□□ -1.42
USP48-208ENST00000479177 PRKCAP17252 672 aa6.18□□□□□ -1.42
USP48-208ENST00000479177 GGT1P19440 569 aa6.18□□□□□ -1.42
USP48-208ENST00000479177 S1PR1P21453 382 aa6.18□□□□□ -1.42
USP48-208ENST00000479177 SLC5A2P31639 672 aa6.18□□□□□ -1.42
USP48-208ENST00000479177 CRATP43155 626 aa6.18□□□□□ -1.42
USP48-208ENST00000479177 MAN2A2P49641 1150 aa6.18□□□□□ -1.42
USP48-208ENST00000479177 CASP9P55211 416 aa6.18□□□□□ -1.42
USP48-208ENST00000479177 DSTNP60981 165 aa6.18□□□□□ -1.42
USP48-208ENST00000479177 ACTR3P61158 418 aa6.18□□□□□ -1.42
USP48-208ENST00000479177 TXNL4AP83876 142 aaKnown RBP6.18□□□□□ -1.42
USP48-208ENST00000479177 EEF1A2Q05639 463 aaKnown RBP6.18□□□□□ -1.42
USP48-208ENST00000479177 FUT7Q11130 342 aa6.18□□□□□ -1.42
USP48-208ENST00000479177 MAP4K2Q12851 820 aa6.18□□□□□ -1.42
USP48-208ENST00000479177 ZNF155Q12901 538 aaPredicted RBP6.18□□□□□ -1.42
USP48-208ENST00000479177 TRAP1Q12931 704 aaKnown RBP6.18□□□□□ -1.42
USP48-208ENST00000479177 BIKQ13323 160 aa6.18□□□□□ -1.42
USP48-208ENST00000479177 CCNIQ14094 377 aa6.18□□□□□ -1.42
USP48-208ENST00000479177 FLOT2Q14254 428 aa6.18□□□□□ -1.42
USP48-208ENST00000479177 TRIM25Q14258 630 aaKnown RBP6.18□□□□□ -1.42
USP48-208ENST00000479177 LASP1Q14847 261 aaKnown RBP6.18□□□□□ -1.42
USP48-208ENST00000479177 EXOSC7Q15024 291 aaKnown RBP6.18□□□□□ -1.42
USP48-208ENST00000479177 NCF4Q15080 339 aa6.18□□□□□ -1.42
USP48-208ENST00000479177 ELAVL1Q15717 326 aaKnown RBP6.18□□□□□ -1.42
USP48-208ENST00000479177 TRMT12Q53H54 448 aaKnown RBP6.18□□□□□ -1.42
USP48-208ENST00000479177 C6orf163Q5TEZ5 329 aa6.18□□□□□ -1.42
USP48-208ENST00000479177 LCN8Q6JVE9 175 aa6.18□□□□□ -1.42
USP48-208ENST00000479177 MFSD12Q6NUT3 480 aa6.18□□□□□ -1.42
USP48-208ENST00000479177 TNFAIP8L2Q6P589 184 aaPredicted RBP6.18□□□□□ -1.42
USP48-208ENST00000479177 ERICH5Q6P6B1 374 aa6.18□□□□□ -1.42
USP48-208ENST00000479177 SHISA6Q6ZSJ9 500 aa6.18□□□□□ -1.42
USP48-208ENST00000479177 LANCL3Q6ZV70 420 aa6.18□□□□□ -1.42
USP48-208ENST00000479177 C6orf120Q7Z4R8 191 aa6.18□□□□□ -1.42
USP48-208ENST00000479177 IFNEQ86WN2 208 aa6.18□□□□□ -1.42
USP48-208ENST00000479177 MARCH9Q86YJ5 346 aa6.18□□□□□ -1.42
USP48-208ENST00000479177 LGI4Q8N135 537 aa6.18□□□□□ -1.42
USP48-208ENST00000479177 HORMAD2Q8N7B1 307 aa6.18□□□□□ -1.42
USP48-208ENST00000479177 SIMC1Q8NDZ2 872 aa6.18□□□□□ -1.42
USP48-208ENST00000479177 PLPP5Q8NEB5 264 aa6.18□□□□□ -1.42
USP48-208ENST00000479177 C7orf57Q8NEG2 295 aa6.18□□□□□ -1.42
USP48-208ENST00000479177 NUP43Q8NFH3 380 aa6.18□□□□□ -1.42
USP48-208ENST00000479177 FBXO30Q8TB52 745 aa6.18□□□□□ -1.42
USP48-208ENST00000479177 DOK4Q8TEW6 326 aa6.18□□□□□ -1.42
USP48-208ENST00000479177 RIT1Q92963 219 aa6.18□□□□□ -1.42
USP48-208ENST00000479177 RCC1LQ96I51 464 aaKnown RBP6.18□□□□□ -1.42
USP48-208ENST00000479177 MAGED4Q96JG8 741 aa6.18□□□□□ -1.42
USP48-208ENST00000479177 B3GNT4Q9C0J1 378 aa6.18□□□□□ -1.42
USP48-208ENST00000479177 PCDHAC1Q9H158 963 aa6.18□□□□□ -1.42
USP48-208ENST00000479177 OR51I1Q9H343 314 aa6.18□□□□□ -1.42
USP48-208ENST00000479177 PIF1Q9H611 641 aa6.18□□□□□ -1.42
USP48-208ENST00000479177 TMEM38AQ9H6F2 299 aa6.18□□□□□ -1.42
USP48-208ENST00000479177 ANKRA2Q9H9E1 313 aa6.18□□□□□ -1.42
USP48-208ENST00000479177 C3orf14Q9HBI5 128 aa6.18□□□□□ -1.42
USP48-208ENST00000479177 A4GALTQ9NPC4 353 aa6.18□□□□□ -1.42
USP48-208ENST00000479177 ADAP2Q9NPF8 381 aa6.18□□□□□ -1.42
USP48-208ENST00000479177 DLL3Q9NYJ7 618 aa6.18□□□□□ -1.42
USP48-208ENST00000479177 ACTR3BQ9P1U1 418 aa6.18□□□□□ -1.42
USP48-208ENST00000479177 MAGEL2Q9UJ55 1249 aa6.18□□□□□ -1.42
USP48-208ENST00000479177 C3orf18Q9UK00 162 aa6.18□□□□□ -1.42
USP48-208ENST00000479177 EMC9Q9Y3B6 208 aa6.18□□□□□ -1.42
USP48-208ENST00000479177 ANKRD11Q6UB99 2663 aaPredicted RBP6.18□□□□□ -1.42
USP48-208ENST00000479177 ELOVL7A1L3X0 281 aa6.17□□□□□ -1.42
USP48-208ENST00000479177 C17orf105B2RV13 164 aa6.17□□□□□ -1.42
USP48-208ENST00000479177 H0YHG0 523 aa6.17□□□□□ -1.42
USP48-208ENST00000479177 HMGN4O00479 90 aa6.17□□□□□ -1.42
USP48-208ENST00000479177 ASNA1O43681 348 aa6.17□□□□□ -1.42
USP48-208ENST00000479177 SUSD5O60279 629 aa6.17□□□□□ -1.42
USP48-208ENST00000479177 PRAMEF2O60811 474 aa6.17□□□□□ -1.42
USP48-208ENST00000479177 ALOX12BO75342 701 aa6.17□□□□□ -1.42
USP48-208ENST00000479177 NME6O75414 186 aaPredicted RBP6.17□□□□□ -1.42
USP48-208ENST00000479177 TNFSF15O95150 251 aa6.17□□□□□ -1.42
USP48-208ENST00000479177 DDAH2O95865 285 aa6.17□□□□□ -1.42
USP48-208ENST00000479177 IGKV3-11P04433 115 aa6.17□□□□□ -1.42
USP48-208ENST00000479177 IFNA16P05015 189 aa6.17□□□□□ -1.42
USP48-208ENST00000479177 HMGN2P05204 90 aaKnown RBP6.17□□□□□ -1.42
USP48-208ENST00000479177 C8BP07358 591 aa6.17□□□□□ -1.42
USP48-208ENST00000479177 HEXBP07686 556 aa6.17□□□□□ -1.42
USP48-208ENST00000479177 UMODP07911 640 aa6.17□□□□□ -1.42
USP48-208ENST00000479177 ACP2P11117 423 aa6.17□□□□□ -1.42
USP48-208ENST00000479177 NCK1P16333 377 aa6.17□□□□□ -1.42
USP48-208ENST00000479177 MAP3K8P41279 467 aa6.17□□□□□ -1.42
USP48-208ENST00000479177 STAT5AP42229 794 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms