RNA–Protein interactions for RNA: ENST00000478188.5

POLR2B-208, Transcript of RNA polymerase II subunit B, humanhuman

TSL 2

Gene POLR2B, Length 3,093 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2B-208ENST00000478188 OGFOD2Q6N063 350 aa3.86□□□□□ -1.79
POLR2B-208ENST00000478188 TMEM107Q6UX40 140 aa3.86□□□□□ -1.79
POLR2B-208ENST00000478188 APOOLQ6UXV4 268 aa3.86□□□□□ -1.79
POLR2B-208ENST00000478188 ZNF551Q7Z340 670 aaPredicted RBP3.86□□□□□ -1.79
POLR2B-208ENST00000478188 NUP54Q7Z3B4 507 aa3.86□□□□□ -1.79
POLR2B-208ENST00000478188 VKORC1Q9BQB6 163 aa3.86□□□□□ -1.79
POLR2B-208ENST00000478188 PNPLA3Q9NST1 481 aa3.86□□□□□ -1.79
POLR2B-208ENST00000478188 ACSS1Q9NUB1 689 aaPredicted RBP3.86□□□□□ -1.79
POLR2B-208ENST00000478188 BAIAP2L1Q9UHR4 511 aa3.86□□□□□ -1.79
POLR2B-208ENST00000478188 RAP2CQ9Y3L5 183 aa3.86□□□□□ -1.79
POLR2B-208ENST00000478188 PCDHGB3Q9Y5G1 929 aa3.86□□□□□ -1.79
POLR2B-208ENST00000478188 KLF2Q9Y5W3 355 aaPredicted RBP3.86□□□□□ -1.79
POLR2B-208ENST00000478188 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.86□□□□□ -1.79
POLR2B-208ENST00000478188 LRBAP50851 2863 aa3.86□□□□□ -1.79
POLR2B-208ENST00000478188 OTOGQ6ZRI0 2925 aa3.86□□□□□ -1.79
POLR2B-208ENST00000478188 ITPR2Q14571 2701 aa3.86□□□□□ -1.79
POLR2B-208ENST00000478188 GXYLT2A0PJZ3 443 aa3.86□□□□□ -1.79
POLR2B-208ENST00000478188 OR14I1A6ND48 311 aa3.86□□□□□ -1.79
POLR2B-208ENST00000478188 KLF11O14901 512 aa3.86□□□□□ -1.79
POLR2B-208ENST00000478188 HCRTR2O43614 444 aa3.86□□□□□ -1.79
POLR2B-208ENST00000478188 BCAS2O75934 225 aaPredicted RBP3.86□□□□□ -1.79
POLR2B-208ENST00000478188 AGFG2O95081 481 aa3.86□□□□□ -1.79
POLR2B-208ENST00000478188 NGFRP08138 427 aa3.86□□□□□ -1.79
POLR2B-208ENST00000478188 LAMP1P11279 417 aa3.86□□□□□ -1.79
POLR2B-208ENST00000478188 PRF1P14222 555 aa3.86□□□□□ -1.79
POLR2B-208ENST00000478188 IL12AP29459 219 aa3.86□□□□□ -1.79
POLR2B-208ENST00000478188 CLDN15P56746 228 aa3.86□□□□□ -1.79
POLR2B-208ENST00000478188 PSPHP78330 225 aa3.86□□□□□ -1.79
POLR2B-208ENST00000478188 EMX2Q04743 252 aa3.86□□□□□ -1.79
POLR2B-208ENST00000478188 FUT5Q11128 374 aa3.86□□□□□ -1.79
POLR2B-208ENST00000478188 ART3Q13508 389 aa3.86□□□□□ -1.79
POLR2B-208ENST00000478188 PTGR1Q14914 329 aa3.86□□□□□ -1.79
POLR2B-208ENST00000478188 NNATQ16517 81 aa3.86□□□□□ -1.79
POLR2B-208ENST00000478188 ZNF630Q2M218 657 aaPredicted RBP3.86□□□□□ -1.79
POLR2B-208ENST00000478188 AGBL2Q5U5Z8 902 aa3.86□□□□□ -1.79
POLR2B-208ENST00000478188 SLC22A10Q63ZE4 541 aa3.86□□□□□ -1.79
POLR2B-208ENST00000478188 MFSD12Q6NUT3 480 aa3.86□□□□□ -1.79
POLR2B-208ENST00000478188 FJX1Q86VR8 437 aa3.86□□□□□ -1.79
POLR2B-208ENST00000478188 MED12LQ86YW9 2145 aa3.86□□□□□ -1.79
POLR2B-208ENST00000478188 LIX1Q8N485 282 aa3.86□□□□□ -1.79
POLR2B-208ENST00000478188 ZNF808Q8N4W9 903 aaPredicted RBP3.86□□□□□ -1.79
POLR2B-208ENST00000478188 TMEM156Q8N614 296 aa3.86□□□□□ -1.79
POLR2B-208ENST00000478188 KRTCAP2Q8N6L1 136 aa3.86□□□□□ -1.79
POLR2B-208ENST00000478188 CLHC1Q8NHS4 586 aa3.86□□□□□ -1.79
POLR2B-208ENST00000478188 NEIL3Q8TAT5 605 aa3.86□□□□□ -1.79
POLR2B-208ENST00000478188 RAB3IL1Q8TBN0 382 aa3.86□□□□□ -1.79
POLR2B-208ENST00000478188 TMBIM1Q969X1 311 aa3.86□□□□□ -1.79
POLR2B-208ENST00000478188 TEX37Q96LM6 180 aa3.86□□□□□ -1.79
POLR2B-208ENST00000478188 RILPQ96NA2 401 aa3.86□□□□□ -1.79
POLR2B-208ENST00000478188 GAL3ST4Q96RP7 486 aa3.86□□□□□ -1.79
POLR2B-208ENST00000478188 TRIM8Q9BZR9 551 aa3.86□□□□□ -1.79
POLR2B-208ENST00000478188 BRINP2Q9C0B6 783 aa3.86□□□□□ -1.79
POLR2B-208ENST00000478188 STMN4Q9H169 189 aaPredicted RBP3.86□□□□□ -1.79
POLR2B-208ENST00000478188 SLC6A15Q9H2J7 730 aa3.86□□□□□ -1.79
POLR2B-208ENST00000478188 RASSF4Q9H2L5 321 aa3.86□□□□□ -1.79
POLR2B-208ENST00000478188 CXorf36Q9H7Y0 433 aa3.86□□□□□ -1.79
POLR2B-208ENST00000478188 AKTIPQ9H8T0 292 aa3.86□□□□□ -1.79
POLR2B-208ENST00000478188 GALNT9Q9HCQ5 603 aa3.86□□□□□ -1.79
POLR2B-208ENST00000478188 SLC52A3Q9NQ40 469 aa3.86□□□□□ -1.79
POLR2B-208ENST00000478188 PNPOQ9NVS9 261 aa3.86□□□□□ -1.79
POLR2B-208ENST00000478188 GIN1Q9NXP7 522 aa3.86□□□□□ -1.79
POLR2B-208ENST00000478188 SPTAN1Q13813 2472 aaKnown RBP3.86□□□□□ -1.79
POLR2B-208ENST00000478188 TMEM120BA0PK00 339 aa3.85□□□□□ -1.79
POLR2B-208ENST00000478188 PRAMEF27A3QJZ7 478 aa3.85□□□□□ -1.79
POLR2B-208ENST00000478188 PRAMEF25A6NGN4 478 aa3.85□□□□□ -1.79
POLR2B-208ENST00000478188 TFECO14948 347 aaPredicted RBP3.85□□□□□ -1.79
POLR2B-208ENST00000478188 RGS16O15492 202 aaPredicted RBP3.85□□□□□ -1.79
POLR2B-208ENST00000478188 PDPK1O15530 556 aa3.85□□□□□ -1.79
POLR2B-208ENST00000478188 ZIC3O60481 467 aa3.85□□□□□ -1.79
POLR2B-208ENST00000478188 DNAJA2O60884 412 aa3.85□□□□□ -1.79
POLR2B-208ENST00000478188 ICOSLGO75144 302 aa3.85□□□□□ -1.79
POLR2B-208ENST00000478188 ERN1O75460 977 aaKnown RBP3.85□□□□□ -1.79
POLR2B-208ENST00000478188 SNUPNO95149 360 aaKnown RBP3.85□□□□□ -1.79
POLR2B-208ENST00000478188 IL33O95760 270 aa3.85□□□□□ -1.79
POLR2B-208ENST00000478188 PSMA4P25789 261 aaKnown RBP3.85□□□□□ -1.79
POLR2B-208ENST00000478188 KIR3DL1P43629 444 aa3.85□□□□□ -1.79
POLR2B-208ENST00000478188 SLC1A6P48664 564 aa3.85□□□□□ -1.79
POLR2B-208ENST00000478188 ALDH9A1P49189 494 aa3.85□□□□□ -1.79
POLR2B-208ENST00000478188 NCBP2P52298 156 aaKnown RBP eCLIP3.85□□□□□ -1.79
POLR2B-208ENST00000478188 DLX5P56178 289 aa3.85□□□□□ -1.79
POLR2B-208ENST00000478188 NUP107P57740 925 aa3.85□□□□□ -1.79
POLR2B-208ENST00000478188 IFFO1Q0D2I5 559 aa3.85□□□□□ -1.79
POLR2B-208ENST00000478188 GAB1Q13480 694 aa3.85□□□□□ -1.79
POLR2B-208ENST00000478188 CASP8Q14790 479 aa3.85□□□□□ -1.79
POLR2B-208ENST00000478188 GUSBP1Q15486 140 aa3.85□□□□□ -1.79
POLR2B-208ENST00000478188 MAPK11Q15759 364 aa3.85□□□□□ -1.79
POLR2B-208ENST00000478188 CPEB4Q17RY0 729 aaKnown RBP eCLIP3.85□□□□□ -1.79
POLR2B-208ENST00000478188 CFAP157Q5JU67 520 aa3.85□□□□□ -1.79
POLR2B-208ENST00000478188 TIGD3Q6B0B8 471 aa3.85□□□□□ -1.79
POLR2B-208ENST00000478188 VASNQ6EMK4 673 aa3.85□□□□□ -1.79
POLR2B-208ENST00000478188 SLC30A6Q6NXT4 461 aa3.85□□□□□ -1.79
POLR2B-208ENST00000478188 RPTNQ6XPR3 784 aa3.85□□□□□ -1.79
POLR2B-208ENST00000478188 GK5Q6ZS86 529 aa3.85□□□□□ -1.79
POLR2B-208ENST00000478188 WDR53Q7Z5U6 358 aaPredicted RBP3.85□□□□□ -1.79
POLR2B-208ENST00000478188 LIX1LQ8IVB5 337 aa3.85□□□□□ -1.79
POLR2B-208ENST00000478188 SAMD14Q8IZD0 417 aaPredicted RBP3.85□□□□□ -1.79
POLR2B-208ENST00000478188 TAGAPQ8N103 731 aa3.85□□□□□ -1.79
POLR2B-208ENST00000478188 FAM98AQ8NCA5 519 aaKnown RBP3.85□□□□□ -1.79
POLR2B-208ENST00000478188 NAXEQ8NCW5 288 aa3.85□□□□□ -1.79
POLR2B-208ENST00000478188 OR7A2PQ8NGA2 310 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms