RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 PDE9AO76083 593 aa6.32□□□□□ -1.4
BRCA1-215ENST00000478531 CBX6O95503 412 aa6.32□□□□□ -1.4
BRCA1-215ENST00000478531 IL6P05231 212 aa6.32□□□□□ -1.4
BRCA1-215ENST00000478531 GSNP06396 782 aa6.32□□□□□ -1.4
BRCA1-215ENST00000478531 CYP4B1P13584 511 aa6.32□□□□□ -1.4
BRCA1-215ENST00000478531 GDF1P27539 372 aa6.32□□□□□ -1.4
BRCA1-215ENST00000478531 CASP3P42574 277 aa6.32□□□□□ -1.4
BRCA1-215ENST00000478531 CDKN2CP42773 168 aa6.32□□□□□ -1.4
BRCA1-215ENST00000478531 MAGEA5P43359 124 aa6.32□□□□□ -1.4
BRCA1-215ENST00000478531 PRIM2P49643 509 aa6.32□□□□□ -1.4
BRCA1-215ENST00000478531 MRPS22P82650 360 aaKnown RBP6.32□□□□□ -1.4
BRCA1-215ENST00000478531 STX5Q13190 355 aa6.32□□□□□ -1.4
BRCA1-215ENST00000478531 EFR3AQ14156 821 aa6.32□□□□□ -1.4
BRCA1-215ENST00000478531 TOMM20Q15388 145 aa6.32□□□□□ -1.4
BRCA1-215ENST00000478531 EIF2S3LQ2VIR3 472 aaKnown RBP6.32□□□□□ -1.4
BRCA1-215ENST00000478531 CYP27C1Q4G0S4 372 aa6.32□□□□□ -1.4
BRCA1-215ENST00000478531 CCNJQ5T5M9 372 aa6.32□□□□□ -1.4
BRCA1-215ENST00000478531 BHLHB9Q6PI77 547 aa6.32□□□□□ -1.4
BRCA1-215ENST00000478531 PACS2Q86VP3 889 aa6.32□□□□□ -1.4
BRCA1-215ENST00000478531 SLC22A16Q86VW1 577 aa6.32□□□□□ -1.4
BRCA1-215ENST00000478531 SIAH3Q8IW03 269 aa6.32□□□□□ -1.4
BRCA1-215ENST00000478531 OR52N2Q8NGI0 321 aa6.32□□□□□ -1.4
BRCA1-215ENST00000478531 OR5D16Q8NGK9 328 aa6.32□□□□□ -1.4
BRCA1-215ENST00000478531 PSMA8Q8TAA3 256 aa6.32□□□□□ -1.4
BRCA1-215ENST00000478531 HGDQ93099 445 aa6.32□□□□□ -1.4
BRCA1-215ENST00000478531 MOAP1Q96BY2 351 aa6.32□□□□□ -1.4
BRCA1-215ENST00000478531 TMCO6Q96DC7 493 aa6.32□□□□□ -1.4
BRCA1-215ENST00000478531 SLC35A5Q9BS91 424 aa6.32□□□□□ -1.4
BRCA1-215ENST00000478531 INPP5KQ9BT40 448 aa6.32□□□□□ -1.4
BRCA1-215ENST00000478531 ACTRT3Q9BYD9 372 aa6.32□□□□□ -1.4
BRCA1-215ENST00000478531 DEFB127Q9H1M4 99 aa6.32□□□□□ -1.4
BRCA1-215ENST00000478531 PROK2Q9HC23 129 aa6.32□□□□□ -1.4
BRCA1-215ENST00000478531 GPATCH2Q9NW75 528 aa6.32□□□□□ -1.4
BRCA1-215ENST00000478531 FLRT3Q9NZU0 649 aa6.32□□□□□ -1.4
BRCA1-215ENST00000478531 CCDC167Q9P0B6 97 aa6.32□□□□□ -1.4
BRCA1-215ENST00000478531 NTMQ9P121 344 aa6.32□□□□□ -1.4
BRCA1-215ENST00000478531 SH3BGRL2Q9UJC5 107 aa6.32□□□□□ -1.4
BRCA1-215ENST00000478531 MRTO4Q9UKD2 239 aaKnown RBP6.32□□□□□ -1.4
BRCA1-215ENST00000478531 ADGRG4Q8IZF6 3080 aa6.32□□□□□ -1.4
BRCA1-215ENST00000478531 FAM234BA2RU67 622 aa6.31□□□□□ -1.4
BRCA1-215ENST00000478531 LRRC3CA6NJW4 275 aa6.31□□□□□ -1.4
BRCA1-215ENST00000478531 C17orf51A8MQB3 221 aa6.31□□□□□ -1.4
BRCA1-215ENST00000478531 RFXANKO14593 260 aa6.31□□□□□ -1.4
BRCA1-215ENST00000478531 NKX2-2O95096 273 aa6.31□□□□□ -1.4
BRCA1-215ENST00000478531 ANP32DO95626 131 aa6.31□□□□□ -1.4
BRCA1-215ENST00000478531 IGKV1D-16P01601 117 aa6.31□□□□□ -1.4
BRCA1-215ENST00000478531 CELA3AP09093 270 aa6.31□□□□□ -1.4
BRCA1-215ENST00000478531 RFPL3SP0C7P2 107 aa6.31□□□□□ -1.4
BRCA1-215ENST00000478531 NAGAP17050 411 aa6.31□□□□□ -1.4
BRCA1-215ENST00000478531 EVI2BP34910 448 aa6.31□□□□□ -1.4
BRCA1-215ENST00000478531 ZFP36L2P47974 494 aaKnown RBP6.31□□□□□ -1.4
BRCA1-215ENST00000478531 GYS2P54840 703 aa6.31□□□□□ -1.4
BRCA1-215ENST00000478531 PSMD4P55036 377 aaKnown RBP6.31□□□□□ -1.4
BRCA1-215ENST00000478531 PSPHP78330 225 aa6.31□□□□□ -1.4
BRCA1-215ENST00000478531 POU6F2P78424 691 aaPredicted RBP6.31□□□□□ -1.4
BRCA1-215ENST00000478531 KCNC4Q03721 635 aa6.31□□□□□ -1.4
BRCA1-215ENST00000478531 FOXO1Q12778 655 aa6.31□□□□□ -1.4
BRCA1-215ENST00000478531 SQLEQ14534 574 aa6.31□□□□□ -1.4
BRCA1-215ENST00000478531 AGKQ53H12 422 aa6.31□□□□□ -1.4
BRCA1-215ENST00000478531 CMPK2Q5EBM0 449 aa6.31□□□□□ -1.4
BRCA1-215ENST00000478531 TBCELQ5QJ74 424 aa6.31□□□□□ -1.4
BRCA1-215ENST00000478531 C6orf10Q5SRN2 563 aa6.31□□□□□ -1.4
BRCA1-215ENST00000478531 CGB2Q6NT52 195 aa6.31□□□□□ -1.4
BRCA1-215ENST00000478531 CDC73Q6P1J9 531 aa6.31□□□□□ -1.4
BRCA1-215ENST00000478531 TNFAIP8L2Q6P589 184 aaPredicted RBP6.31□□□□□ -1.4
BRCA1-215ENST00000478531 ZNF621Q6ZSS3 439 aa6.31□□□□□ -1.4
BRCA1-215ENST00000478531 NUP54Q7Z3B4 507 aa6.31□□□□□ -1.4
BRCA1-215ENST00000478531 C6orf120Q7Z4R8 191 aa6.31□□□□□ -1.4
BRCA1-215ENST00000478531 TMEM251Q8N6I4 163 aa6.31□□□□□ -1.4
BRCA1-215ENST00000478531 PNPT1Q8TCS8 783 aaKnown RBP6.31□□□□□ -1.4
BRCA1-215ENST00000478531 ADAMTS15Q8TE58 950 aa6.31□□□□□ -1.4
BRCA1-215ENST00000478531 SLC35A4Q96G79 324 aa6.31□□□□□ -1.4
BRCA1-215ENST00000478531 GPR137Q96N19 417 aa6.31□□□□□ -1.4
BRCA1-215ENST00000478531 CCDC115Q96NT0 180 aa6.31□□□□□ -1.4
BRCA1-215ENST00000478531 SECISBP2Q96T21 854 aaKnown RBP6.31□□□□□ -1.4
BRCA1-215ENST00000478531 SIKE1Q9BRV8 207 aa6.31□□□□□ -1.4
BRCA1-215ENST00000478531 ZNF703Q9H7S9 590 aaPredicted RBP6.31□□□□□ -1.4
BRCA1-215ENST00000478531 IL1RL2Q9HB29 575 aa6.31□□□□□ -1.4
BRCA1-215ENST00000478531 ZFP64Q9NPA5 681 aa6.31□□□□□ -1.4
BRCA1-215ENST00000478531 B4GALT7Q9UBV7 327 aa6.31□□□□□ -1.4
BRCA1-215ENST00000478531 BTNL2Q9UIR0 455 aa6.31□□□□□ -1.4
BRCA1-215ENST00000478531 TRIM33Q9UPN9 1127 aa6.31□□□□□ -1.4
BRCA1-215ENST00000478531 OSGIN2Q9Y236 505 aa6.31□□□□□ -1.4
BRCA1-215ENST00000478531 LIPGQ9Y5X9 500 aa6.31□□□□□ -1.4
BRCA1-215ENST00000478531 CCDC154A6NI56 674 aa6.31□□□□□ -1.4
BRCA1-215ENST00000478531 TTC36A6NLP5 189 aa6.31□□□□□ -1.4
BRCA1-215ENST00000478531 ASNA1O43681 348 aa6.31□□□□□ -1.4
BRCA1-215ENST00000478531 GMFGO60234 142 aa6.31□□□□□ -1.4
BRCA1-215ENST00000478531 TRIM3O75382 744 aaPredicted RBP6.31□□□□□ -1.4
BRCA1-215ENST00000478531 TRAPPC6AO75865 159 aa6.31□□□□□ -1.4
BRCA1-215ENST00000478531 GLSO94925 669 aaPredicted RBP6.31□□□□□ -1.4
BRCA1-215ENST00000478531 KCNK2O95069 426 aa6.31□□□□□ -1.4
BRCA1-215ENST00000478531 UTS2O95399 124 aa6.31□□□□□ -1.4
BRCA1-215ENST00000478531 IL33O95760 270 aa6.31□□□□□ -1.4
BRCA1-215ENST00000478531 C1QCP02747 245 aa6.31□□□□□ -1.4
BRCA1-215ENST00000478531 KRT16P08779 473 aa6.31□□□□□ -1.4
BRCA1-215ENST00000478531 ABOP16442 354 aa6.31□□□□□ -1.4
BRCA1-215ENST00000478531 MATN1P21941 496 aa6.31□□□□□ -1.4
BRCA1-215ENST00000478531 UQCRC2P22695 453 aa6.31□□□□□ -1.4
BRCA1-215ENST00000478531 TCEA1P23193 301 aaKnown RBP6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms