RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 TSPAN2O60636 221 aa6□□□□□ -1.45
RTFDC1-206ENST00000477485 SMIM24O75264 130 aa6□□□□□ -1.45
RTFDC1-206ENST00000477485 TNFRSF21O75509 655 aa6□□□□□ -1.45
RTFDC1-206ENST00000477485 BCAS2O75934 225 aaPredicted RBP6□□□□□ -1.45
RTFDC1-206ENST00000477485 SYNGR4O95473 234 aa6□□□□□ -1.45
RTFDC1-206ENST00000477485 PDYNP01213 254 aa6□□□□□ -1.45
RTFDC1-206ENST00000477485 OPN1LWP04000 364 aa6□□□□□ -1.45
RTFDC1-206ENST00000477485 C2P06681 752 aa6□□□□□ -1.45
RTFDC1-206ENST00000477485 THBDP07204 575 aa6□□□□□ -1.45
RTFDC1-206ENST00000477485 PPP3CBP16298 524 aa6□□□□□ -1.45
RTFDC1-206ENST00000477485 TSPAN8P19075 237 aa6□□□□□ -1.45
RTFDC1-206ENST00000477485 LOXP28300 417 aaPredicted RBP6□□□□□ -1.45
RTFDC1-206ENST00000477485 TYK2P29597 1187 aa6□□□□□ -1.45
RTFDC1-206ENST00000477485 STX2P32856 288 aa6□□□□□ -1.45
RTFDC1-206ENST00000477485 IDUAP35475 653 aa6□□□□□ -1.45
RTFDC1-206ENST00000477485 ACVR1BP36896 505 aa6□□□□□ -1.45
RTFDC1-206ENST00000477485 CLK3P49761 638 aaKnown RBP6□□□□□ -1.45
RTFDC1-206ENST00000477485 B3GALT5-AS1P59052 145 aa6□□□□□ -1.45
RTFDC1-206ENST00000477485 KRTAP1-1Q07627 177 aa6□□□□□ -1.45
RTFDC1-206ENST00000477485 MGAT2Q10469 447 aa6□□□□□ -1.45
RTFDC1-206ENST00000477485 ACAP2Q15057 778 aa6□□□□□ -1.45
RTFDC1-206ENST00000477485 BCL2A1Q16548 175 aa6□□□□□ -1.45
RTFDC1-206ENST00000477485 CTU2Q2VPK5 515 aaKnown RBP6□□□□□ -1.45
RTFDC1-206ENST00000477485 HEPHL1Q6MZM0 1159 aa6□□□□□ -1.45
RTFDC1-206ENST00000477485 NPSR1Q6W5P4 371 aa6□□□□□ -1.45
RTFDC1-206ENST00000477485 RPS27LQ71UM5 84 aaKnown RBP6□□□□□ -1.45
RTFDC1-206ENST00000477485 FAM214BQ7L5A3 538 aa6□□□□□ -1.45
RTFDC1-206ENST00000477485 MILR1Q7Z6M3 343 aa6□□□□□ -1.45
RTFDC1-206ENST00000477485 STK32CQ86UX6 486 aa6□□□□□ -1.45
RTFDC1-206ENST00000477485 CENPLQ8N0S6 344 aaPredicted RBP6□□□□□ -1.45
RTFDC1-206ENST00000477485 METTL4Q8N3J2 472 aa6□□□□□ -1.45
RTFDC1-206ENST00000477485 C1orf52Q8N6N3 182 aaKnown RBP6□□□□□ -1.45
RTFDC1-206ENST00000477485 ZNF611Q8N823 705 aa6□□□□□ -1.45
RTFDC1-206ENST00000477485 L3MBTL4Q8NA19 623 aa6□□□□□ -1.45
RTFDC1-206ENST00000477485 OR2M3Q8NG83 312 aa6□□□□□ -1.45
RTFDC1-206ENST00000477485 OR4F6Q8NGB9 312 aa6□□□□□ -1.45
RTFDC1-206ENST00000477485 OR4N2Q8NGD1 307 aa6□□□□□ -1.45
RTFDC1-206ENST00000477485 RHEBL1Q8TAI7 183 aa6□□□□□ -1.45
RTFDC1-206ENST00000477485 UHMK1Q8TAS1 419 aaKnown RBP6□□□□□ -1.45
RTFDC1-206ENST00000477485 RAB3IL1Q8TBN0 382 aa6□□□□□ -1.45
RTFDC1-206ENST00000477485 CAVIN3Q969G5 261 aa6□□□□□ -1.45
RTFDC1-206ENST00000477485 FBXW5Q969U6 566 aa6□□□□□ -1.45
RTFDC1-206ENST00000477485 MTBPQ96DY7 904 aa6□□□□□ -1.45
RTFDC1-206ENST00000477485 CNRIP1Q96F85 164 aaPredicted RBP6□□□□□ -1.45
RTFDC1-206ENST00000477485 ZBED6CLQ96FA7 236 aaPredicted RBP6□□□□□ -1.45
RTFDC1-206ENST00000477485 SLC35A4Q96G79 324 aa6□□□□□ -1.45
RTFDC1-206ENST00000477485 HS6ST2Q96MM7 605 aa6□□□□□ -1.45
RTFDC1-206ENST00000477485 NSUN5Q96P11 429 aaKnown RBP6□□□□□ -1.45
RTFDC1-206ENST00000477485 LRRC1Q9BTT6 524 aa6□□□□□ -1.45
RTFDC1-206ENST00000477485 ALG2Q9H553 416 aa6□□□□□ -1.45
RTFDC1-206ENST00000477485 RNF122Q9H9V4 155 aa6□□□□□ -1.45
RTFDC1-206ENST00000477485 FARSBQ9NSD9 589 aaKnown RBP6□□□□□ -1.45
RTFDC1-206ENST00000477485 NMRK1Q9NWW6 199 aa6□□□□□ -1.45
RTFDC1-206ENST00000477485 PSD3Q9NYI0 1048 aa6□□□□□ -1.45
RTFDC1-206ENST00000477485 TAS2R9Q9NYW1 312 aa6□□□□□ -1.45
RTFDC1-206ENST00000477485 ZNF639Q9UID6 485 aa6□□□□□ -1.45
RTFDC1-206ENST00000477485 CES1P1Q9UKY3 287 aa6□□□□□ -1.45
RTFDC1-206ENST00000477485 MCTS1Q9ULC4 181 aaKnown RBP6□□□□□ -1.45
RTFDC1-206ENST00000477485 VDAC3Q9Y277 283 aa6□□□□□ -1.45
RTFDC1-206ENST00000477485 GPR55Q9Y2T6 319 aaPredicted RBP6□□□□□ -1.45
RTFDC1-206ENST00000477485 ZNF175Q9Y473 711 aa6□□□□□ -1.45
RTFDC1-206ENST00000477485 PRR14LQ5THK1 2151 aa6□□□□□ -1.45
RTFDC1-206ENST00000477485 DNHD1Q96M86 4753 aa5.99□□□□□ -1.45
RTFDC1-206ENST00000477485 YLPM1P49750 1951 aaKnown RBP5.99□□□□□ -1.45
RTFDC1-206ENST00000477485 A8MV72 311 aaPredicted RBP5.99□□□□□ -1.45
RTFDC1-206ENST00000477485 B4DXG7 233 aa5.99□□□□□ -1.45
RTFDC1-206ENST00000477485 TO15178 435 aa5.99□□□□□ -1.45
RTFDC1-206ENST00000477485 TP73O15350 636 aa5.99□□□□□ -1.45
RTFDC1-206ENST00000477485 EIF3HO15372 352 aaKnown RBP eCLIP5.99□□□□□ -1.45
RTFDC1-206ENST00000477485 KLF4O43474 513 aa5.99□□□□□ -1.45
RTFDC1-206ENST00000477485 TLX2O43763 284 aaPredicted RBP5.99□□□□□ -1.45
RTFDC1-206ENST00000477485 SSX4O60224 188 aa5.99□□□□□ -1.45
RTFDC1-206ENST00000477485 PCDH7O60245 1069 aa5.99□□□□□ -1.45
RTFDC1-206ENST00000477485 ADAM11O75078 769 aa5.99□□□□□ -1.45
RTFDC1-206ENST00000477485 AQP8O94778 261 aa5.99□□□□□ -1.45
RTFDC1-206ENST00000477485 KLHL2O95198 593 aa5.99□□□□□ -1.45
RTFDC1-206ENST00000477485 CGAP01215 116 aa5.99□□□□□ -1.45
RTFDC1-206ENST00000477485 CD3EP07766 207 aa5.99□□□□□ -1.45
RTFDC1-206ENST00000477485 IL3P08700 152 aa5.99□□□□□ -1.45
RTFDC1-206ENST00000477485 GSTA2P09210 222 aa5.99□□□□□ -1.45
RTFDC1-206ENST00000477485 CT45A8P0DMV1 189 aa5.99□□□□□ -1.45
RTFDC1-206ENST00000477485 CT45A9P0DMV2 189 aa5.99□□□□□ -1.45
RTFDC1-206ENST00000477485 IL32P24001 234 aa5.99□□□□□ -1.45
RTFDC1-206ENST00000477485 SERPINB8P50452 374 aa5.99□□□□□ -1.45
RTFDC1-206ENST00000477485 PNLIPRP2P54317 469 aa5.99□□□□□ -1.45
RTFDC1-206ENST00000477485 PLTPP55058 493 aa5.99□□□□□ -1.45
RTFDC1-206ENST00000477485 GANABQ14697 944 aaKnown RBP5.99□□□□□ -1.45
RTFDC1-206ENST00000477485 TSC22D1Q15714 1073 aa5.99□□□□□ -1.45
RTFDC1-206ENST00000477485 CT45A2Q5DJT8 189 aa5.99□□□□□ -1.45
RTFDC1-206ENST00000477485 ZNF628Q5EBL2 1059 aa5.99□□□□□ -1.45
RTFDC1-206ENST00000477485 TEX35Q5T0J7 233 aa5.99□□□□□ -1.45
RTFDC1-206ENST00000477485 FAM219BQ5XKK7 198 aa5.99□□□□□ -1.45
RTFDC1-206ENST00000477485 BEND4Q6ZU67 534 aa5.99□□□□□ -1.45
RTFDC1-206ENST00000477485 SH2D5Q6ZV89 423 aa5.99□□□□□ -1.45
RTFDC1-206ENST00000477485 MARCH3Q86UD3 253 aa5.99□□□□□ -1.45
RTFDC1-206ENST00000477485 HIPK1Q86Z02 1210 aa5.99□□□□□ -1.45
RTFDC1-206ENST00000477485 FAM9CQ8IZT9 166 aa5.99□□□□□ -1.45
RTFDC1-206ENST00000477485 OR6K3Q8NGY3 331 aa5.99□□□□□ -1.45
RTFDC1-206ENST00000477485 TRPC4APQ8TEL6 797 aa5.99□□□□□ -1.45
RTFDC1-206ENST00000477485 DUSP19Q8WTR2 217 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms