RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 MOGAT2Q3SYC2 334 aa3.33□□□□□ -1.88
CDC42BPA-212ENST00000478573 GPAT3Q53EU6 434 aa3.33□□□□□ -1.88
CDC42BPA-212ENST00000478573 TEX35Q5T0J7 233 aa3.33□□□□□ -1.88
CDC42BPA-212ENST00000478573 OR6B2Q6IFH4 312 aa3.33□□□□□ -1.88
CDC42BPA-212ENST00000478573 NEPROQ6NW34 567 aa3.33□□□□□ -1.88
CDC42BPA-212ENST00000478573 CWC27Q6UX04 472 aaKnown RBP3.33□□□□□ -1.88
CDC42BPA-212ENST00000478573 WDR88Q6ZMY6 472 aa3.33□□□□□ -1.88
CDC42BPA-212ENST00000478573 RBM43Q6ZSC3 357 aaKnown RBP3.33□□□□□ -1.88
CDC42BPA-212ENST00000478573 PARP8Q8N3A8 854 aa3.33□□□□□ -1.88
CDC42BPA-212ENST00000478573 FAM133AQ8N9E0 248 aa3.33□□□□□ -1.88
CDC42BPA-212ENST00000478573 PRSS33Q8NF86 280 aa3.33□□□□□ -1.88
CDC42BPA-212ENST00000478573 DQX1Q8TE96 717 aaKnown RBP3.33□□□□□ -1.88
CDC42BPA-212ENST00000478573 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.33□□□□□ -1.88
CDC42BPA-212ENST00000478573 TCP11Q8WWU5 503 aa3.33□□□□□ -1.88
CDC42BPA-212ENST00000478573 P3H4Q92791 437 aa3.33□□□□□ -1.88
CDC42BPA-212ENST00000478573 POM121L2Q96KW2 1035 aa3.33□□□□□ -1.88
CDC42BPA-212ENST00000478573 CXorf58Q96LI9 332 aa3.33□□□□□ -1.88
CDC42BPA-212ENST00000478573 SAMD8Q96LT4 415 aa3.33□□□□□ -1.88
CDC42BPA-212ENST00000478573 TAAR6Q96RI8 345 aa3.33□□□□□ -1.88
CDC42BPA-212ENST00000478573 LGMNQ99538 433 aa3.33□□□□□ -1.88
CDC42BPA-212ENST00000478573 COQ7Q99807 217 aa3.33□□□□□ -1.88
CDC42BPA-212ENST00000478573 JPH2Q9BR39 696 aaPredicted RBP3.33□□□□□ -1.88
CDC42BPA-212ENST00000478573 TRIM51Q9BSJ1 452 aa3.33□□□□□ -1.88
CDC42BPA-212ENST00000478573 CABLES2Q9BTV7 478 aa3.33□□□□□ -1.88
CDC42BPA-212ENST00000478573 FUNDC2Q9BWH2 189 aa3.33□□□□□ -1.88
CDC42BPA-212ENST00000478573 SIRPDQ9H106 197 aa3.33□□□□□ -1.88
CDC42BPA-212ENST00000478573 UPF3AQ9H1J1 476 aaKnown RBP3.33□□□□□ -1.88
CDC42BPA-212ENST00000478573 PRO3102Q9H379 93 aa3.33□□□□□ -1.88
CDC42BPA-212ENST00000478573 TEX10Q9NXF1 929 aaPredicted RBP3.33□□□□□ -1.88
CDC42BPA-212ENST00000478573 ASIC3Q9UHC3 531 aa3.33□□□□□ -1.88
CDC42BPA-212ENST00000478573 ABCB11O95342 1321 aa3.33□□□□□ -1.88
CDC42BPA-212ENST00000478573 MROH7Q68CQ1 1323 aa3.33□□□□□ -1.88
CDC42BPA-212ENST00000478573 PLXNA4Q9HCM2 1894 aa3.33□□□□□ -1.88
CDC42BPA-212ENST00000478573 TRIP11Q15643 1979 aa3.32□□□□□ -1.88
CDC42BPA-212ENST00000478573 CITO14578 2027 aa3.32□□□□□ -1.88
CDC42BPA-212ENST00000478573 A0A0U1RRA0 63 aa3.32□□□□□ -1.88
CDC42BPA-212ENST00000478573 SH3PXD2BA1X283 911 aa3.32□□□□□ -1.88
CDC42BPA-212ENST00000478573 OR5H15A6NDH6 313 aa3.32□□□□□ -1.88
CDC42BPA-212ENST00000478573 ASB14A6NK59 587 aa3.32□□□□□ -1.88
CDC42BPA-212ENST00000478573 RASGRF2O14827 1237 aa3.32□□□□□ -1.88
CDC42BPA-212ENST00000478573 TFECO14948 347 aaPredicted RBP3.32□□□□□ -1.88
CDC42BPA-212ENST00000478573 DUSP11O75319 330 aaKnown RBP3.32□□□□□ -1.88
CDC42BPA-212ENST00000478573 OR6B1O95007 311 aa3.32□□□□□ -1.88
CDC42BPA-212ENST00000478573 SYNGR4O95473 234 aa3.32□□□□□ -1.88
CDC42BPA-212ENST00000478573 FHP07954 510 aa3.32□□□□□ -1.88
CDC42BPA-212ENST00000478573 HIST1H2AGP0C0S8 130 aaPredicted RBP3.32□□□□□ -1.88
CDC42BPA-212ENST00000478573 EZRP15311 586 aaKnown RBP3.32□□□□□ -1.88
CDC42BPA-212ENST00000478573 RPL9P32969 192 aaKnown RBP3.32□□□□□ -1.88
CDC42BPA-212ENST00000478573 ANP32AP39687 249 aaKnown RBP3.32□□□□□ -1.88
CDC42BPA-212ENST00000478573 HAND2P61296 217 aa3.32□□□□□ -1.88
CDC42BPA-212ENST00000478573 RBBP4Q09028 425 aa3.32□□□□□ -1.88
CDC42BPA-212ENST00000478573 TRDNQ13061 729 aa3.32□□□□□ -1.88
CDC42BPA-212ENST00000478573 CALCOCO2Q13137 446 aa3.32□□□□□ -1.88
CDC42BPA-212ENST00000478573 FASTKD3Q14CZ7 662 aaKnown RBP3.32□□□□□ -1.88
CDC42BPA-212ENST00000478573 MLF2Q15773 248 aaPredicted RBP3.32□□□□□ -1.88
CDC42BPA-212ENST00000478573 RTL6Q6ICC9 239 aa3.32□□□□□ -1.88
CDC42BPA-212ENST00000478573 TRIM65Q6PJ69 517 aa3.32□□□□□ -1.88
CDC42BPA-212ENST00000478573 FAM159AQ6UWV7 190 aa3.32□□□□□ -1.88
CDC42BPA-212ENST00000478573 ZNF730Q6ZMV8 503 aa3.32□□□□□ -1.88
CDC42BPA-212ENST00000478573 Q6ZRG5 221 aa3.32□□□□□ -1.88
CDC42BPA-212ENST00000478573 ARMCX2Q7L311 632 aa3.32□□□□□ -1.88
CDC42BPA-212ENST00000478573 CARM1Q86X55 608 aa3.32□□□□□ -1.88
CDC42BPA-212ENST00000478573 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.32□□□□□ -1.88
CDC42BPA-212ENST00000478573 RNF148Q8N7C7 305 aa3.32□□□□□ -1.88
CDC42BPA-212ENST00000478573 TRPV1Q8NER1 839 aa3.32□□□□□ -1.88
CDC42BPA-212ENST00000478573 C11orf45Q8TAV5 145 aa3.32□□□□□ -1.88
CDC42BPA-212ENST00000478573 SPPL2AQ8TCT8 520 aa3.32□□□□□ -1.88
CDC42BPA-212ENST00000478573 HIST1H2ACQ93077 130 aa3.32□□□□□ -1.88
CDC42BPA-212ENST00000478573 MRPL24Q96A35 216 aaKnown RBP3.32□□□□□ -1.88
CDC42BPA-212ENST00000478573 ATXN7L3BQ96GX2 97 aa3.32□□□□□ -1.88
CDC42BPA-212ENST00000478573 C18orf12Q96KH6 178 aa3.32□□□□□ -1.88
CDC42BPA-212ENST00000478573 AGAP4Q96P64 663 aa3.32□□□□□ -1.88
CDC42BPA-212ENST00000478573 ALKBH3Q96Q83 286 aaPredicted RBP3.32□□□□□ -1.88
CDC42BPA-212ENST00000478573 CBWD1Q9BRT8 395 aa3.32□□□□□ -1.88
CDC42BPA-212ENST00000478573 MCRIP2Q9BUT9 160 aaKnown RBP3.32□□□□□ -1.88
CDC42BPA-212ENST00000478573 CXXC4Q9H2H0 198 aa3.32□□□□□ -1.88
CDC42BPA-212ENST00000478573 GDF3Q9NR23 364 aa3.32□□□□□ -1.88
CDC42BPA-212ENST00000478573 FAM212BQ9NTI7 297 aaPredicted RBP3.32□□□□□ -1.88
CDC42BPA-212ENST00000478573 NDUFA13Q9P0J0 144 aa3.32□□□□□ -1.88
CDC42BPA-212ENST00000478573 ACTR3BQ9P1U1 418 aa3.32□□□□□ -1.88
CDC42BPA-212ENST00000478573 COPS7AQ9UBW8 275 aa3.32□□□□□ -1.88
CDC42BPA-212ENST00000478573 FRMPD4Q14CM0 1322 aa3.32□□□□□ -1.88
CDC42BPA-212ENST00000478573 SYNRGQ9UMZ2 1314 aa3.32□□□□□ -1.88
CDC42BPA-212ENST00000478573 MTCL1Q9Y4B5 1905 aaKnown RBP3.32□□□□□ -1.88
CDC42BPA-212ENST00000478573 DENND4AQ7Z401 1863 aa3.31□□□□□ -1.88
CDC42BPA-212ENST00000478573 ASTN1O14525 1302 aa3.31□□□□□ -1.88
CDC42BPA-212ENST00000478573 ELP1O95163 1332 aa3.31□□□□□ -1.88
CDC42BPA-212ENST00000478573 IGHV4-30-2A0A087WSY4 118 aa3.31□□□□□ -1.88
CDC42BPA-212ENST00000478573 ERICH2A1L162 156 aa3.31□□□□□ -1.88
CDC42BPA-212ENST00000478573 TMEM89A2RUT3 159 aa3.31□□□□□ -1.88
CDC42BPA-212ENST00000478573 E7EWF7 191 aa3.31□□□□□ -1.88
CDC42BPA-212ENST00000478573 NMT2O60551 498 aa3.31□□□□□ -1.88
CDC42BPA-212ENST00000478573 TSPAN2O60636 221 aa3.31□□□□□ -1.88
CDC42BPA-212ENST00000478573 CSO75390 466 aaKnown RBP3.31□□□□□ -1.88
CDC42BPA-212ENST00000478573 B3GALNT1O75752 331 aa3.31□□□□□ -1.88
CDC42BPA-212ENST00000478573 CABYRO75952 493 aa3.31□□□□□ -1.88
CDC42BPA-212ENST00000478573 DUS4LO95620 317 aaKnown RBP3.31□□□□□ -1.88
CDC42BPA-212ENST00000478573 SNAI1O95863 264 aaPredicted RBP3.31□□□□□ -1.88
CDC42BPA-212ENST00000478573 TGFAP01135 160 aa3.31□□□□□ -1.88
CDC42BPA-212ENST00000478573 FCER2P06734 321 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms