RNA–Protein interactions for RNA: ENST00000477528.5

HDAC6-220, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 4,832 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-220ENST00000477528 TTTY10Q9BZA0 68 aa13.76□□□□□ -0.21
HDAC6-220ENST00000477528 TMEM165Q9HC07 324 aa13.76□□□□□ -0.21
HDAC6-220ENST00000477528 DIABLOQ9NR28 239 aa13.76□□□□□ -0.21
HDAC6-220ENST00000477528 C2orf92A0A1B0GVN3 265 aa13.76□□□□□ -0.21
HDAC6-220ENST00000477528 ELAVL4P26378 380 aaKnown RBP13.76□□□□□ -0.21
HDAC6-220ENST00000477528 MAP2K3P46734 347 aa13.76□□□□□ -0.21
HDAC6-220ENST00000477528 CHRNEQ04844 493 aa13.76□□□□□ -0.21
HDAC6-220ENST00000477528 ANKRD34AQ69YU3 496 aa13.76□□□□□ -0.21
HDAC6-220ENST00000477528 TMEM179BQ7Z7N9 219 aa13.76□□□□□ -0.21
HDAC6-220ENST00000477528 GATSQ8NAP1 163 aa13.76□□□□□ -0.21
HDAC6-220ENST00000477528 RPLP0P6Q8NHW5 317 aa13.76□□□□□ -0.21
HDAC6-220ENST00000477528 PDXPQ96GD0 296 aa13.76□□□□□ -0.21
HDAC6-220ENST00000477528 LINC00615Q96LM1 132 aaPredicted RBP13.76□□□□□ -0.21
HDAC6-220ENST00000477528 PDCD10Q9BUL8 212 aa13.76□□□□□ -0.21
HDAC6-220ENST00000477528 KLK4Q9Y5K2 254 aa13.76□□□□□ -0.21
HDAC6-220ENST00000477528 A0A1W2PRQ8 180 aa13.76□□□□□ -0.21
HDAC6-220ENST00000477528 FAM172BPA6NC97 362 aa13.76□□□□□ -0.21
HDAC6-220ENST00000477528 MAN2B1O00754 1011 aa13.76□□□□□ -0.21
HDAC6-220ENST00000477528 CPMP14384 443 aa13.76□□□□□ -0.21
HDAC6-220ENST00000477528 CFL1P23528 166 aaKnown RBP13.76□□□□□ -0.21
HDAC6-220ENST00000477528 PKLRP30613 574 aa13.76□□□□□ -0.21
HDAC6-220ENST00000477528 OR12D2P58182 307 aa13.76□□□□□ -0.21
HDAC6-220ENST00000477528 ACTA2P62736 377 aa13.76□□□□□ -0.21
HDAC6-220ENST00000477528 ACTG2P63267 376 aa13.76□□□□□ -0.21
HDAC6-220ENST00000477528 HOXC5Q00444 222 aa13.76□□□□□ -0.21
HDAC6-220ENST00000477528 PUS10Q3MIT2 529 aaKnown RBP13.76□□□□□ -0.21
HDAC6-220ENST00000477528 ENTPD8Q5MY95 495 aa13.76□□□□□ -0.21
HDAC6-220ENST00000477528 DCST2Q5T1A1 773 aa13.76□□□□□ -0.21
HDAC6-220ENST00000477528 PIP5KL1Q5T9C9 394 aa13.76□□□□□ -0.21
HDAC6-220ENST00000477528 SLC46A3Q7Z3Q1 461 aa13.76□□□□□ -0.21
HDAC6-220ENST00000477528 C12orf40Q86WS4 652 aa13.76□□□□□ -0.21
HDAC6-220ENST00000477528 ZNF761Q86XN6 746 aaPredicted RBP13.76□□□□□ -0.21
HDAC6-220ENST00000477528 RBM12BQ8IXT5 1001 aaKnown RBP13.76□□□□□ -0.21
HDAC6-220ENST00000477528 TGM7Q96PF1 710 aa13.76□□□□□ -0.21
HDAC6-220ENST00000477528 TM9SF2Q99805 663 aa13.76□□□□□ -0.21
HDAC6-220ENST00000477528 WDR37Q9Y2I8 494 aa13.76□□□□□ -0.21
HDAC6-220ENST00000477528 A0A1W2PQL4 384 aaPredicted RBP13.75□□□□□ -0.21
HDAC6-220ENST00000477528 A8MU76 341 aa13.75□□□□□ -0.21
HDAC6-220ENST00000477528 GAPDHSO14556 408 aaPredicted RBP13.75□□□□□ -0.21
HDAC6-220ENST00000477528 KHNYNO15037 678 aaKnown RBP13.75□□□□□ -0.21
HDAC6-220ENST00000477528 PRAMEF2O60811 474 aa13.75□□□□□ -0.21
HDAC6-220ENST00000477528 MAP3K8P41279 467 aa13.75□□□□□ -0.21
HDAC6-220ENST00000477528 TSPAN31Q12999 210 aa13.75□□□□□ -0.21
HDAC6-220ENST00000477528 DEFB110Q30KQ9 67 aa13.75□□□□□ -0.21
HDAC6-220ENST00000477528 INAVAQ3KP66 663 aa13.75□□□□□ -0.21
HDAC6-220ENST00000477528 ABHD17CQ6PCB6 329 aa13.75□□□□□ -0.21
HDAC6-220ENST00000477528 DNM1P34Q6PK57 102 aa13.75□□□□□ -0.21
HDAC6-220ENST00000477528 NLRP8Q86W28 1048 aa13.75□□□□□ -0.21
HDAC6-220ENST00000477528 MEX3DQ86XN8 651 aaKnown RBP13.75□□□□□ -0.21
HDAC6-220ENST00000477528 VWA5B2Q8N398 1253 aa13.75□□□□□ -0.21
HDAC6-220ENST00000477528 MS4A15Q8N5U1 240 aa13.75□□□□□ -0.21
HDAC6-220ENST00000477528 GDPD1Q8N9F7 314 aa13.75□□□□□ -0.21
HDAC6-220ENST00000477528 C7orf57Q8NEG2 295 aa13.75□□□□□ -0.21
HDAC6-220ENST00000477528 ADAMTS19Q8TE59 1207 aa13.75□□□□□ -0.21
HDAC6-220ENST00000477528 OMA1Q96E52 524 aa13.75□□□□□ -0.21
HDAC6-220ENST00000477528 OR52A5Q9H2C5 316 aa13.75□□□□□ -0.21
HDAC6-220ENST00000477528 ZNF443Q9Y2A4 671 aaPredicted RBP13.75□□□□□ -0.21
HDAC6-220ENST00000477528 CSNK1G3Q9Y6M4 447 aa13.75□□□□□ -0.21
HDAC6-220ENST00000477528 AHSA1O95433 338 aa13.75□□□□□ -0.21
HDAC6-220ENST00000477528 PTHP01270 115 aa13.75□□□□□ -0.21
HDAC6-220ENST00000477528 TSFMP43897 325 aaKnown RBP13.75□□□□□ -0.21
HDAC6-220ENST00000477528 GBX1Q14549 363 aa13.75□□□□□ -0.21
HDAC6-220ENST00000477528 USP51Q70EK9 711 aa13.75□□□□□ -0.21
HDAC6-220ENST00000477528 MSRB3Q8IXL7 192 aa13.75□□□□□ -0.21
HDAC6-220ENST00000477528 ZNF566Q969W8 418 aa13.75□□□□□ -0.21
HDAC6-220ENST00000477528 RFT1Q96AA3 541 aa13.75□□□□□ -0.21
HDAC6-220ENST00000477528 C16orf58Q96GQ5 468 aa13.75□□□□□ -0.21
HDAC6-220ENST00000477528 DUSP21Q9H596 190 aa13.75□□□□□ -0.21
HDAC6-220ENST00000477528 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.75□□□□□ -0.21
HDAC6-220ENST00000477528 OR2A25A4D2G3 310 aa13.75□□□□□ -0.21
HDAC6-220ENST00000477528 C12orf71A8MTZ7 269 aa13.75□□□□□ -0.21
HDAC6-220ENST00000477528 NAA10P41227 235 aaPredicted RBP13.75□□□□□ -0.21
HDAC6-220ENST00000477528 ARRB1P49407 418 aaPredicted RBP13.75□□□□□ -0.21
HDAC6-220ENST00000477528 PHC1P78364 1004 aa13.75□□□□□ -0.21
HDAC6-220ENST00000477528 NKG7Q16617 165 aa13.75□□□□□ -0.21
HDAC6-220ENST00000477528 SAXO2Q658L1 398 aa13.75□□□□□ -0.21
HDAC6-220ENST00000477528 WDR53Q7Z5U6 358 aaPredicted RBP13.75□□□□□ -0.21
HDAC6-220ENST00000477528 CHPT1Q8WUD6 406 aa13.75□□□□□ -0.21
HDAC6-220ENST00000477528 THEM6Q8WUY1 208 aa13.75□□□□□ -0.21
HDAC6-220ENST00000477528 UBE2FQ969M7 185 aa13.75□□□□□ -0.21
HDAC6-220ENST00000477528 KLHL21Q9UJP4 597 aa13.75□□□□□ -0.21
HDAC6-220ENST00000477528 ACP2P11117 423 aa13.75□□□□□ -0.21
HDAC6-220ENST00000477528 TNFRSF17Q02223 184 aa13.75□□□□□ -0.21
HDAC6-220ENST00000477528 NLGN4XQ8N0W4 816 aa13.75□□□□□ -0.21
HDAC6-220ENST00000477528 CNN2Q99439 309 aaKnown RBP13.75□□□□□ -0.21
HDAC6-220ENST00000477528 GABARAPL3Q9BY60 117 aa13.75□□□□□ -0.21
HDAC6-220ENST00000477528 MBNL1Q9NR56 388 aaKnown RBP13.75□□□□□ -0.21
HDAC6-220ENST00000477528 LAMP5Q9UJQ1 280 aa13.75□□□□□ -0.21
HDAC6-220ENST00000477528 PLXNA1Q9UIW2 1896 aa13.74□□□□□ -0.21
HDAC6-220ENST00000477528 TSPAN11A1L157 253 aa13.74□□□□□ -0.21
HDAC6-220ENST00000477528 SYT5O00445 386 aa13.74□□□□□ -0.21
HDAC6-220ENST00000477528 LDB3O75112 727 aa13.74□□□□□ -0.21
HDAC6-220ENST00000477528 UGT2B10P36537 528 aa13.74□□□□□ -0.21
HDAC6-220ENST00000477528 BCL6P41182 706 aa13.74□□□□□ -0.21
HDAC6-220ENST00000477528 MASP1P48740 699 aa13.74□□□□□ -0.21
HDAC6-220ENST00000477528 MAB21L1Q13394 359 aa13.74□□□□□ -0.21
HDAC6-220ENST00000477528 TCTE1Q5JU00 501 aa13.74□□□□□ -0.21
HDAC6-220ENST00000477528 LINC00299Q6ZSB3 139 aa13.74□□□□□ -0.21
HDAC6-220ENST00000477528 HDDC2Q7Z4H3 204 aa13.74□□□□□ -0.21
HDAC6-220ENST00000477528 PEG10Q86TG7 708 aaKnown RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms