RNA–Protein interactions for RNA: ENST00000477626.5

PRPF39-203, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,507 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-203ENST00000477626 GABARAPL2P60520 117 aa11.23□□□□□ -0.61
PRPF39-203ENST00000477626 RFX4Q33E94 735 aa11.23□□□□□ -0.61
PRPF39-203ENST00000477626 RABEPKQ7Z6M1 372 aa11.23□□□□□ -0.61
PRPF39-203ENST00000477626 ZNF619Q8N2I2 560 aa11.23□□□□□ -0.61
PRPF39-203ENST00000477626 SUMF1Q8NBK3 374 aa11.23□□□□□ -0.61
PRPF39-203ENST00000477626 OR7G1Q8NGA0 311 aa11.23□□□□□ -0.61
PRPF39-203ENST00000477626 PIK3R3Q92569 461 aa11.23□□□□□ -0.61
PRPF39-203ENST00000477626 HDAC2Q92769 488 aaKnown RBP11.23□□□□□ -0.61
PRPF39-203ENST00000477626 CCDC74BQ96LY2 380 aa11.23□□□□□ -0.61
PRPF39-203ENST00000477626 MESP1Q9BRJ9 268 aa11.23□□□□□ -0.61
PRPF39-203ENST00000477626 VCXQ9H320 206 aa11.23□□□□□ -0.61
PRPF39-203ENST00000477626 MTHFD2LQ9H903 347 aaPredicted RBP11.23□□□□□ -0.61
PRPF39-203ENST00000477626 SEMA4GQ9NTN9 838 aa11.23□□□□□ -0.61
PRPF39-203ENST00000477626 DDX18Q9NVP1 670 aaKnown RBP11.23□□□□□ -0.61
PRPF39-203ENST00000477626 LAMA5O15230 3695 aa11.23□□□□□ -0.61
PRPF39-203ENST00000477626 D6RAR5 112 aa11.23□□□□□ -0.61
PRPF39-203ENST00000477626 ITGA2P17301 1181 aa11.23□□□□□ -0.61
PRPF39-203ENST00000477626 IGFBP5P24593 272 aa11.23□□□□□ -0.61
PRPF39-203ENST00000477626 SSTR4P31391 388 aa11.23□□□□□ -0.61
PRPF39-203ENST00000477626 CXCR4P61073 352 aa11.23□□□□□ -0.61
PRPF39-203ENST00000477626 CDK5R2Q13319 367 aa11.23□□□□□ -0.61
PRPF39-203ENST00000477626 NDUFA9Q16795 377 aa11.23□□□□□ -0.61
PRPF39-203ENST00000477626 KLHL26Q53HC5 615 aa11.23□□□□□ -0.61
PRPF39-203ENST00000477626 C16orf52Q8NHV5 167 aa11.23□□□□□ -0.61
PRPF39-203ENST00000477626 FKBP10Q96AY3 582 aa11.23□□□□□ -0.61
PRPF39-203ENST00000477626 ZNF607Q96SK3 696 aa11.23□□□□□ -0.61
PRPF39-203ENST00000477626 DNAJB12Q9NXW2 375 aaKnown RBP11.23□□□□□ -0.61
PRPF39-203ENST00000477626 SAMHD1Q9Y3Z3 626 aaKnown RBP11.23□□□□□ -0.61
PRPF39-203ENST00000477626 PCDHGA5Q9Y5G8 931 aa11.23□□□□□ -0.61
PRPF39-203ENST00000477626 RALGAPA1Q6GYQ0 2036 aa11.23□□□□□ -0.61
PRPF39-203ENST00000477626 ZDBF2Q9HCK1 2354 aa11.23□□□□□ -0.61
PRPF39-203ENST00000477626 DUXAA6NLW8 204 aa11.23□□□□□ -0.61
PRPF39-203ENST00000477626 PEX12O00623 359 aa11.23□□□□□ -0.61
PRPF39-203ENST00000477626 FZD7O75084 574 aa11.23□□□□□ -0.61
PRPF39-203ENST00000477626 OXSR1O95747 527 aaPredicted RBP11.23□□□□□ -0.61
PRPF39-203ENST00000477626 CD59P13987 128 aa11.23□□□□□ -0.61
PRPF39-203ENST00000477626 GSSP48637 474 aa11.23□□□□□ -0.61
PRPF39-203ENST00000477626 NPRL3Q12980 569 aa11.23□□□□□ -0.61
PRPF39-203ENST00000477626 TMEM201Q5SNT2 666 aa11.23□□□□□ -0.61
PRPF39-203ENST00000477626 LAPTM4BQ86VI4 370 aa11.23□□□□□ -0.61
PRPF39-203ENST00000477626 C9orf40Q8IXQ3 194 aa11.23□□□□□ -0.61
PRPF39-203ENST00000477626 Q8N9G6 341 aaPredicted RBP11.23□□□□□ -0.61
PRPF39-203ENST00000477626 C17orf47Q8NEP4 570 aa11.23□□□□□ -0.61
PRPF39-203ENST00000477626 PMEPA1Q969W9 287 aa11.23□□□□□ -0.61
PRPF39-203ENST00000477626 ALOXE3Q9BYJ1 711 aa11.23□□□□□ -0.61
PRPF39-203ENST00000477626 TESMINQ9Y4I5 508 aa11.23□□□□□ -0.61
PRPF39-203ENST00000477626 LOC400499M0QZD8 3231 aa11.22□□□□□ -0.61
PRPF39-203ENST00000477626 TERTO14746 1132 aaKnown RBP11.22□□□□□ -0.61
PRPF39-203ENST00000477626 GGT2P36268 569 aa11.22□□□□□ -0.61
PRPF39-203ENST00000477626 GNA13Q14344 377 aa11.22□□□□□ -0.61
PRPF39-203ENST00000477626 MAD2L1BPQ15013 274 aaPredicted RBP11.22□□□□□ -0.61
PRPF39-203ENST00000477626 APLFQ8IW19 511 aaPredicted RBP11.22□□□□□ -0.61
PRPF39-203ENST00000477626 XAGE5Q8WWM1 108 aa11.22□□□□□ -0.61
PRPF39-203ENST00000477626 RTN4RQ9BZR6 473 aa11.22□□□□□ -0.61
PRPF39-203ENST00000477626 Q9H521 79 aa11.22□□□□□ -0.61
PRPF39-203ENST00000477626 SLC25A19Q9HC21 320 aa11.22□□□□□ -0.61
PRPF39-203ENST00000477626 PLCXD1Q9NUJ7 323 aa11.22□□□□□ -0.61
PRPF39-203ENST00000477626 CEPT1Q9Y6K0 416 aa11.22□□□□□ -0.61
PRPF39-203ENST00000477626 LNP1A1A4G5 178 aa11.22□□□□□ -0.61
PRPF39-203ENST00000477626 TNFRSF11BO00300 401 aa11.22□□□□□ -0.61
PRPF39-203ENST00000477626 GMNNO75496 209 aa11.22□□□□□ -0.61
PRPF39-203ENST00000477626 AK1P00568 194 aa11.22□□□□□ -0.61
PRPF39-203ENST00000477626 IFNW1P05000 195 aa11.22□□□□□ -0.61
PRPF39-203ENST00000477626 RPLP0P05388 317 aaKnown RBP11.22□□□□□ -0.61
PRPF39-203ENST00000477626 AGXTP21549 392 aa11.22□□□□□ -0.61
PRPF39-203ENST00000477626 MST1P26927 711 aa11.22□□□□□ -0.61
PRPF39-203ENST00000477626 SLC35A2P78381 396 aa11.22□□□□□ -0.61
PRPF39-203ENST00000477626 FGFBP1Q14512 234 aa11.22□□□□□ -0.61
PRPF39-203ENST00000477626 CCNJQ5T5M9 372 aa11.22□□□□□ -0.61
PRPF39-203ENST00000477626 PWWP2BQ6NUJ5 590 aa11.22□□□□□ -0.61
PRPF39-203ENST00000477626 ZER1Q7Z7L7 766 aa11.22□□□□□ -0.61
PRPF39-203ENST00000477626 LSMEM1Q8N8F7 131 aa11.22□□□□□ -0.61
PRPF39-203ENST00000477626 RCBTB1Q8NDN9 531 aa11.22□□□□□ -0.61
PRPF39-203ENST00000477626 IFI44Q8TCB0 444 aa11.22□□□□□ -0.61
PRPF39-203ENST00000477626 VN1R1Q9GZP7 353 aa11.22□□□□□ -0.61
PRPF39-203ENST00000477626 FLRT3Q9NZU0 649 aa11.22□□□□□ -0.61
PRPF39-203ENST00000477626 KIF26BQ2KJY2 2108 aa11.22□□□□□ -0.61
PRPF39-203ENST00000477626 TTC28Q96AY4 2481 aa11.22□□□□□ -0.61
PRPF39-203ENST00000477626 ZNF292O60281 2723 aa11.22□□□□□ -0.61
PRPF39-203ENST00000477626 EIF4E1BA6NMX2 242 aaKnown RBP11.22□□□□□ -0.61
PRPF39-203ENST00000477626 GDF9O60383 454 aa11.22□□□□□ -0.61
PRPF39-203ENST00000477626 OR2B3O76000 313 aa11.22□□□□□ -0.61
PRPF39-203ENST00000477626 CYC1P08574 325 aa11.22□□□□□ -0.61
PRPF39-203ENST00000477626 SPDYE7PQ495Y7 208 aa11.22□□□□□ -0.61
PRPF39-203ENST00000477626 PODNL1Q6PEZ8 512 aa11.22□□□□□ -0.61
PRPF39-203ENST00000477626 Q6ZPB1 254 aaPredicted RBP11.22□□□□□ -0.61
PRPF39-203ENST00000477626 OR10G2Q8NGC3 310 aa11.22□□□□□ -0.61
PRPF39-203ENST00000477626 PIGKQ92643 395 aa11.22□□□□□ -0.61
PRPF39-203ENST00000477626 RIT1Q92963 219 aa11.22□□□□□ -0.61
PRPF39-203ENST00000477626 TSLPQ969D9 159 aa11.22□□□□□ -0.61
PRPF39-203ENST00000477626 UBE2FQ969M7 185 aa11.22□□□□□ -0.61
PRPF39-203ENST00000477626 REEP1Q9H902 201 aa11.22□□□□□ -0.61
PRPF39-203ENST00000477626 PRTFDC1Q9NRG1 225 aa11.22□□□□□ -0.61
PRPF39-203ENST00000477626 CALML5Q9NZT1 146 aa11.22□□□□□ -0.61
PRPF39-203ENST00000477626 DHCR7Q9UBM7 475 aaKnown RBP11.22□□□□□ -0.61
PRPF39-203ENST00000477626 DOLKQ9UPQ8 538 aa11.22□□□□□ -0.61
PRPF39-203ENST00000477626 NTNG1Q9Y2I2 539 aa11.22□□□□□ -0.61
PRPF39-203ENST00000477626 FAAHO00519 579 aa11.21□□□□□ -0.61
PRPF39-203ENST00000477626 CER1O95813 267 aa11.21□□□□□ -0.61
PRPF39-203ENST00000477626 PRG2P13727 222 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms