RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 GALNT10Q86SR1 603 aa16.13■□□□□ 0.17
PTPN7-209ENST00000477554 SLC34A3Q8N130 599 aa16.13■□□□□ 0.17
PTPN7-209ENST00000477554 OR2L13Q8N349 312 aa16.13■□□□□ 0.17
PTPN7-209ENST00000477554 FITM2Q8N6M3 262 aa16.13■□□□□ 0.17
PTPN7-209ENST00000477554 FBXO30Q8TB52 745 aa16.13■□□□□ 0.17
PTPN7-209ENST00000477554 ERP27Q96DN0 273 aa16.13■□□□□ 0.17
PTPN7-209ENST00000477554 HSPBAP1Q96EW2 488 aa16.13■□□□□ 0.17
PTPN7-209ENST00000477554 CCDC106Q9BWC9 280 aa16.13■□□□□ 0.17
PTPN7-209ENST00000477554 UBQLN3Q9H347 655 aa16.13■□□□□ 0.17
PTPN7-209ENST00000477554 EQTNQ9NQ60 294 aa16.13■□□□□ 0.17
PTPN7-209ENST00000477554 SH3BP4Q9P0V3 963 aa16.13■□□□□ 0.17
PTPN7-209ENST00000477554 ARMCX1Q9P291 453 aa16.13■□□□□ 0.17
PTPN7-209ENST00000477554 PRODH2Q9UF12 536 aa16.13■□□□□ 0.17
PTPN7-209ENST00000477554 PCNX3Q9H6A9 2034 aa16.13■□□□□ 0.17
PTPN7-209ENST00000477554 FBN2P35556 2912 aa16.13■□□□□ 0.17
PTPN7-209ENST00000477554 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.12■□□□□ 0.17
PTPN7-209ENST00000477554 GXYLT2A0PJZ3 443 aa16.12■□□□□ 0.17
PTPN7-209ENST00000477554 C19orf84I3L1E1 186 aa16.12■□□□□ 0.17
PTPN7-209ENST00000477554 ANKRD28O15084 1053 aa16.12■□□□□ 0.17
PTPN7-209ENST00000477554 ICOSLGO75144 302 aa16.12■□□□□ 0.17
PTPN7-209ENST00000477554 REM1O75628 298 aa16.12■□□□□ 0.17
PTPN7-209ENST00000477554 IGKV1D-16P01601 117 aa16.12■□□□□ 0.17
PTPN7-209ENST00000477554 NTSP30990 170 aa16.12■□□□□ 0.17
PTPN7-209ENST00000477554 HPCAL1P37235 193 aa16.12■□□□□ 0.17
PTPN7-209ENST00000477554 DCTP40126 519 aa16.12■□□□□ 0.17
PTPN7-209ENST00000477554 FRKP42685 505 aaPredicted RBP16.12■□□□□ 0.17
PTPN7-209ENST00000477554 NME5P56597 212 aa16.12■□□□□ 0.17
PTPN7-209ENST00000477554 UFM1P61960 85 aa16.12■□□□□ 0.17
PTPN7-209ENST00000477554 KLF10Q13118 480 aa16.12■□□□□ 0.17
PTPN7-209ENST00000477554 SLC10A1Q14973 349 aa16.12■□□□□ 0.17
PTPN7-209ENST00000477554 MAPRE2Q15555 327 aa16.12■□□□□ 0.17
PTPN7-209ENST00000477554 DPY19L1Q2PZI1 675 aa16.12■□□□□ 0.17
PTPN7-209ENST00000477554 GXYLT1Q4G148 440 aa16.12■□□□□ 0.17
PTPN7-209ENST00000477554 AGKQ53H12 422 aa16.12■□□□□ 0.17
PTPN7-209ENST00000477554 EIPR1Q53HC9 387 aa16.12■□□□□ 0.17
PTPN7-209ENST00000477554 DCST1Q5T197 706 aa16.12■□□□□ 0.17
PTPN7-209ENST00000477554 RTL6Q6ICC9 239 aa16.12■□□□□ 0.17
PTPN7-209ENST00000477554 ARHGAP11AQ6P4F7 1023 aa16.12■□□□□ 0.17
PTPN7-209ENST00000477554 PAOXQ6QHF9 649 aa16.12■□□□□ 0.17
PTPN7-209ENST00000477554 R3HCC1LQ7Z5L2 792 aaKnown RBP16.12■□□□□ 0.17
PTPN7-209ENST00000477554 PPCDCQ96CD2 204 aa16.12■□□□□ 0.17
PTPN7-209ENST00000477554 MTERF3Q96E29 417 aa16.12■□□□□ 0.17
PTPN7-209ENST00000477554 GIMAP5Q96F15 307 aa16.12■□□□□ 0.17
PTPN7-209ENST00000477554 PRPF18Q99633 342 aaKnown RBP16.12■□□□□ 0.17
PTPN7-209ENST00000477554 SIRT3Q9NTG7 399 aaPredicted RBP16.12■□□□□ 0.17
PTPN7-209ENST00000477554 CCDC167Q9P0B6 97 aa16.12■□□□□ 0.17
PTPN7-209ENST00000477554 CFL2Q9Y281 166 aa16.12■□□□□ 0.17
PTPN7-209ENST00000477554 SLC6A5Q9Y345 797 aa16.12■□□□□ 0.17
PTPN7-209ENST00000477554 DCHS2Q6V1P9 2916 aa16.12■□□□□ 0.17
PTPN7-209ENST00000477554 CSMD1Q96PZ7 3565 aa16.11■□□□□ 0.17
PTPN7-209ENST00000477554 A0A1B0GVC2 190 aa16.11■□□□□ 0.17
PTPN7-209ENST00000477554 FAM234BA2RU67 622 aa16.11■□□□□ 0.17
PTPN7-209ENST00000477554 ANKRD33BA6NCL7 494 aa16.11■□□□□ 0.17
PTPN7-209ENST00000477554 PLOD2O00469 737 aa16.11■□□□□ 0.17
PTPN7-209ENST00000477554 PRRG2O14669 202 aa16.11■□□□□ 0.17
PTPN7-209ENST00000477554 TP53I11O14683 189 aa16.11■□□□□ 0.17
PTPN7-209ENST00000477554 SCAMP2O15127 329 aaKnown RBP16.11■□□□□ 0.17
PTPN7-209ENST00000477554 ESRRAP11474 423 aaPredicted RBP16.11■□□□□ 0.17
PTPN7-209ENST00000477554 GDF1P27539 372 aa16.11■□□□□ 0.17
PTPN7-209ENST00000477554 PER3P56645 1201 aa16.11■□□□□ 0.17
PTPN7-209ENST00000477554 WNT3P56703 355 aa16.11■□□□□ 0.17
PTPN7-209ENST00000477554 GAB1Q13480 694 aa16.11■□□□□ 0.17
PTPN7-209ENST00000477554 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.11■□□□□ 0.17
PTPN7-209ENST00000477554 OR5M10Q6IEU7 315 aa16.11■□□□□ 0.17
PTPN7-209ENST00000477554 RIMKLAQ8IXN7 391 aa16.11■□□□□ 0.17
PTPN7-209ENST00000477554 DND1Q8IYX4 353 aaKnown RBP16.11■□□□□ 0.17
PTPN7-209ENST00000477554 SAMD14Q8IZD0 417 aaPredicted RBP16.11■□□□□ 0.17
PTPN7-209ENST00000477554 WDSUB1Q8N9V3 476 aa16.11■□□□□ 0.17
PTPN7-209ENST00000477554 PIK3R3Q92569 461 aa16.11■□□□□ 0.17
PTPN7-209ENST00000477554 TESCQ96BS2 214 aa16.11■□□□□ 0.17
PTPN7-209ENST00000477554 C16orf58Q96GQ5 468 aa16.11■□□□□ 0.17
PTPN7-209ENST00000477554 ZNF597Q96LX8 424 aa16.11■□□□□ 0.17
PTPN7-209ENST00000477554 METTL7AQ9H8H3 244 aa16.11■□□□□ 0.17
PTPN7-209ENST00000477554 DDX18Q9NVP1 670 aaKnown RBP16.11■□□□□ 0.17
PTPN7-209ENST00000477554 BOKQ9UMX3 212 aaPredicted RBP16.11■□□□□ 0.17
PTPN7-209ENST00000477554 FAM215AQ9Y5M1 114 aa16.11■□□□□ 0.17
PTPN7-209ENST00000477554 NUP214P35658 2090 aaPredicted RBP16.11■□□□□ 0.17
PTPN7-209ENST00000477554 A0A087WV62 115 aa16.11■□□□□ 0.17
PTPN7-209ENST00000477554 CCT8L1PA6NM43 557 aa16.11■□□□□ 0.17
PTPN7-209ENST00000477554 EBAG9O00559 213 aa16.11■□□□□ 0.17
PTPN7-209ENST00000477554 ACOX3O15254 700 aa16.11■□□□□ 0.17
PTPN7-209ENST00000477554 TBX19O60806 448 aa16.11■□□□□ 0.17
PTPN7-209ENST00000477554 CYP4B1P13584 511 aa16.11■□□□□ 0.17
PTPN7-209ENST00000477554 PTPN6P29350 595 aa16.11■□□□□ 0.17
PTPN7-209ENST00000477554 POLR2JP52435 117 aaKnown RBP16.11■□□□□ 0.17
PTPN7-209ENST00000477554 CASP6P55212 293 aa16.11■□□□□ 0.17
PTPN7-209ENST00000477554 ZNF585AQ6P3V2 769 aa16.11■□□□□ 0.17
PTPN7-209ENST00000477554 ANGPTL8Q6UXH0 198 aa16.11■□□□□ 0.17
PTPN7-209ENST00000477554 NUP54Q7Z3B4 507 aa16.11■□□□□ 0.17
PTPN7-209ENST00000477554 ZAR1Q86SH2 424 aa16.11■□□□□ 0.17
PTPN7-209ENST00000477554 TSPEARQ8WU66 669 aa16.11■□□□□ 0.17
PTPN7-209ENST00000477554 CMTM5Q96DZ9 223 aa16.11■□□□□ 0.17
PTPN7-209ENST00000477554 SLC35A4Q96G79 324 aa16.11■□□□□ 0.17
PTPN7-209ENST00000477554 TEX37Q96LM6 180 aa16.11■□□□□ 0.17
PTPN7-209ENST00000477554 COL21A1Q96P44 957 aa16.11■□□□□ 0.17
PTPN7-209ENST00000477554 YIPF4Q9BSR8 244 aa16.11■□□□□ 0.17
PTPN7-209ENST00000477554 LDAHQ9H6V9 325 aa16.11■□□□□ 0.17
PTPN7-209ENST00000477554 SERHLQ9NQF3 203 aa16.11■□□□□ 0.17
PTPN7-209ENST00000477554 ATP6V1HQ9UI12 483 aa16.11■□□□□ 0.17
PTPN7-209ENST00000477554 FBXL2Q9UKC9 423 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms